BacMap

Definition	Shewanella baltica OS195 chromosome, complete genome.
Accession	NC_009997
Length	5,347,283

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The map label for this gene is gabD [H]

Identifier: 160874323

GI number: 160874323

Start: 1428183

End: 1429631

Strand: Direct

Name: gabD [H]

Synonym: Sbal195_1204

Alternate gene names: 160874323

Gene position: 1428183-1429631 (Clockwise)

Preceding gene: 160874322

Following gene: 160874324

Centisome position: 26.71

GC content: 49.28

Gene sequence:

>1449_bases
GTGCAATTAAATGATCCGAGTTTGCTACATCAACAGTCTTTTATTAATGGTCAATGGTGTGATGCCGTTTCTGGTGACAC
GTTAAAGGTGGTTAATCCCGCAACCAATGCCCTGATTGGTCATGTTCCTAATATGGGACAAGTTGAAACCGAGATGGCGA
TTAAGGCGGCAGAAGCGGCTTTACCTGCATGGCGAGCGCTCACAGCCAAAGAGCGCGGCGCTAAGTTAAGGCGTTGGTTT
GAATTACTCAATGAAAACAGTGATGACTTAGCATTGCTCATGACGACTGAGCAGGGTAAACCGCTGGCAGAAGCTAAAGG
TGAAGTAACCTATGCCGCTTCGTTTATCGAGTGGTTTGCCGAAGAAGCGAAACGTATTTATGGCGATACCATTCCCGGAC
ATCAAGGGGATAAGCGCTTGATGGTGATCAAGCAGCCTGTCGGTGTAACCGCTGCGATAACGCCGTGGAACTTTCCTGCG
GCGATGATCACCCGTAAAGCCGCTCCAGCGTTAGCTGCTGGTTGCACTATGGTGGTAAAACCGGCGCACCAAACACCATT
TACCGCATTAGCGATGGCTGAACTCGCTAAGCGTGCCGGTATTCCTGCGGGCGTATTTAGTGTGTTAACGGGTGATGCGG
TGCAGATTGGTAATGAAATGTGCAGCAACCCGATAGTGCGTAAGCTGTCTTTCACTGGCTCAACCAATATCGGTATTAAA
TTAATGGCGCAATGTGCGCCTACCTTAAAAAAACTGTCGCTAGAGCTTGGCGGCAATGCGCCATTTATCGTGTTTAATGA
TGCCAATATCGATGCCGCTGTCGAAGGCGCTATGATTGCTAAATATCGTAATGCTGGCCAAACCTGCGTCTGCGCTAACC
GCATTTATGTGCAAGACGGTGTATACGACGAGTTCGCCTTAAAACTCAGCACTGCAGTGGGCAAGCTTAAGGTTGGAGAG
GGCATCAAGGAGGGCATCACTACGGGTCCGTTGATCAATGCTGCCGCAGTCGAAAAAGTGCAAAGTCATCTTATCGACGC
CATAGCTAAAGGTGCATCTGTGCTCGCAGGCGGTAAAGTCCACGACCTTGGCGGTAATTTCTTCGAGCCAACCGTGCTGA
CTAACGTTAATAAAAGCATGCTCGTTGCCCGCGAAGAAACCTTTGGTCCACTCGCGCCGCTGTTTAAATTCAGCGATGTC
GACGATGTGATTAAACAAGCTAACGATACTGAATTTGGCCTTGCCGCTTATTTCTATGGCCGCGATATTTCACTGGTGTG
GAAAGTCGCCGAAGCCTTGGAATACGGCATGGTTGGGGTCAACACTGGCTTGATTTCGACGGAAGTCGCACCCTTTGGCG
GGATGAAATCCTCTGGACTGGGCCGCGAAGGTTCTAAGTACGGCATCGAAGAATATTTAGAAATGAAGTACATCTGCATG
TCCGTTTAA

Upstream 100 bases:

>100_bases
GTGCTATCGGAGCTTGGTATTACACGTTAAGAGACAAACTGGGTCTCTAATATCATCACTTTTAAGAAGCTAGGTAGCTT
CACAATACGAGGAAATCCTT

Downstream 100 bases:

>100_bases
TACGGTCCGATTTGGCGTGTGAGGAACACTAAATGACAACAACCAATGATTCATTGATGGCACGTCGCCAAGCCGCAGTT
GCGGGTGGTGTCGGGCAAAT

Product: succinic semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MQLNDPSLLHQQSFINGQWCDAVSGDTLKVVNPATNALIGHVPNMGQVETEMAIKAAEAALPAWRALTAKERGAKLRRWF
ELLNENSDDLALLMTTEQGKPLAEAKGEVTYAASFIEWFAEEAKRIYGDTIPGHQGDKRLMVIKQPVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAHQTPFTALAMAELAKRAGIPAGVFSVLTGDAVQIGNEMCSNPIVRKLSFTGSTNIGIK
LMAQCAPTLKKLSLELGGNAPFIVFNDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQDGVYDEFALKLSTAVGKLKVGE
GIKEGITTGPLINAAAVEKVQSHLIDAIAKGASVLAGGKVHDLGGNFFEPTVLTNVNKSMLVAREETFGPLAPLFKFSDV
DDVIKQANDTEFGLAAYFYGRDISLVWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIEEYLEMKYICM
SV

Sequences:

>Translated_482_residues
MQLNDPSLLHQQSFINGQWCDAVSGDTLKVVNPATNALIGHVPNMGQVETEMAIKAAEAALPAWRALTAKERGAKLRRWF
ELLNENSDDLALLMTTEQGKPLAEAKGEVTYAASFIEWFAEEAKRIYGDTIPGHQGDKRLMVIKQPVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAHQTPFTALAMAELAKRAGIPAGVFSVLTGDAVQIGNEMCSNPIVRKLSFTGSTNIGIK
LMAQCAPTLKKLSLELGGNAPFIVFNDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQDGVYDEFALKLSTAVGKLKVGE
GIKEGITTGPLINAAAVEKVQSHLIDAIAKGASVLAGGKVHDLGGNFFEPTVLTNVNKSMLVAREETFGPLAPLFKFSDV
DDVIKQANDTEFGLAAYFYGRDISLVWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIEEYLEMKYICM
SV
>Mature_482_residues
MQLNDPSLLHQQSFINGQWCDAVSGDTLKVVNPATNALIGHVPNMGQVETEMAIKAAEAALPAWRALTAKERGAKLRRWF
ELLNENSDDLALLMTTEQGKPLAEAKGEVTYAASFIEWFAEEAKRIYGDTIPGHQGDKRLMVIKQPVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAHQTPFTALAMAELAKRAGIPAGVFSVLTGDAVQIGNEMCSNPIVRKLSFTGSTNIGIK
LMAQCAPTLKKLSLELGGNAPFIVFNDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQDGVYDEFALKLSTAVGKLKVGE
GIKEGITTGPLINAAAVEKVQSHLIDAIAKGASVLAGGKVHDLGGNFFEPTVLTNVNKSMLVAREETFGPLAPLFKFSDV
DDVIKQANDTEFGLAAYFYGRDISLVWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIEEYLEMKYICM
SV

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=477, Percent_Identity=55.1362683438155, Blast_Score=529, Evalue=1e-150,
Organism=Homo sapiens, GI25777721, Length=490, Percent_Identity=53.469387755102, Blast_Score=519, Evalue=1e-147,
Organism=Homo sapiens, GI238814322, Length=478, Percent_Identity=38.4937238493724, Blast_Score=323, Evalue=2e-88,
Organism=Homo sapiens, GI25777730, Length=484, Percent_Identity=38.4297520661157, Blast_Score=320, Evalue=1e-87,
Organism=Homo sapiens, GI21614513, Length=478, Percent_Identity=37.2384937238494, Blast_Score=311, Evalue=1e-84,
Organism=Homo sapiens, GI21361176, Length=486, Percent_Identity=37.2427983539095, Blast_Score=310, Evalue=1e-84,
Organism=Homo sapiens, GI153266822, Length=475, Percent_Identity=37.4736842105263, Blast_Score=307, Evalue=2e-83,
Organism=Homo sapiens, GI25777724, Length=479, Percent_Identity=36.1169102296451, Blast_Score=302, Evalue=4e-82,
Organism=Homo sapiens, GI25777732, Length=487, Percent_Identity=36.3449691991786, Blast_Score=302, Evalue=5e-82,
Organism=Homo sapiens, GI12007648, Length=480, Percent_Identity=35.2083333333333, Blast_Score=301, Evalue=9e-82,
Organism=Homo sapiens, GI115387104, Length=465, Percent_Identity=35.0537634408602, Blast_Score=290, Evalue=2e-78,
Organism=Homo sapiens, GI25777728, Length=419, Percent_Identity=36.9928400954654, Blast_Score=271, Evalue=8e-73,
Organism=Homo sapiens, GI25777726, Length=479, Percent_Identity=32.9853862212944, Blast_Score=262, Evalue=5e-70,
Organism=Homo sapiens, GI25952152, Length=480, Percent_Identity=31.0416666666667, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI301500698, Length=482, Percent_Identity=30.9128630705394, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI11095441, Length=473, Percent_Identity=30.4439746300211, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI310128103, Length=472, Percent_Identity=29.4491525423729, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI188035924, Length=472, Percent_Identity=29.4491525423729, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI310128093, Length=470, Percent_Identity=29.7872340425532, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI310128091, Length=470, Percent_Identity=28.2978723404255, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI310128089, Length=323, Percent_Identity=30.6501547987616, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI223972651, Length=464, Percent_Identity=26.5086206896552, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI310128097, Length=256, Percent_Identity=32.03125, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI73466520, Length=330, Percent_Identity=28.4848484848485, Blast_Score=139, Evalue=8e-33,
Organism=Homo sapiens, GI4557303, Length=330, Percent_Identity=28.4848484848485, Blast_Score=138, Evalue=9e-33,
Organism=Homo sapiens, GI206597441, Length=427, Percent_Identity=26.9320843091335, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI206597439, Length=427, Percent_Identity=26.9320843091335, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI22907049, Length=427, Percent_Identity=26.9320843091335, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI310128095, Length=284, Percent_Identity=29.9295774647887, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4502043, Length=434, Percent_Identity=26.2672811059908, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI238814371, Length=434, Percent_Identity=26.2672811059908, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI73695881, Length=337, Percent_Identity=28.486646884273, Blast_Score=129, Evalue=8e-30,
Organism=Homo sapiens, GI73695879, Length=337, Percent_Identity=28.486646884273, Blast_Score=129, Evalue=8e-30,
Organism=Homo sapiens, GI71773324, Length=362, Percent_Identity=27.0718232044199, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI238859541, Length=432, Percent_Identity=26.1574074074074, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI25777736, Length=432, Percent_Identity=26.1574074074074, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI25777734, Length=432, Percent_Identity=26.1574074074074, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI310128087, Length=290, Percent_Identity=29.6551724137931, Blast_Score=115, Evalue=9e-26,
Organism=Homo sapiens, GI223972653, Length=464, Percent_Identity=23.9224137931034, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI310128099, Length=241, Percent_Identity=29.045643153527, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI310128101, Length=241, Percent_Identity=29.045643153527, Blast_Score=86, Evalue=6e-17,
Organism=Escherichia coli, GI1789015, Length=482, Percent_Identity=70.3319502074689, Blast_Score=723, Evalue=0.0,
Organism=Escherichia coli, GI1787684, Length=469, Percent_Identity=37.1002132196162, Blast_Score=333, Evalue=1e-92,
Organism=Escherichia coli, GI87081896, Length=481, Percent_Identity=35.7588357588358, Blast_Score=287, Evalue=1e-78,
Organism=Escherichia coli, GI1786504, Length=479, Percent_Identity=35.2818371607516, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1787715, Length=476, Percent_Identity=35.7142857142857, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1787558, Length=484, Percent_Identity=31.6115702479339, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI87081926, Length=448, Percent_Identity=33.7053571428571, Blast_Score=254, Evalue=6e-69,
Organism=Escherichia coli, GI87082295, Length=488, Percent_Identity=30.327868852459, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1788042, Length=460, Percent_Identity=30.8695652173913, Blast_Score=186, Evalue=4e-48,
Organism=Escherichia coli, GI1787250, Length=457, Percent_Identity=27.7899343544858, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI1787653, Length=365, Percent_Identity=27.1232876712329, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17534119, Length=473, Percent_Identity=46.9344608879493, Blast_Score=425, Evalue=1e-119,
Organism=Caenorhabditis elegans, GI133930964, Length=489, Percent_Identity=39.2638036809816, Blast_Score=338, Evalue=5e-93,
Organism=Caenorhabditis elegans, GI17562198, Length=476, Percent_Identity=37.3949579831933, Blast_Score=308, Evalue=3e-84,
Organism=Caenorhabditis elegans, GI25144435, Length=474, Percent_Identity=35.6540084388186, Blast_Score=299, Evalue=3e-81,
Organism=Caenorhabditis elegans, GI25143876, Length=483, Percent_Identity=35.8178053830228, Blast_Score=285, Evalue=4e-77,
Organism=Caenorhabditis elegans, GI25143874, Length=482, Percent_Identity=35.8921161825726, Blast_Score=284, Evalue=6e-77,
Organism=Caenorhabditis elegans, GI32564736, Length=418, Percent_Identity=36.1244019138756, Blast_Score=267, Evalue=1e-71,
Organism=Caenorhabditis elegans, GI71995606, Length=479, Percent_Identity=33.1941544885177, Blast_Score=254, Evalue=7e-68,
Organism=Caenorhabditis elegans, GI17551164, Length=489, Percent_Identity=31.4928425357873, Blast_Score=232, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI71995613, Length=412, Percent_Identity=33.0097087378641, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI115534176, Length=469, Percent_Identity=30.9168443496802, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI71986308, Length=472, Percent_Identity=29.6610169491525, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI25146391, Length=337, Percent_Identity=30.5637982195846, Blast_Score=141, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI32566756, Length=337, Percent_Identity=30.5637982195846, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI25146394, Length=337, Percent_Identity=30.5637982195846, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17564084, Length=424, Percent_Identity=27.3584905660377, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17534447, Length=446, Percent_Identity=27.1300448430493, Blast_Score=125, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI115532534, Length=351, Percent_Identity=27.9202279202279, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI32564151, Length=399, Percent_Identity=26.8170426065163, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI71990744, Length=284, Percent_Identity=26.4084507042254, Blast_Score=76, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6319478, Length=481, Percent_Identity=50.5197505197505, Blast_Score=494, Evalue=1e-140,
Organism=Saccharomyces cerevisiae, GI6320917, Length=470, Percent_Identity=35.531914893617, Blast_Score=300, Evalue=4e-82,
Organism=Saccharomyces cerevisiae, GI6324950, Length=468, Percent_Identity=34.6153846153846, Blast_Score=294, Evalue=2e-80,
Organism=Saccharomyces cerevisiae, GI6323821, Length=481, Percent_Identity=34.0956340956341, Blast_Score=276, Evalue=6e-75,
Organism=Saccharomyces cerevisiae, GI6323822, Length=485, Percent_Identity=34.020618556701, Blast_Score=276, Evalue=8e-75,
Organism=Saccharomyces cerevisiae, GI6325196, Length=472, Percent_Identity=35.1694915254237, Blast_Score=274, Evalue=2e-74,
Organism=Saccharomyces cerevisiae, GI6321828, Length=473, Percent_Identity=25.7928118393235, Blast_Score=160, Evalue=6e-40,
Organism=Saccharomyces cerevisiae, GI6321826, Length=431, Percent_Identity=24.5939675174014, Blast_Score=100, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6323757, Length=331, Percent_Identity=25.3776435045317, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281362580, Length=479, Percent_Identity=50.5219206680584, Blast_Score=495, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472918, Length=479, Percent_Identity=50.5219206680584, Blast_Score=495, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472926, Length=479, Percent_Identity=50.5219206680584, Blast_Score=495, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472936, Length=479, Percent_Identity=50.5219206680584, Blast_Score=495, Evalue=1e-140,
Organism=Drosophila melanogaster, GI21356737, Length=479, Percent_Identity=50.5219206680584, Blast_Score=495, Evalue=1e-140,
Organism=Drosophila melanogaster, GI24650465, Length=477, Percent_Identity=40.251572327044, Blast_Score=344, Evalue=1e-94,
Organism=Drosophila melanogaster, GI24585660, Length=480, Percent_Identity=36.875, Blast_Score=317, Evalue=2e-86,
Organism=Drosophila melanogaster, GI20129399, Length=483, Percent_Identity=36.8530020703934, Blast_Score=308, Evalue=4e-84,
Organism=Drosophila melanogaster, GI24666674, Length=476, Percent_Identity=29.2016806722689, Blast_Score=189, Evalue=4e-48,
Organism=Drosophila melanogaster, GI24638878, Length=475, Percent_Identity=28.8421052631579, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24638876, Length=475, Percent_Identity=28.8421052631579, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI45552499, Length=339, Percent_Identity=28.023598820059, Blast_Score=132, Evalue=7e-31,
Organism=Drosophila melanogaster, GI281360303, Length=339, Percent_Identity=28.023598820059, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI281360299, Length=339, Percent_Identity=27.7286135693215, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI281360297, Length=339, Percent_Identity=27.7286135693215, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI281360295, Length=339, Percent_Identity=27.7286135693215, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24586250, Length=339, Percent_Identity=27.7286135693215, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI281360301, Length=339, Percent_Identity=27.7286135693215, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24668425, Length=438, Percent_Identity=24.4292237442922, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24668417, Length=438, Percent_Identity=24.4292237442922, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24668413, Length=438, Percent_Identity=24.4292237442922, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI28574525, Length=474, Percent_Identity=22.7848101265823, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28571802, Length=477, Percent_Identity=21.8029350104822, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571800, Length=477, Percent_Identity=21.8029350104822, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571806, Length=477, Percent_Identity=21.8029350104822, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571798, Length=477, Percent_Identity=21.8029350104822, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571796, Length=477, Percent_Identity=21.8029350104822, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571794, Length=477, Percent_Identity=21.8029350104822, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 51486; Mature: 51486

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNDPSLLHQQSFINGQWCDAVSGDTLKVVNPATNALIGHVPNMGQVETEMAIKAAEAA
CCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHH
LPAWRALTAKERGAKLRRWFELLNENSDDLALLMTTEQGKPLAEAKGEVTYAASFIEWFA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCCCCHHHHHHHHHHH
EEAKRIYGDTIPGHQGDKRLMVIKQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVK
HHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHCCHHHHHCCEEEEE
PAHQTPFTALAMAELAKRAGIPAGVFSVLTGDAVQIGNEMCSNPIVRKLSFTGSTNIGIK
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCHHHEEEECCCCCCCCCE
LMAQCAPTLKKLSLELGGNAPFIVFNDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQDG
EHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECEEEEECC
VYDEFALKLSTAVGKLKVGEGIKEGITTGPLINAAAVEKVQSHLIDAIAKGASVLAGGKV
CCHHHHHHHHHHHCCEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCEE
HDLGGNFFEPTVLTNVNKSMLVAREETFGPLAPLFKFSDVDDVIKQANDTEFGLAAYFYG
EECCCCCCCCHHEECCCHHHEEEEHHCCCCHHHHHHCCCHHHHHHCCCCCCCCEEEEEEC
RDISLVWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIEEYLEMKYICM
CCHHHHHHHHHHHHHCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
SV
CC
>Mature Secondary Structure
MQLNDPSLLHQQSFINGQWCDAVSGDTLKVVNPATNALIGHVPNMGQVETEMAIKAAEAA
CCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHH
LPAWRALTAKERGAKLRRWFELLNENSDDLALLMTTEQGKPLAEAKGEVTYAASFIEWFA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCCCCHHHHHHHHHHH
EEAKRIYGDTIPGHQGDKRLMVIKQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVK
HHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHCCHHHHHCCEEEEE
PAHQTPFTALAMAELAKRAGIPAGVFSVLTGDAVQIGNEMCSNPIVRKLSFTGSTNIGIK
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCHHHEEEECCCCCCCCCE
LMAQCAPTLKKLSLELGGNAPFIVFNDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQDG
EHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECEEEEECC
VYDEFALKLSTAVGKLKVGEGIKEGITTGPLINAAAVEKVQSHLIDAIAKGASVLAGGKV
CCHHHHHHHHHHHCCEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCEE
HDLGGNFFEPTVLTNVNKSMLVAREETFGPLAPLFKFSDVDDVIKQANDTEFGLAAYFYG
EECCCCCCCCHHEECCCHHHEEEEHHCCCCHHHHHHCCCHHHHHHCCCCCCCCEEEEEEC
RDISLVWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIEEYLEMKYICM
CCHHHHHHHHHHHHHCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
SV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]