| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873604
Identifier: 160873604
GI number: 160873604
Start: 552147
End: 552923
Strand: Reverse
Name: 160873604
Synonym: Sbal195_0482
Alternate gene names: NA
Gene position: 552923-552147 (Counterclockwise)
Preceding gene: 160873605
Following gene: 160873602
Centisome position: 10.34
GC content: 46.72
Gene sequence:
>777_bases ATGAGGCTGATACTGATAATCGTCATTTCATGCTTATTTCTGCCCCAAGCGAGAGCAGAAACCTCTGCTATTGTCTGGCA AGCACACTGCCGCGATAGGCATCCTGTTATTTATTTCGAAAATGGTGAGTGCAAAGGCCCAGGTGCTGCGGTGATCAATC AAGTTATCACCCGTCTAGGTCACAAGGTAAATTGGAGTAATGTGCCTTGGGCACGCACGATAAAAGTCGCCGAAACGGGA CAAGTCGACCTCATTCCCGTCCATTCGATGACACCCGAGCGCAACGATTTTCTGGACCCTATGCTACTGGGCTACGACAA GCGCTACGTCTATTACTTTGCCCTTACGAATCGACAGCTTGAGGCCAAAAATTTCGATGAATTAAAGCCTTATATCATTG GCGCACTCAGAGGCGCTTTTTACTGTCCGCAGTTCAATGACAATCAAAACCAACTAAAAGTGTCTTTTGTTAATGATAAC GGTCAGTTAATCAATATGTTGAAGGCTGGACGTATCGATTTAGCCATCACCTCTGAACAACATGAAATGCAATTCTTTGC TAACGATCCCCAGCTTAAGCAAATGGAATACGTCGACATCAGCAAGAACGGTCGCTATTTCAGCATTCCGCTCATGTCGC CGCTGCATCAATATGCCAAGCAAGTTCACCAGATAGTCGACGACATGCGCACCTCAGGCGAAATCACTCGGCTATTTGAA TCCTATGGTGTCGAGCCTCCGCTTAATCTCACTGAATCGCCCTTAGCGACTCACTGA
Upstream 100 bases:
>100_bases ATTCACTAAACCTGTACGGCTAAATGACTAGACATAAAACCTAGTCGGATTAACTGTCCAGCCCGATAATTAAAACTGAC CATTTTAATAGGCAAGATGA
Downstream 100 bases:
>100_bases TCTGAATACTGATAACCCAAAACTAACTTGGAATTAATGCGCGCGTGCGGCTAAATGCCGTAACAAGGCTGCCAGCGTTG GCGCAATCGTCTGATGGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MRLILIIVISCLFLPQARAETSAIVWQAHCRDRHPVIYFENGECKGPGAAVINQVITRLGHKVNWSNVPWARTIKVAETG QVDLIPVHSMTPERNDFLDPMLLGYDKRYVYYFALTNRQLEAKNFDELKPYIIGALRGAFYCPQFNDNQNQLKVSFVNDN GQLINMLKAGRIDLAITSEQHEMQFFANDPQLKQMEYVDISKNGRYFSIPLMSPLHQYAKQVHQIVDDMRTSGEITRLFE SYGVEPPLNLTESPLATH
Sequences:
>Translated_258_residues MRLILIIVISCLFLPQARAETSAIVWQAHCRDRHPVIYFENGECKGPGAAVINQVITRLGHKVNWSNVPWARTIKVAETG QVDLIPVHSMTPERNDFLDPMLLGYDKRYVYYFALTNRQLEAKNFDELKPYIIGALRGAFYCPQFNDNQNQLKVSFVNDN GQLINMLKAGRIDLAITSEQHEMQFFANDPQLKQMEYVDISKNGRYFSIPLMSPLHQYAKQVHQIVDDMRTSGEITRLFE SYGVEPPLNLTESPLATH >Mature_258_residues MRLILIIVISCLFLPQARAETSAIVWQAHCRDRHPVIYFENGECKGPGAAVINQVITRLGHKVNWSNVPWARTIKVAETG QVDLIPVHSMTPERNDFLDPMLLGYDKRYVYYFALTNRQLEAKNFDELKPYIIGALRGAFYCPQFNDNQNQLKVSFVNDN GQLINMLKAGRIDLAITSEQHEMQFFANDPQLKQMEYVDISKNGRYFSIPLMSPLHQYAKQVHQIVDDMRTSGEITRLFE SYGVEPPLNLTESPLATH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29588; Mature: 29588
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLILIIVISCLFLPQARAETSAIVWQAHCRDRHPVIYFENGECKGPGAAVINQVITRLG CEEHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC HKVNWSNVPWARTIKVAETGQVDLIPVHSMTPERNDFLDPMLLGYDKRYVYYFALTNRQL CCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEEEEECCEE EAKNFDELKPYIIGALRGAFYCPQFNDNQNQLKVSFVNDNGQLINMLKAGRIDLAITSEQ CCCCCHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCEEHEECCCCEEEEEECCC HEMQFFANDPQLKQMEYVDISKNGRYFSIPLMSPLHQYAKQVHQIVDDMRTSGEITRLFE CEEEEECCCCCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SYGVEPPLNLTESPLATH HHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLILIIVISCLFLPQARAETSAIVWQAHCRDRHPVIYFENGECKGPGAAVINQVITRLG CEEHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC HKVNWSNVPWARTIKVAETGQVDLIPVHSMTPERNDFLDPMLLGYDKRYVYYFALTNRQL CCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEEEEECCEE EAKNFDELKPYIIGALRGAFYCPQFNDNQNQLKVSFVNDNGQLINMLKAGRIDLAITSEQ CCCCCHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCEEHEECCCCEEEEEECCC HEMQFFANDPQLKQMEYVDISKNGRYFSIPLMSPLHQYAKQVHQIVDDMRTSGEITRLFE CEEEEECCCCCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SYGVEPPLNLTESPLATH HHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA