| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873771
Identifier: 160873771
GI number: 160873771
Start: 781841
End: 784558
Strand: Reverse
Name: 160873771
Synonym: Sbal195_0649
Alternate gene names: NA
Gene position: 784558-781841 (Counterclockwise)
Preceding gene: 160873774
Following gene: 160873767
Centisome position: 14.67
GC content: 45.99
Gene sequence:
>2718_bases TTGCAAGGGATTCTCAACTACTACAAACAATGTTTTCAACACGATAGTGCCGAAATCAACCTCTGGTCTAGCCACAAGCT TGCTGAGCAAGAAAAGCTATTACTCCAACATGAAGACGAGTTAAGCAGTGGCTTCCTACCCCGTTTACCCGTGCCATTTG CCCAAGCCTCTGCATTAATGGCGCGTAGTACCTTGTATCTACGTGAAAAAGTACTATTGCACTGTTGTTTATTTTTCTGC GGCACAGTCGAACTTAATGGCGAAAAACGTAAAGTCGTGACACCACTCCTTTACCGCGAATGCCAATTACAGGCAGATGG CGATAACATTTACCTGCAGGGCAATGACACATTTTCTGGTCAAGGGCCATTCACCATCAATGAAGCCCTGTTAGAAAAAT TAGTCATTGAAGGACACAGCTTAAGTCAAGAGTTACGCGATAATCCAACAGATGTCAGTGGCTGGATAGCTTGGCTGCGG GCGGGCCAAGCCGATGTTGATACCAGTCATTTATTTCATTTTCCCAAACTGATCGATGAAGCTGAATTCACTAGCTTATG CCGTAAACGTGGGCAGTTTATGGTCAGTCGGAGCCAAATTATTCTTGCAGAGCGTTCGCTCGCTAGTCGGGGCATTTTGC ACGAACTCGACAAGCTAATAACAGCGCCCTCACACTCTGCGCCGCTTAAAGCGCTATTCGCAGAAACCCAACAAAAAATA TCAGCAAGCGACAATGCAGACACGCAAGAGGCTTATCTTCCAGGGCTGTTAAGCCGCGCCCAAATTCAGGCGTTAAAGAT AGCGGCCAATCAAACTTTGGGGCAGATCTCAGGCCCACCCGGAACAGGTAAAAGTTACACCATAGCCACAGTGGCGGCGG AGCAGGTATTAAGGGGGAAATCTGTCCTCATCGTCGCCCACACAGATGTTGCTGTTGATGTGATTGCCGATAAGTTAGAG CAACAATTCCAGCTAGGTAGCAGTCTTATCCGAGCCGGCTCGCCGCAGTTTATTAAAGTCCTTAAAAACCAGATAGATGA AATGCTCCATGGTCAGCACCCAGCGACTGATGAAACCATTTCAGATATCCTACTACTCAATGCAAAACAGCAACTTAATA CTGTGGCCCGTCAGCAAGCCAAAATGGAAGCCAGTTTTATACACCATTGCCGCCATGCCATACGTCGCGGCCAAAAACTG GCGACCTTACAACAAGGACAATCGCGCTGGCGCTTAGGATTTTATAATTGGGCATACCATGCGGGGATCAAACAATTTGC CCAGCAATGGAATGTGCTTGATAAATTAACGACACTGATAGCGCAAAAAGAAAGCTTAAGTCTCAAATACTTACAATTGG CCACTCACTATCGATTAAACCAATTACTCAAACATAAGCGCAGTACGCTGGTGAGTTTTGCCAGTGCACTTCGCGCTCGG CAGTCCGCTAAGCAAGTCGAAGGTTTCTACAAAACGGATTTTGATGCCCTAAAACAAACCTTTCCTATTTGGTTATCTAG CCTTGCCAGCTTACATAAAGTGCTCCCTATGGAGCAGCAAATGTTTGATTTAGTGATTATTGATGAAGCCACTCAAGCCA ATATTGCCGAATGCTTACCTGCATTGCAGCGGGCAAAGGCGGCACTGGTTGTTGGTGATAACAAACAATTACGACATTTC TCGTTTTTATCCCGCGCGAAGCAAACCCAAATCCACACTCAGTTAGGACTCGCGCAGGATTGTCGCGGGTTAATGAGCTA CCGTGATGCGAGCATGCTCGACTTAGTATCACAATCCCTCACGAGCCAGTTCCAAGTGGTATTTTTAAATGAGCATTTCC GTAGCAAACCTGAGCTGATCCAATTTAGTAATCAGCAGTTTTATCAAGGAATGCTGAAAATTATGCAGCACAGACCCTGC ACGAGTTCAGGACACTTACATAGAATACAAGTGACAGGCGCGCGGGATAGCAAGGGAGTTAACAGACTAGAAGCGGAGGC ATTAATTCAAAAGTTATCACAACTGATTGATGAACAAATGAATACATTAGTGCCTTCCAGCATTGGTGTGCTCTCCTGTT TTCGCAATCAAACTGAGTATTTATCCCAGCAAATCATGGCGCGCTTTAGCGCACAACAAATAGAACGTCATCAATTGAGG ATTGCCACGCCCTTTGGTTTTCAAGGGGAAGAGCGCGATATCATGCTGATATCTTTTAGCATTACGGCCAACGACAGCCG AGCTGCGGTGTATTTAAATCGAGCCGATATGTTCAACGTCGCGATTACCCGAGCCAAACAGGCGCAATGGCTATTTTTAT CGGTACAAGAGCATGAACTCCCCAACAATAATTTACTGGCAACTTACTTAGCATCGGCGGGCCAATTTCAAGCGGCACAC AATTATGTCGATGCACTCGATACCTTTGGCCAGTCGGTGGCACAGGCGATTGAAGAAAAAGGGATAACAGTCTGGCGCGC CTACCATATGGCGGGGCTGGAACTGGATATTTTATGTCGCTATGGTGAGCAATATTTAGCGATAGATTTAATCGGTTACC CAGGACCTTGGGCGGACTTTTTCGATATTGAACTGTATAAACTCTTACAGCGCGCAGGCATTAAACTTATCCCCGTGAGC TATGGGCTTTGGTGTCAGCAGCGGGAACTGTGTATCCAACAAATCTGCAATCAATTTAAGCTAGAACAATCGAATTAA
Upstream 100 bases:
>100_bases CGACTATGGATAAACCATCCACAGACGGTACAAACCTTGTTCGACTTATGCGATTGGGTTACTCTCGCATCGCCAATTAA GCCTTTGGGATGGATAGGAT
Downstream 100 bases:
>100_bases ACAATAAGCATCTCACGGATGACATCCCCGTTGACGACCGATGAAATAGGCCAAGACGGAACGTTGGAGGTAGAACAAAA TATCCCCTGCACTGGCTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 905; Mature: 905
Protein sequence:
>905_residues MQGILNYYKQCFQHDSAEINLWSSHKLAEQEKLLLQHEDELSSGFLPRLPVPFAQASALMARSTLYLREKVLLHCCLFFC GTVELNGEKRKVVTPLLYRECQLQADGDNIYLQGNDTFSGQGPFTINEALLEKLVIEGHSLSQELRDNPTDVSGWIAWLR AGQADVDTSHLFHFPKLIDEAEFTSLCRKRGQFMVSRSQIILAERSLASRGILHELDKLITAPSHSAPLKALFAETQQKI SASDNADTQEAYLPGLLSRAQIQALKIAANQTLGQISGPPGTGKSYTIATVAAEQVLRGKSVLIVAHTDVAVDVIADKLE QQFQLGSSLIRAGSPQFIKVLKNQIDEMLHGQHPATDETISDILLLNAKQQLNTVARQQAKMEASFIHHCRHAIRRGQKL ATLQQGQSRWRLGFYNWAYHAGIKQFAQQWNVLDKLTTLIAQKESLSLKYLQLATHYRLNQLLKHKRSTLVSFASALRAR QSAKQVEGFYKTDFDALKQTFPIWLSSLASLHKVLPMEQQMFDLVIIDEATQANIAECLPALQRAKAALVVGDNKQLRHF SFLSRAKQTQIHTQLGLAQDCRGLMSYRDASMLDLVSQSLTSQFQVVFLNEHFRSKPELIQFSNQQFYQGMLKIMQHRPC TSSGHLHRIQVTGARDSKGVNRLEAEALIQKLSQLIDEQMNTLVPSSIGVLSCFRNQTEYLSQQIMARFSAQQIERHQLR IATPFGFQGEERDIMLISFSITANDSRAAVYLNRADMFNVAITRAKQAQWLFLSVQEHELPNNNLLATYLASAGQFQAAH NYVDALDTFGQSVAQAIEEKGITVWRAYHMAGLELDILCRYGEQYLAIDLIGYPGPWADFFDIELYKLLQRAGIKLIPVS YGLWCQQRELCIQQICNQFKLEQSN
Sequences:
>Translated_905_residues MQGILNYYKQCFQHDSAEINLWSSHKLAEQEKLLLQHEDELSSGFLPRLPVPFAQASALMARSTLYLREKVLLHCCLFFC GTVELNGEKRKVVTPLLYRECQLQADGDNIYLQGNDTFSGQGPFTINEALLEKLVIEGHSLSQELRDNPTDVSGWIAWLR AGQADVDTSHLFHFPKLIDEAEFTSLCRKRGQFMVSRSQIILAERSLASRGILHELDKLITAPSHSAPLKALFAETQQKI SASDNADTQEAYLPGLLSRAQIQALKIAANQTLGQISGPPGTGKSYTIATVAAEQVLRGKSVLIVAHTDVAVDVIADKLE QQFQLGSSLIRAGSPQFIKVLKNQIDEMLHGQHPATDETISDILLLNAKQQLNTVARQQAKMEASFIHHCRHAIRRGQKL ATLQQGQSRWRLGFYNWAYHAGIKQFAQQWNVLDKLTTLIAQKESLSLKYLQLATHYRLNQLLKHKRSTLVSFASALRAR QSAKQVEGFYKTDFDALKQTFPIWLSSLASLHKVLPMEQQMFDLVIIDEATQANIAECLPALQRAKAALVVGDNKQLRHF SFLSRAKQTQIHTQLGLAQDCRGLMSYRDASMLDLVSQSLTSQFQVVFLNEHFRSKPELIQFSNQQFYQGMLKIMQHRPC TSSGHLHRIQVTGARDSKGVNRLEAEALIQKLSQLIDEQMNTLVPSSIGVLSCFRNQTEYLSQQIMARFSAQQIERHQLR IATPFGFQGEERDIMLISFSITANDSRAAVYLNRADMFNVAITRAKQAQWLFLSVQEHELPNNNLLATYLASAGQFQAAH NYVDALDTFGQSVAQAIEEKGITVWRAYHMAGLELDILCRYGEQYLAIDLIGYPGPWADFFDIELYKLLQRAGIKLIPVS YGLWCQQRELCIQQICNQFKLEQSN >Mature_905_residues MQGILNYYKQCFQHDSAEINLWSSHKLAEQEKLLLQHEDELSSGFLPRLPVPFAQASALMARSTLYLREKVLLHCCLFFC GTVELNGEKRKVVTPLLYRECQLQADGDNIYLQGNDTFSGQGPFTINEALLEKLVIEGHSLSQELRDNPTDVSGWIAWLR AGQADVDTSHLFHFPKLIDEAEFTSLCRKRGQFMVSRSQIILAERSLASRGILHELDKLITAPSHSAPLKALFAETQQKI SASDNADTQEAYLPGLLSRAQIQALKIAANQTLGQISGPPGTGKSYTIATVAAEQVLRGKSVLIVAHTDVAVDVIADKLE QQFQLGSSLIRAGSPQFIKVLKNQIDEMLHGQHPATDETISDILLLNAKQQLNTVARQQAKMEASFIHHCRHAIRRGQKL ATLQQGQSRWRLGFYNWAYHAGIKQFAQQWNVLDKLTTLIAQKESLSLKYLQLATHYRLNQLLKHKRSTLVSFASALRAR QSAKQVEGFYKTDFDALKQTFPIWLSSLASLHKVLPMEQQMFDLVIIDEATQANIAECLPALQRAKAALVVGDNKQLRHF SFLSRAKQTQIHTQLGLAQDCRGLMSYRDASMLDLVSQSLTSQFQVVFLNEHFRSKPELIQFSNQQFYQGMLKIMQHRPC TSSGHLHRIQVTGARDSKGVNRLEAEALIQKLSQLIDEQMNTLVPSSIGVLSCFRNQTEYLSQQIMARFSAQQIERHQLR IATPFGFQGEERDIMLISFSITANDSRAAVYLNRADMFNVAITRAKQAQWLFLSVQEHELPNNNLLATYLASAGQFQAAH NYVDALDTFGQSVAQAIEEKGITVWRAYHMAGLELDILCRYGEQYLAIDLIGYPGPWADFFDIELYKLLQRAGIKLIPVS YGLWCQQRELCIQQICNQFKLEQSN
Specific function: Unknown
COG id: COG1112
COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA2/NAM7 helicase family [H]
Homologues:
Organism=Drosophila melanogaster, GI18859757, Length=265, Percent_Identity=24.9056603773585, Blast_Score=69, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102149; Mature: 102149
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGILNYYKQCFQHDSAEINLWSSHKLAEQEKLLLQHEDELSSGFLPRLPVPFAQASALM CCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHH ARSTLYLREKVLLHCCLFFCGTVELNGEKRKVVTPLLYRECQLQADGDNIYLQGNDTFSG HHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHEEEECCCEEEEECCCCCCC QGPFTINEALLEKLVIEGHSLSQELRDNPTDVSGWIAWLRAGQADVDTSHLFHFPKLIDE CCCEEHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AEFTSLCRKRGQFMVSRSQIILAERSLASRGILHELDKLITAPSHSAPLKALFAETQQKI HHHHHHHHHCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SASDNADTQEAYLPGLLSRAQIQALKIAANQTLGQISGPPGTGKSYTIATVAAEQVLRGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEEHHHHHHHHHCCC SVLIVAHTDVAVDVIADKLEQQFQLGSSLIRAGSPQFIKVLKNQIDEMLHGQHPATDETI CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHH SDILLLNAKQQLNTVARQQAKMEASFIHHCRHAIRRGQKLATLQQGQSRWRLGFYNWAYH HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECHHHHHH AGIKQFAQQWNVLDKLTTLIAQKESLSLKYLQLATHYRLNQLLKHKRSTLVSFASALRAR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSAKQVEGFYKTDFDALKQTFPIWLSSLASLHKVLPMEQQMFDLVIIDEATQANIAECLP HHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCCCCHHHHHH ALQRAKAALVVGDNKQLRHFSFLSRAKQTQIHTQLGLAQDCRGLMSYRDASMLDLVSQSL HHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHH TSQFQVVFLNEHFRSKPELIQFSNQQFYQGMLKIMQHRPCTSSGHLHRIQVTGARDSKGV HHCEEEEEEEHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCC NRLEAEALIQKLSQLIDEQMNTLVPSSIGVLSCFRNQTEYLSQQIMARFSAQQIERHQLR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IATPFGFQGEERDIMLISFSITANDSRAAVYLNRADMFNVAITRAKQAQWLFLSVQEHEL EECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCC PNNNLLATYLASAGQFQAAHNYVDALDTFGQSVAQAIEEKGITVWRAYHMAGLELDILCR CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCHHHHHH YGEQYLAIDLIGYPGPWADFFDIELYKLLQRAGIKLIPVSYGLWCQQRELCIQQICNQFK CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHC LEQSN CCCCC >Mature Secondary Structure MQGILNYYKQCFQHDSAEINLWSSHKLAEQEKLLLQHEDELSSGFLPRLPVPFAQASALM CCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHH ARSTLYLREKVLLHCCLFFCGTVELNGEKRKVVTPLLYRECQLQADGDNIYLQGNDTFSG HHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHEEEECCCEEEEECCCCCCC QGPFTINEALLEKLVIEGHSLSQELRDNPTDVSGWIAWLRAGQADVDTSHLFHFPKLIDE CCCEEHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AEFTSLCRKRGQFMVSRSQIILAERSLASRGILHELDKLITAPSHSAPLKALFAETQQKI HHHHHHHHHCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SASDNADTQEAYLPGLLSRAQIQALKIAANQTLGQISGPPGTGKSYTIATVAAEQVLRGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEEHHHHHHHHHCCC SVLIVAHTDVAVDVIADKLEQQFQLGSSLIRAGSPQFIKVLKNQIDEMLHGQHPATDETI CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHH SDILLLNAKQQLNTVARQQAKMEASFIHHCRHAIRRGQKLATLQQGQSRWRLGFYNWAYH HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECHHHHHH AGIKQFAQQWNVLDKLTTLIAQKESLSLKYLQLATHYRLNQLLKHKRSTLVSFASALRAR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSAKQVEGFYKTDFDALKQTFPIWLSSLASLHKVLPMEQQMFDLVIIDEATQANIAECLP HHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCCCCHHHHHH ALQRAKAALVVGDNKQLRHFSFLSRAKQTQIHTQLGLAQDCRGLMSYRDASMLDLVSQSL HHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHH TSQFQVVFLNEHFRSKPELIQFSNQQFYQGMLKIMQHRPCTSSGHLHRIQVTGARDSKGV HHCEEEEEEEHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCC NRLEAEALIQKLSQLIDEQMNTLVPSSIGVLSCFRNQTEYLSQQIMARFSAQQIERHQLR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IATPFGFQGEERDIMLISFSITANDSRAAVYLNRADMFNVAITRAKQAQWLFLSVQEHEL EECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCC PNNNLLATYLASAGQFQAAHNYVDALDTFGQSVAQAIEEKGITVWRAYHMAGLELDILCR CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCHHHHHH YGEQYLAIDLIGYPGPWADFFDIELYKLLQRAGIKLIPVSYGLWCQQRELCIQQICNQFK CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHC LEQSN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7569993; 1945886; 8253680 [H]