| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873746
Identifier: 160873746
GI number: 160873746
Start: 749838
End: 750110
Strand: Direct
Name: 160873746
Synonym: Sbal195_0624
Alternate gene names: NA
Gene position: 749838-750110 (Clockwise)
Preceding gene: 160873745
Following gene: 160873747
Centisome position: 14.02
GC content: 38.83
Gene sequence:
>273_bases ATGGCGTCTGTTATTTTATCATTTTTTACGTTCTATAGCTTTCTCAAAGTATTGTTTATTTTGTATACTTTAATAATAAC GCCACCTGATTACACCTCTATCAGTAAACTCGCTAAGATCATTAATGTTCAGAACAACAACTCAAGTCGCGGACCGATAA TGCATGTTGTCGATACCACAAGCCTGAAAGTGTTTGGTGAAGGCGAATGGAAAACGCGCAAGTATTGCAGCGAAAAACGC TGCACCATGGTGCAAGTTGCACTTAGCTATTGA
Upstream 100 bases:
>100_bases CTTTCGGTGTGGGTCTAACTTCAGTGTAAGCGTTCTCCTACCTGAACATTATAGTGTGGTTGGGGGGAAGCTATAGCGAT CTAAACTTCGCTGATGATAA
Downstream 100 bases:
>100_bases TGCTAATACACATTAAGTCGTTTTCGTTGAAGTAAGTCATGTATCAGTAGGTCATAATGAAGTGTCACCCCTCACTCAAT ACTCTATGGCAAAGATAACG
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MASVILSFFTFYSFLKVLFILYTLIITPPDYTSISKLAKIINVQNNNSSRGPIMHVVDTTSLKVFGEGEWKTRKYCSEKR CTMVQVALSY
Sequences:
>Translated_90_residues MASVILSFFTFYSFLKVLFILYTLIITPPDYTSISKLAKIINVQNNNSSRGPIMHVVDTTSLKVFGEGEWKTRKYCSEKR CTMVQVALSY >Mature_89_residues ASVILSFFTFYSFLKVLFILYTLIITPPDYTSISKLAKIINVQNNNSSRGPIMHVVDTTSLKVFGEGEWKTRKYCSEKRC TMVQVALSY
Specific function: Required for transposition of transposon Tn903 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 10295; Mature: 10164
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVILSFFTFYSFLKVLFILYTLIITPPDYTSISKLAKIINVQNNNSSRGPIMHVVDTT CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECC SLKVFGEGEWKTRKYCSEKRCTMVQVALSY EEEEEECCCCHHHHHHHCCCCEEEEEEECC >Mature Secondary Structure ASVILSFFTFYSFLKVLFILYTLIITPPDYTSISKLAKIINVQNNNSSRGPIMHVVDTT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECC SLKVFGEGEWKTRKYCSEKRCTMVQVALSY EEEEEECCCCHHHHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6270337; 6261245; 6271455 [H]