Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is ybcL [C]

Identifier: 160873756

GI number: 160873756

Start: 758802

End: 759608

Strand: Direct

Name: ybcL [C]

Synonym: Sbal195_0634

Alternate gene names: 160873756

Gene position: 758802-759608 (Clockwise)

Preceding gene: 160873755

Following gene: 160873757

Centisome position: 14.19

GC content: 46.1

Gene sequence:

>807_bases
ATGAAAACCCACATTATTGGCTCCATTTTATCTTTGACGCTGCTAGCCGCAACGGCCGTTTATGCCAAGCCGTCGCTTGA
ACTCACCAGCCCTGCATTTACAGATAATGGTACATTGCCAACTGAATTTACCTGTGAGGGAGAGGGGATCTCACCGCCAT
TAAGCTGGCAAGGAGTACCCGACGGAACCCAATCATTGGTGATGATAATGGATCACATGCCTGATCATCACCCAACCAAC
AATGAACAGGGCACACCAAAGCCTTACTTGAATGATAATAAAAACGACACCCCACCTCAAGTTGACTCTCTGGCTCCTAA
ACCAAACCAGCCTGAAGAACTCAAGTGGTATTGGACTGTCTATAATATTCCTGCGCAAGCTTCTGGCATTGATTCAGGTA
GTAAAGCAAATCAATCTGTAGGCTCGTTTGGCAGCAATACAGTGAATGACCGTAATGAGTATGCACCGCCCTGTTCCAAA
GGGCCCGGCCCCAAAATTTACACCTTTCATCTTTATGCACTATCCAAATCTTTAGAAATAGATCCGTCAGCCCCAGTTTC
AGCCCCTGTGTCTGCAATAATGCTTCGACAAAGCATGCAAGACTTTGTACTAGACTCGGACTCTTTGACGGTGAGTTTTG
AACGACACTGTCAAACGCCGCAACGGGCTCATTCACCACAAGCTCATCCGCAAGAATTTCATCCGGAACAAGCACAGCCA
CATAATGACAACATGGATCCGCTGTCAACATTGCCATTGTGTAAATCAACGTTGAATACGACTTCTGCTGTTATTGATCG
CAAGTAA

Upstream 100 bases:

>100_bases
CCATCGTTAAATGACAACATTGTCATCCATCAGCGAAGCCTAATCGATACAATTAAGTTAACTCATTAATCGTTAACTTA
ATTGCTATGGAGGTTAGGCC

Downstream 100 bases:

>100_bases
ATGCAAAACCGTTATTACTAGATAATTGGCGCAAATTCAGTCACCGAAAAGACATCAAGAGATCCGTATGAAAAAGAACA
TTAAAAACACCTTGCTGCTT

Product: PEBP family protein

Products: NA

Alternate protein names: YbhB And YbcL

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKTHIIGSILSLTLLAATAVYAKPSLELTSPAFTDNGTLPTEFTCEGEGISPPLSWQGVPDGTQSLVMIMDHMPDHHPTN
NEQGTPKPYLNDNKNDTPPQVDSLAPKPNQPEELKWYWTVYNIPAQASGIDSGSKANQSVGSFGSNTVNDRNEYAPPCSK
GPGPKIYTFHLYALSKSLEIDPSAPVSAPVSAIMLRQSMQDFVLDSDSLTVSFERHCQTPQRAHSPQAHPQEFHPEQAQP
HNDNMDPLSTLPLCKSTLNTTSAVIDRK

Sequences:

>Translated_268_residues
MKTHIIGSILSLTLLAATAVYAKPSLELTSPAFTDNGTLPTEFTCEGEGISPPLSWQGVPDGTQSLVMIMDHMPDHHPTN
NEQGTPKPYLNDNKNDTPPQVDSLAPKPNQPEELKWYWTVYNIPAQASGIDSGSKANQSVGSFGSNTVNDRNEYAPPCSK
GPGPKIYTFHLYALSKSLEIDPSAPVSAPVSAIMLRQSMQDFVLDSDSLTVSFERHCQTPQRAHSPQAHPQEFHPEQAQP
HNDNMDPLSTLPLCKSTLNTTSAVIDRK
>Mature_268_residues
MKTHIIGSILSLTLLAATAVYAKPSLELTSPAFTDNGTLPTEFTCEGEGISPPLSWQGVPDGTQSLVMIMDHMPDHHPTN
NEQGTPKPYLNDNKNDTPPQVDSLAPKPNQPEELKWYWTVYNIPAQASGIDSGSKANQSVGSFGSNTVNDRNEYAPPCSK
GPGPKIYTFHLYALSKSLEIDPSAPVSAPVSAIMLRQSMQDFVLDSDSLTVSFERHCQTPQRAHSPQAHPQEFHPEQAQP
HNDNMDPLSTLPLCKSTLNTTSAVIDRK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29215; Mature: 29215

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTHIIGSILSLTLLAATAVYAKPSLELTSPAFTDNGTLPTEFTCEGEGISPPLSWQGVP
CCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
DGTQSLVMIMDHMPDHHPTNNEQGTPKPYLNDNKNDTPPQVDSLAPKPNQPEELKWYWTV
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEE
YNIPAQASGIDSGSKANQSVGSFGSNTVNDRNEYAPPCSKGPGPKIYTFHLYALSKSLEI
EECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC
DPSAPVSAPVSAIMLRQSMQDFVLDSDSLTVSFERHCQTPQRAHSPQAHPQEFHPEQAQP
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHCCCCCCCHHCCCCCCCC
HNDNMDPLSTLPLCKSTLNTTSAVIDRK
CCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTHIIGSILSLTLLAATAVYAKPSLELTSPAFTDNGTLPTEFTCEGEGISPPLSWQGVP
CCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
DGTQSLVMIMDHMPDHHPTNNEQGTPKPYLNDNKNDTPPQVDSLAPKPNQPEELKWYWTV
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEE
YNIPAQASGIDSGSKANQSVGSFGSNTVNDRNEYAPPCSKGPGPKIYTFHLYALSKSLEI
EECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC
DPSAPVSAPVSAIMLRQSMQDFVLDSDSLTVSFERHCQTPQRAHSPQAHPQEFHPEQAQP
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHCCCCCCCHHCCCCCCCC
HNDNMDPLSTLPLCKSTLNTTSAVIDRK
CCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA