Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160874062

Identifier: 160874062

GI number: 160874062

Start: 1114190

End: 1115017

Strand: Direct

Name: 160874062

Synonym: Sbal195_0942

Alternate gene names: NA

Gene position: 1114190-1115017 (Clockwise)

Preceding gene: 160874059

Following gene: 160874064

Centisome position: 20.84

GC content: 46.26

Gene sequence:

>828_bases
ATGGTAAGCAGATCCCCGTTCGAATCCTTTCAGTGGAAAAGCGATATTTTTAACTGTGAAAGCACTGATATTGATAATTT
TTATCTGCTGCTTGAGCAGGAAATGACCCGTTTGGGCATGGTTGAGAAGAATTTGGGTGAAGTTGGTAAATACAAGGTTA
GCTTGTATCAGTCTCCCGCCGCTAAGTCAGGCTTACCTTCTTTATTGATCAGCGCAGGATTTCATGGCGAAGAATCTGCA
GGCCCTTGGGGTTTGCTACATTTTTTGAGTGAAGCTTCAGCAGACCTATTTGAACGGGTGAACTTGAGTTTATTGCCCCT
CGTTAATCCAACCGGATTCAGCCGCGGCCATAGATTTAACAAATACGGCGAAAATCCAAATCGCGGTTTTGTATTTGAGA
ACGGTAAACCTAAAGCCAACGAACATACGTCGGTGGAAGGTAAGTTGTTGTTAGATCATGCGCAGTTACTGATTGCCGCT
TGCCGTGACGGTATTTTAACTTGCCACGAAGATGTCTTGAGCCGTGAAGCCTATGTGTATTCTTTTGAGCCAAGCCAAGT
GCCAGGACGCTTTAGCCTCGATTTGCGCGATACCTTAGGCGGTTATTTCCCGATTGCTGAGGATGGCGAGATTGATGCGT
GTCCTGTGAAGGATGGCTTGATCTTCAATCACTTCGATACGTCGTTTGAAGCGTGTTTAGTGCGAAGTGGTGCCCGTGTC
GGTGCTTGTACCGAAACACCAGCGCTGCAAAACTTCGATCAACGCGTATTGGCAAACAGTGCTGCTATGACTCACTTCTT
AGCCCTGTGTGCACCTTTATGTGATTGA

Upstream 100 bases:

>100_bases
AGCGACTGCTCGGATTTCATCGAAATCAGTTGAATAGCATTCAGTTTTTAAAAAGAACTGCTATGATGGCACAGTTCTTT
TTCTGGCATAAGTACAAGAT

Downstream 100 bases:

>100_bases
TCTTGTTATTCTATTAGGTGTTTAATCATCTAATAAATGACAAAAAAATACCCGCTAATAGCGGGTATTTTTTTAGGTGA
TATTTGCCAGTGAATTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MVSRSPFESFQWKSDIFNCESTDIDNFYLLLEQEMTRLGMVEKNLGEVGKYKVSLYQSPAAKSGLPSLLISAGFHGEESA
GPWGLLHFLSEASADLFERVNLSLLPLVNPTGFSRGHRFNKYGENPNRGFVFENGKPKANEHTSVEGKLLLDHAQLLIAA
CRDGILTCHEDVLSREAYVYSFEPSQVPGRFSLDLRDTLGGYFPIAEDGEIDACPVKDGLIFNHFDTSFEACLVRSGARV
GACTETPALQNFDQRVLANSAAMTHFLALCAPLCD

Sequences:

>Translated_275_residues
MVSRSPFESFQWKSDIFNCESTDIDNFYLLLEQEMTRLGMVEKNLGEVGKYKVSLYQSPAAKSGLPSLLISAGFHGEESA
GPWGLLHFLSEASADLFERVNLSLLPLVNPTGFSRGHRFNKYGENPNRGFVFENGKPKANEHTSVEGKLLLDHAQLLIAA
CRDGILTCHEDVLSREAYVYSFEPSQVPGRFSLDLRDTLGGYFPIAEDGEIDACPVKDGLIFNHFDTSFEACLVRSGARV
GACTETPALQNFDQRVLANSAAMTHFLALCAPLCD
>Mature_275_residues
MVSRSPFESFQWKSDIFNCESTDIDNFYLLLEQEMTRLGMVEKNLGEVGKYKVSLYQSPAAKSGLPSLLISAGFHGEESA
GPWGLLHFLSEASADLFERVNLSLLPLVNPTGFSRGHRFNKYGENPNRGFVFENGKPKANEHTSVEGKLLLDHAQLLIAA
CRDGILTCHEDVLSREAYVYSFEPSQVPGRFSLDLRDTLGGYFPIAEDGEIDACPVKDGLIFNHFDTSFEACLVRSGARV
GACTETPALQNFDQRVLANSAAMTHFLALCAPLCD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30339; Mature: 30339

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRSPFESFQWKSDIFNCESTDIDNFYLLLEQEMTRLGMVEKNLGEVGKYKVSLYQSPA
CCCCCCCHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
AKSGLPSLLISAGFHGEESAGPWGLLHFLSEASADLFERVNLSLLPLVNPTGFSRGHRFN
CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
KYGENPNRGFVFENGKPKANEHTSVEGKLLLDHAQLLIAACRDGILTCHEDVLSREAYVY
CCCCCCCCCEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEE
SFEPSQVPGRFSLDLRDTLGGYFPIAEDGEIDACPVKDGLIFNHFDTSFEACLVRSGARV
EECCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCC
GACTETPALQNFDQRVLANSAAMTHFLALCAPLCD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSRSPFESFQWKSDIFNCESTDIDNFYLLLEQEMTRLGMVEKNLGEVGKYKVSLYQSPA
CCCCCCCHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
AKSGLPSLLISAGFHGEESAGPWGLLHFLSEASADLFERVNLSLLPLVNPTGFSRGHRFN
CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
KYGENPNRGFVFENGKPKANEHTSVEGKLLLDHAQLLIAACRDGILTCHEDVLSREAYVY
CCCCCCCCCEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEE
SFEPSQVPGRFSLDLRDTLGGYFPIAEDGEIDACPVKDGLIFNHFDTSFEACLVRSGARV
EECCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCC
GACTETPALQNFDQRVLANSAAMTHFLALCAPLCD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA