| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is metL [H]
Identifier: 160873683
GI number: 160873683
Start: 648790
End: 651183
Strand: Direct
Name: metL [H]
Synonym: Sbal195_0561
Alternate gene names: 160873683
Gene position: 648790-651183 (Clockwise)
Preceding gene: 160873682
Following gene: 160873684
Centisome position: 12.13
GC content: 51.04
Gene sequence:
>2394_bases ATGGCACGTTGTCACTTACATAAATTTGGTGGCTCCAGTTTAGCGGATGCCGATTGTTATCGTCGAGTCGCCCATATCCT GTTAACCCACGGTCATAGCGATGACCTTGTGGTGGTCTCTGCGGCGGGTAAGAGCACGAATTTCCTGTATAAATTATTAG CGCTGCGTGATGCGGGTCAGTTGTGGCAAGAAGAATTACAAGTGCTGACCAGCTATCAACAGGGGTTGGTAGAGCAGTTA TTGTCGAACGAACAAGCCCGCGATCTGCGCGAGCGTTTGGCGACAGATCAGGCGCAACTCATCAGTTTATTGTCCCTCGA CGAACGTAACGAATACCAAGTTAACCATGTGGTGAGCTTTGGTGAACGTTGGTCGGCACGCCTGATGGCGGCGCTGCTGC GCGAATCTGGCGTGGCGGCAAGCCATGTGGATGCCTGTTCAATTTTAGTGGCCGATGAAGCCGCCGTGCCGCAAATTCGG GTGCAAGAATCCCGCGCTAAAGTACAAGCGCTATTGGCCGCCCACCCAAATGAACGCTTAGTGATCACAGGCTTTATCTG CGCTAACGAGCGCGGCGATACTTTATTACTTGGTCGTAATGGTTCCGATTTTAGCGCTAGCTTGATTGCCAGCCTTGCCG ATATTGAGCGCGTGACCATTTGGACCGATGTGGAAGGGGTGTTCAACGCTGATCCTAATAAGATCAACGATGCCAAATTA CTAAAAAGCATGTCACTTGCCGAAGCTGACCGCTTAGCGCGTTTAGGCTCGCCGGTATTGCATTCGCGCACTTTGCAGCC TCTGTTTAATACCGAAGTGAGTTTAGCGGTGCGCTCAAGTTATGCATCGCACACTGACTTTACCTTGATTGCTCCCCACA GTTCGTCGGCGAGCGCGCCTGTGGTGACGAACCTCAATGCAATCGTGCTGTTCGGCTTTAAGCTCACGGGCGAATTAACA AGCCTATTAGATTCGTTGATCGCCGCGGGTTTAACGCCATTGGCCCATTGGACCTCTGCCCATCAAAGGGTTGAGCTTGC CTATACCGCTGAAAATCAAAAACAAGTACAAAGATTGCTCGATGCCGAGGCACAAGCATTAGGGATCAGCGAACAACAGA TCAACACAGATCTCGGCCTAGTGGCGTTAGTGAGTGCCGATGCCGAACATTATCGCCGTAGCTTCGCCCGTTTATTAAGT CGTGATGCTAAACCTTTGTTTAGTGGTGACTTAAGCTTAGTGACGCTGGTGCCTCAGTCGCAGGTGAATCTGTTAACCCA AAAGGTCCACCGTCGCTGCGCTGGGCCACGTAAACGCATTGGTGTCTTGCTGCTCGGTGTGGGTAATATCGGTGAGGCTT GGGTCGATTTGTTTAAGTCGGTTTCACCATCATTGGACCATGAACTCGAAGCCAGTGTTGAGTTAGTCGGTTTGGTCAGT TCGAGTAAAGCTTTGATTAAATCCACAGGGATTAATCTTGCCGCGTGGCAGACTGAGTTTAATACCGAGGCAACACCTTG GCAGTACGAGCACTTGTTCGAGCAATTAGAACGGGTTAACTGCGATGAGCTGGTGGCCTTAGATATCAGTGCCAGTGCCA GTTTGACACTGCAATATCCAGAGCTATTCGAGCGTGGCATCCATGTGGTGAGCGCGAATAAACTCGCAGGCTCGGGCCCA CTGCCTTTCTACCGTGAGTTAAAACAGCAACTGGGTAATCGTCGTTTATTTTGGCGCTATAACGCCAGCTGTGGCGCGGG TTTGCCTATCCAACATGCGTTAAATGATCTGCGTAACAGCGGTGATAGCGTTGAAGCCGTGGGCGGGATTTTCTCTGGCA CCTTGTGTTGGTTGTTTGAGAAATACGATACCAGCAAGCCTTTCTCTGAATTAGTGATTGAAGCCAGAGGCTTAGGCATC ACTGAACCCGATCCCCGCGACGATCTGTCCGGTCGTGATATGCAGCGTAAATTGCTCATTTTGGCCCGTGAAATTGGCCT TGAAATCGAGCTTGAAGATATTGAATTACGCTCATTAGTGCCAGCCGATTTGGCGGATATTCCCTTAGATCAGTTTCTCG CCCGCATTGCCGAGTTAGATGCCGATCTGCTGCAACAATACGGTGCGGCGGCGGAGCAAAATAAGGTGCTCAGATACGTG GCATCCTTAGATAACAGCGGCTCAGAGCTTAAAGCTGAAGTCGGTTTGCAGTGGATTGATGCCCATCATCCCTACGCTAA TTTGACCCCAGGCGATAACGTGTTTGTGATCCGCAGCGTCTTCTATCAAGGCAATCCGTTGATCATCCGTGGACCGGGCG CTGGACGTGAAGTGACAGCGGCAGCGGTGCAGTCGGATCTGACGCAGATCTGTCGCGATCTCTTGCAAGAGTAG
Upstream 100 bases:
>100_bases TATTGCGTCTATCGGTGGGTATTGAAGATGCCGCCGATTTAGTTGCAGATATTCAAGCAGGATTAGCCGCCGTTGCGGCT TGTCAGTAGAGGAATAATAG
Downstream 100 bases:
>100_bases ACTGAAATTCAGCAGCTTAAAGGACTCATTCGAGTCCTTTTTTATTGGCTAGAATAAATCTATCGAATTAACCGAGATTA AATGCGGTTTATGGACATTT
Product: bifunctional aspartate kinase II/homoserine dehydrogenase II
Products: NA
Alternate protein names: Aspartokinase II/homoserine dehydrogenase II; AKII-HDII; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 797; Mature: 796
Protein sequence:
>797_residues MARCHLHKFGGSSLADADCYRRVAHILLTHGHSDDLVVVSAAGKSTNFLYKLLALRDAGQLWQEELQVLTSYQQGLVEQL LSNEQARDLRERLATDQAQLISLLSLDERNEYQVNHVVSFGERWSARLMAALLRESGVAASHVDACSILVADEAAVPQIR VQESRAKVQALLAAHPNERLVITGFICANERGDTLLLGRNGSDFSASLIASLADIERVTIWTDVEGVFNADPNKINDAKL LKSMSLAEADRLARLGSPVLHSRTLQPLFNTEVSLAVRSSYASHTDFTLIAPHSSSASAPVVTNLNAIVLFGFKLTGELT SLLDSLIAAGLTPLAHWTSAHQRVELAYTAENQKQVQRLLDAEAQALGISEQQINTDLGLVALVSADAEHYRRSFARLLS RDAKPLFSGDLSLVTLVPQSQVNLLTQKVHRRCAGPRKRIGVLLLGVGNIGEAWVDLFKSVSPSLDHELEASVELVGLVS SSKALIKSTGINLAAWQTEFNTEATPWQYEHLFEQLERVNCDELVALDISASASLTLQYPELFERGIHVVSANKLAGSGP LPFYRELKQQLGNRRLFWRYNASCGAGLPIQHALNDLRNSGDSVEAVGGIFSGTLCWLFEKYDTSKPFSELVIEARGLGI TEPDPRDDLSGRDMQRKLLILAREIGLEIELEDIELRSLVPADLADIPLDQFLARIAELDADLLQQYGAAAEQNKVLRYV ASLDNSGSELKAEVGLQWIDAHHPYANLTPGDNVFVIRSVFYQGNPLIIRGPGAGREVTAAAVQSDLTQICRDLLQE
Sequences:
>Translated_797_residues MARCHLHKFGGSSLADADCYRRVAHILLTHGHSDDLVVVSAAGKSTNFLYKLLALRDAGQLWQEELQVLTSYQQGLVEQL LSNEQARDLRERLATDQAQLISLLSLDERNEYQVNHVVSFGERWSARLMAALLRESGVAASHVDACSILVADEAAVPQIR VQESRAKVQALLAAHPNERLVITGFICANERGDTLLLGRNGSDFSASLIASLADIERVTIWTDVEGVFNADPNKINDAKL LKSMSLAEADRLARLGSPVLHSRTLQPLFNTEVSLAVRSSYASHTDFTLIAPHSSSASAPVVTNLNAIVLFGFKLTGELT SLLDSLIAAGLTPLAHWTSAHQRVELAYTAENQKQVQRLLDAEAQALGISEQQINTDLGLVALVSADAEHYRRSFARLLS RDAKPLFSGDLSLVTLVPQSQVNLLTQKVHRRCAGPRKRIGVLLLGVGNIGEAWVDLFKSVSPSLDHELEASVELVGLVS SSKALIKSTGINLAAWQTEFNTEATPWQYEHLFEQLERVNCDELVALDISASASLTLQYPELFERGIHVVSANKLAGSGP LPFYRELKQQLGNRRLFWRYNASCGAGLPIQHALNDLRNSGDSVEAVGGIFSGTLCWLFEKYDTSKPFSELVIEARGLGI TEPDPRDDLSGRDMQRKLLILAREIGLEIELEDIELRSLVPADLADIPLDQFLARIAELDADLLQQYGAAAEQNKVLRYV ASLDNSGSELKAEVGLQWIDAHHPYANLTPGDNVFVIRSVFYQGNPLIIRGPGAGREVTAAAVQSDLTQICRDLLQE >Mature_796_residues ARCHLHKFGGSSLADADCYRRVAHILLTHGHSDDLVVVSAAGKSTNFLYKLLALRDAGQLWQEELQVLTSYQQGLVEQLL SNEQARDLRERLATDQAQLISLLSLDERNEYQVNHVVSFGERWSARLMAALLRESGVAASHVDACSILVADEAAVPQIRV QESRAKVQALLAAHPNERLVITGFICANERGDTLLLGRNGSDFSASLIASLADIERVTIWTDVEGVFNADPNKINDAKLL KSMSLAEADRLARLGSPVLHSRTLQPLFNTEVSLAVRSSYASHTDFTLIAPHSSSASAPVVTNLNAIVLFGFKLTGELTS LLDSLIAAGLTPLAHWTSAHQRVELAYTAENQKQVQRLLDAEAQALGISEQQINTDLGLVALVSADAEHYRRSFARLLSR DAKPLFSGDLSLVTLVPQSQVNLLTQKVHRRCAGPRKRIGVLLLGVGNIGEAWVDLFKSVSPSLDHELEASVELVGLVSS SKALIKSTGINLAAWQTEFNTEATPWQYEHLFEQLERVNCDELVALDISASASLTLQYPELFERGIHVVSANKLAGSGPL PFYRELKQQLGNRRLFWRYNASCGAGLPIQHALNDLRNSGDSVEAVGGIFSGTLCWLFEKYDTSKPFSELVIEARGLGIT EPDPRDDLSGRDMQRKLLILAREIGLEIELEDIELRSLVPADLADIPLDQFLARIAELDADLLQQYGAAAEQNKVLRYVA SLDNSGSELKAEVGLQWIDAHHPYANLTPGDNVFVIRSVFYQGNPLIIRGPGAGREVTAAAVQSDLTQICRDLLQE
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0460
COG function: function code E; Homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the homoserine dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790376, Length=805, Percent_Identity=41.9875776397516, Blast_Score=550, Evalue=1e-157, Organism=Escherichia coli, GI1786183, Length=311, Percent_Identity=38.2636655948553, Blast_Score=215, Evalue=9e-57, Organism=Escherichia coli, GI1790455, Length=293, Percent_Identity=32.7645051194539, Blast_Score=118, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6322599, Length=345, Percent_Identity=32.463768115942, Blast_Score=168, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6320893, Length=311, Percent_Identity=25.7234726688103, Blast_Score=92, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 87336; Mature: 87205
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARCHLHKFGGSSLADADCYRRVAHILLTHGHSDDLVVVSAAGKSTNFLYKLLALRDAGQ CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH LWQEELQVLTSYQQGLVEQLLSNEQARDLRERLATDQAQLISLLSLDERNEYQVNHVVSF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEHHHHHHH GERWSARLMAALLRESGVAASHVDACSILVADEAAVPQIRVQESRAKVQALLAAHPNERL HHHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCEE VITGFICANERGDTLLLGRNGSDFSASLIASLADIERVTIWTDVEGVFNADPNKINDAKL EEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHH LKSMSLAEADRLARLGSPVLHSRTLQPLFNTEVSLAVRSSYASHTDFTLIAPHSSSASAP HHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCEEEEHHCCCCCCCEEEEECCCCCCCCC VVTNLNAIVLFGFKLTGELTSLLDSLIAAGLTPLAHWTSAHQRVELAYTAENQKQVQRLL EEECCCEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEECCCHHHHHHHH DAEAQALGISEQQINTDLGLVALVSADAEHYRRSFARLLSRDAKPLFSGDLSLVTLVPQS HHHHHHCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH QVNLLTQKVHRRCAGPRKRIGVLLLGVGNIGEAWVDLFKSVSPSLDHELEASVELVGLVS HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHCCEEEEEEEC SSKALIKSTGINLAAWQTEFNTEATPWQYEHLFEQLERVNCDELVALDISASASLTLQYP CCCHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECH ELFERGIHVVSANKLAGSGPLPFYRELKQQLGNRRLFWRYNASCGAGLPIQHALNDLRNS HHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCC GDSVEAVGGIFSGTLCWLFEKYDTSKPFSELVIEARGLGITEPDPRDDLSGRDMQRKLLI CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH LAREIGLEIELEDIELRSLVPADLADIPLDQFLARIAELDADLLQQYGAAAEQNKVLRYV HHHHHCCEEEEECCHHHHCCCCCHHCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHH ASLDNSGSELKAEVGLQWIDAHHPYANLTPGDNVFVIRSVFYQGNPLIIRGPGAGREVTA HHCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCEEEEEEEHCCCCEEEEECCCCCCHHHH AAVQSDLTQICRDLLQE HHHHHHHHHHHHHHHCC >Mature Secondary Structure ARCHLHKFGGSSLADADCYRRVAHILLTHGHSDDLVVVSAAGKSTNFLYKLLALRDAGQ CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH LWQEELQVLTSYQQGLVEQLLSNEQARDLRERLATDQAQLISLLSLDERNEYQVNHVVSF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEHHHHHHH GERWSARLMAALLRESGVAASHVDACSILVADEAAVPQIRVQESRAKVQALLAAHPNERL HHHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCEE VITGFICANERGDTLLLGRNGSDFSASLIASLADIERVTIWTDVEGVFNADPNKINDAKL EEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHH LKSMSLAEADRLARLGSPVLHSRTLQPLFNTEVSLAVRSSYASHTDFTLIAPHSSSASAP HHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCEEEEHHCCCCCCCEEEEECCCCCCCCC VVTNLNAIVLFGFKLTGELTSLLDSLIAAGLTPLAHWTSAHQRVELAYTAENQKQVQRLL EEECCCEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEECCCHHHHHHHH DAEAQALGISEQQINTDLGLVALVSADAEHYRRSFARLLSRDAKPLFSGDLSLVTLVPQS HHHHHHCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCH QVNLLTQKVHRRCAGPRKRIGVLLLGVGNIGEAWVDLFKSVSPSLDHELEASVELVGLVS HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHCCEEEEEEEC SSKALIKSTGINLAAWQTEFNTEATPWQYEHLFEQLERVNCDELVALDISASASLTLQYP CCCHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECH ELFERGIHVVSANKLAGSGPLPFYRELKQQLGNRRLFWRYNASCGAGLPIQHALNDLRNS HHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCC GDSVEAVGGIFSGTLCWLFEKYDTSKPFSELVIEARGLGITEPDPRDDLSGRDMQRKLLI CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH LAREIGLEIELEDIELRSLVPADLADIPLDQFLARIAELDADLLQQYGAAAEQNKVLRYV HHHHHCCEEEEECCHHHHCCCCCHHCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHH ASLDNSGSELKAEVGLQWIDAHHPYANLTPGDNVFVIRSVFYQGNPLIIRGPGAGREVTA HHCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCEEEEEEEHCCCCEEEEECCCCCCHHHH AAVQSDLTQICRDLLQE HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6298218; 8346018; 9278503 [H]