| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873747
Identifier: 160873747
GI number: 160873747
Start: 750222
End: 750563
Strand: Direct
Name: 160873747
Synonym: Sbal195_0625
Alternate gene names: NA
Gene position: 750222-750563 (Clockwise)
Preceding gene: 160873746
Following gene: 160873748
Centisome position: 14.03
GC content: 47.95
Gene sequence:
>342_bases ATGTGGGCTTATTATACAAAGGGTTGTTATCAATTACTGCGACGTAAAGGCTGCAAAGCTACCATCCCACCGCGCTCAAA TGCGGGGTTATGGGAAAAGGGGCATCCACGCAATGAAGCTGTAGAAACACTGAAATCGGGTCAGCTGAAACAATGGAAAA TCGATAACGGCTATCACCAGCGCTCTCTAGCAGAGACCGCCATGGGCCGATATAAACAGTTGAATAGTCCAATGATAAGT TTGCGTGATTACAATGCACAAGTCGCAGAGGCGTTGGCTGGTGTGAAGGCGATGAACAACGTCATTAGACTGGGCATGCC AGTTCGCCAGCAAGTTGCTTAA
Upstream 100 bases:
>100_bases ATTAAGTCGTTTTCGTTGAAGTAAGTCATGTATCAGTAGGTCATAATGAAGTGTCACCCCTCACTCAATACTCTATGGCA AAGATAACGTATGTTTTAGC
Downstream 100 bases:
>100_bases TCGGCCAGAAACCTTGGAATTGATTATCTTCTATGAAATGATTTAAGCAATAACGCCTCTGTCAGTTCTACTGTGTGTGG CAGTTAAATCTATATGTTCA
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MWAYYTKGCYQLLRRKGCKATIPPRSNAGLWEKGHPRNEAVETLKSGQLKQWKIDNGYHQRSLAETAMGRYKQLNSPMIS LRDYNAQVAEALAGVKAMNNVIRLGMPVRQQVA
Sequences:
>Translated_113_residues MWAYYTKGCYQLLRRKGCKATIPPRSNAGLWEKGHPRNEAVETLKSGQLKQWKIDNGYHQRSLAETAMGRYKQLNSPMIS LRDYNAQVAEALAGVKAMNNVIRLGMPVRQQVA >Mature_113_residues MWAYYTKGCYQLLRRKGCKATIPPRSNAGLWEKGHPRNEAVETLKSGQLKQWKIDNGYHQRSLAETAMGRYKQLNSPMIS LRDYNAQVAEALAGVKAMNNVIRLGMPVRQQVA
Specific function: Required for transposition of transposon Tn903 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 12822; Mature: 12822
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWAYYTKGCYQLLRRKGCKATIPPRSNAGLWEKGHPRNEAVETLKSGQLKQWKIDNGYHQ CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHH RSLAETAMGRYKQLNSPMISLRDYNAQVAEALAGVKAMNNVIRLGMPVRQQVA HHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure MWAYYTKGCYQLLRRKGCKATIPPRSNAGLWEKGHPRNEAVETLKSGQLKQWKIDNGYHQ CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHH RSLAETAMGRYKQLNSPMISLRDYNAQVAEALAGVKAMNNVIRLGMPVRQQVA HHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6270337; 6261245; 6271455 [H]