| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874062
Identifier: 160874062
GI number: 160874062
Start: 1114190
End: 1115017
Strand: Direct
Name: 160874062
Synonym: Sbal195_0942
Alternate gene names: NA
Gene position: 1114190-1115017 (Clockwise)
Preceding gene: 160874059
Following gene: 160874064
Centisome position: 20.84
GC content: 46.26
Gene sequence:
>828_bases ATGGTAAGCAGATCCCCGTTCGAATCCTTTCAGTGGAAAAGCGATATTTTTAACTGTGAAAGCACTGATATTGATAATTT TTATCTGCTGCTTGAGCAGGAAATGACCCGTTTGGGCATGGTTGAGAAGAATTTGGGTGAAGTTGGTAAATACAAGGTTA GCTTGTATCAGTCTCCCGCCGCTAAGTCAGGCTTACCTTCTTTATTGATCAGCGCAGGATTTCATGGCGAAGAATCTGCA GGCCCTTGGGGTTTGCTACATTTTTTGAGTGAAGCTTCAGCAGACCTATTTGAACGGGTGAACTTGAGTTTATTGCCCCT CGTTAATCCAACCGGATTCAGCCGCGGCCATAGATTTAACAAATACGGCGAAAATCCAAATCGCGGTTTTGTATTTGAGA ACGGTAAACCTAAAGCCAACGAACATACGTCGGTGGAAGGTAAGTTGTTGTTAGATCATGCGCAGTTACTGATTGCCGCT TGCCGTGACGGTATTTTAACTTGCCACGAAGATGTCTTGAGCCGTGAAGCCTATGTGTATTCTTTTGAGCCAAGCCAAGT GCCAGGACGCTTTAGCCTCGATTTGCGCGATACCTTAGGCGGTTATTTCCCGATTGCTGAGGATGGCGAGATTGATGCGT GTCCTGTGAAGGATGGCTTGATCTTCAATCACTTCGATACGTCGTTTGAAGCGTGTTTAGTGCGAAGTGGTGCCCGTGTC GGTGCTTGTACCGAAACACCAGCGCTGCAAAACTTCGATCAACGCGTATTGGCAAACAGTGCTGCTATGACTCACTTCTT AGCCCTGTGTGCACCTTTATGTGATTGA
Upstream 100 bases:
>100_bases AGCGACTGCTCGGATTTCATCGAAATCAGTTGAATAGCATTCAGTTTTTAAAAAGAACTGCTATGATGGCACAGTTCTTT TTCTGGCATAAGTACAAGAT
Downstream 100 bases:
>100_bases TCTTGTTATTCTATTAGGTGTTTAATCATCTAATAAATGACAAAAAAATACCCGCTAATAGCGGGTATTTTTTTAGGTGA TATTTGCCAGTGAATTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MVSRSPFESFQWKSDIFNCESTDIDNFYLLLEQEMTRLGMVEKNLGEVGKYKVSLYQSPAAKSGLPSLLISAGFHGEESA GPWGLLHFLSEASADLFERVNLSLLPLVNPTGFSRGHRFNKYGENPNRGFVFENGKPKANEHTSVEGKLLLDHAQLLIAA CRDGILTCHEDVLSREAYVYSFEPSQVPGRFSLDLRDTLGGYFPIAEDGEIDACPVKDGLIFNHFDTSFEACLVRSGARV GACTETPALQNFDQRVLANSAAMTHFLALCAPLCD
Sequences:
>Translated_275_residues MVSRSPFESFQWKSDIFNCESTDIDNFYLLLEQEMTRLGMVEKNLGEVGKYKVSLYQSPAAKSGLPSLLISAGFHGEESA GPWGLLHFLSEASADLFERVNLSLLPLVNPTGFSRGHRFNKYGENPNRGFVFENGKPKANEHTSVEGKLLLDHAQLLIAA CRDGILTCHEDVLSREAYVYSFEPSQVPGRFSLDLRDTLGGYFPIAEDGEIDACPVKDGLIFNHFDTSFEACLVRSGARV GACTETPALQNFDQRVLANSAAMTHFLALCAPLCD >Mature_275_residues MVSRSPFESFQWKSDIFNCESTDIDNFYLLLEQEMTRLGMVEKNLGEVGKYKVSLYQSPAAKSGLPSLLISAGFHGEESA GPWGLLHFLSEASADLFERVNLSLLPLVNPTGFSRGHRFNKYGENPNRGFVFENGKPKANEHTSVEGKLLLDHAQLLIAA CRDGILTCHEDVLSREAYVYSFEPSQVPGRFSLDLRDTLGGYFPIAEDGEIDACPVKDGLIFNHFDTSFEACLVRSGARV GACTETPALQNFDQRVLANSAAMTHFLALCAPLCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30339; Mature: 30339
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRSPFESFQWKSDIFNCESTDIDNFYLLLEQEMTRLGMVEKNLGEVGKYKVSLYQSPA CCCCCCCHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC AKSGLPSLLISAGFHGEESAGPWGLLHFLSEASADLFERVNLSLLPLVNPTGFSRGHRFN CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC KYGENPNRGFVFENGKPKANEHTSVEGKLLLDHAQLLIAACRDGILTCHEDVLSREAYVY CCCCCCCCCEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEE SFEPSQVPGRFSLDLRDTLGGYFPIAEDGEIDACPVKDGLIFNHFDTSFEACLVRSGARV EECCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCC GACTETPALQNFDQRVLANSAAMTHFLALCAPLCD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVSRSPFESFQWKSDIFNCESTDIDNFYLLLEQEMTRLGMVEKNLGEVGKYKVSLYQSPA CCCCCCCHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC AKSGLPSLLISAGFHGEESAGPWGLLHFLSEASADLFERVNLSLLPLVNPTGFSRGHRFN CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC KYGENPNRGFVFENGKPKANEHTSVEGKLLLDHAQLLIAACRDGILTCHEDVLSREAYVY CCCCCCCCCEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEE SFEPSQVPGRFSLDLRDTLGGYFPIAEDGEIDACPVKDGLIFNHFDTSFEACLVRSGARV EECCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCC GACTETPALQNFDQRVLANSAAMTHFLALCAPLCD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA