BacMap

Definition	Shewanella baltica OS195 chromosome, complete genome.
Accession	NC_009997
Length	5,347,283

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The map label for this gene is ucpA [C]

Identifier: 160873602

GI number: 160873602

Start: 550352

End: 551083

Strand: Reverse

Name: ucpA [C]

Synonym: Sbal195_0480

Alternate gene names: 160873602

Gene position: 551083-550352 (Counterclockwise)

Preceding gene: 160873604

Following gene: 160873601

Centisome position: 10.31

GC content: 50.0

Gene sequence:

>732_bases
ATGAATCAAGTTACTAAATCACTGGTTGTCATCACGGGCGCTTCATCGGGTATTGGCGCCGCTATGGCCAAAAGTTTTAG
CGCCGCAGGCCACCCACTGTTATTACTGGCACGCCGGGTTGAAGCAATGCAAGCACTTGAATTACCTAACAGCCTCTCTA
TCAGCGTCGATGTCACCGACACTGCAGCCATTAAAACCGCCATAACTCAAGCAGAAGCACAATTTGGCCCTGTCGGCTGT
CTTATCAATAACGCGGGTGTGATGTTGCTGGGTCAGATCGATGTGCAAGATCCTAACGAATGGAGCCGCATGCTCAATAT
CAATGTGATGGGCGTGCTTAATGGCATTCATGCGGTATTAGCCGACATGAAAGCTCGCAAAACTGGCACTATCATTAATG
TCAGCTCAGTGGCGGGGCGTAAAACCTTTCCAAACCACGCTGCTTACTGCGCCACTAAATTTGCCGTGCACGCCTTAACA
GAAAACATTCGTGAAGAAGTCGCCATGGATGACGTACGCCTTATCACTATCGCCCCCGGCGCAGTAGAAACTGAGTTGCT
AAGTCATACCACCAGCGATGACATTAAAGCCGGTTACCATGACTGGAAAGAAGAAATGGGCGGCGTTATCGCGCCTGAAA
ACGTCGCCGCTGCCGCACTATTTGCATGGCAACAACCGCAAAATGTGTGCATACGCGAAATCGTTTTAGCGCCAACACGC
CAACAACCTTAA

Upstream 100 bases:

>100_bases
TTCGGCTAAAAATCCCCAGCCTATACTGATTGCCAACTTAAAGACGCCGAACAACAGTTTGTTTACGGCTCAGATTGGCT
TCAATTAATAGGAAATACTA

Downstream 100 bases:

>100_bases
TCCGTCTCGAGTCCGTATTCGCCTAGACTGTTTAGGCGAATACGGCTCAGAAACACTCATCAACCCAAGCCAAAAACTAA
AAATATCAGATCATGCTCTG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNQVTKSLVVITGASSGIGAAMAKSFSAAGHPLLLLARRVEAMQALELPNSLSISVDVTDTAAIKTAITQAEAQFGPVGC
LINNAGVMLLGQIDVQDPNEWSRMLNINVMGVLNGIHAVLADMKARKTGTIINVSSVAGRKTFPNHAAYCATKFAVHALT
ENIREEVAMDDVRLITIAPGAVETELLSHTTSDDIKAGYHDWKEEMGGVIAPENVAAAALFAWQQPQNVCIREIVLAPTR
QQP

Sequences:

>Translated_243_residues
MNQVTKSLVVITGASSGIGAAMAKSFSAAGHPLLLLARRVEAMQALELPNSLSISVDVTDTAAIKTAITQAEAQFGPVGC
LINNAGVMLLGQIDVQDPNEWSRMLNINVMGVLNGIHAVLADMKARKTGTIINVSSVAGRKTFPNHAAYCATKFAVHALT
ENIREEVAMDDVRLITIAPGAVETELLSHTTSDDIKAGYHDWKEEMGGVIAPENVAAAALFAWQQPQNVCIREIVLAPTR
QQP
>Mature_243_residues
MNQVTKSLVVITGASSGIGAAMAKSFSAAGHPLLLLARRVEAMQALELPNSLSISVDVTDTAAIKTAITQAEAQFGPVGC
LINNAGVMLLGQIDVQDPNEWSRMLNINVMGVLNGIHAVLADMKARKTGTIINVSSVAGRKTFPNHAAYCATKFAVHALT
ENIREEVAMDDVRLITIAPGAVETELLSHTTSDDIKAGYHDWKEEMGGVIAPENVAAAALFAWQQPQNVCIREIVLAPTR
QQP

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=244, Percent_Identity=31.5573770491803, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI109715829, Length=258, Percent_Identity=30.2325581395349, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI4503817, Length=210, Percent_Identity=34.7619047619048, Blast_Score=99, Evalue=2e-21,
Organism=Homo sapiens, GI7706318, Length=204, Percent_Identity=27.9411764705882, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI22507405, Length=195, Percent_Identity=31.2820512820513, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI223718074, Length=194, Percent_Identity=32.9896907216495, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI31542939, Length=221, Percent_Identity=27.1493212669683, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI7705925, Length=216, Percent_Identity=30.0925925925926, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI4758504, Length=199, Percent_Identity=33.1658291457286, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI19743808, Length=213, Percent_Identity=27.6995305164319, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI40254992, Length=219, Percent_Identity=26.4840182648402, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI50726952, Length=186, Percent_Identity=29.0322580645161, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI4557649, Length=193, Percent_Identity=27.979274611399, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI150247226, Length=195, Percent_Identity=27.1794871794872, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI157739938, Length=192, Percent_Identity=26.0416666666667, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI224922801, Length=171, Percent_Identity=28.0701754385965, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI142976729, Length=228, Percent_Identity=25.8771929824561, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI166795268, Length=209, Percent_Identity=28.7081339712919, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI40548397, Length=192, Percent_Identity=28.125, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI214010158, Length=192, Percent_Identity=28.125, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI214010156, Length=192, Percent_Identity=28.125, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI22758144, Length=192, Percent_Identity=28.125, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI226371731, Length=194, Percent_Identity=27.319587628866, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI44680136, Length=184, Percent_Identity=24.4565217391304, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI44680133, Length=184, Percent_Identity=24.4565217391304, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI17738292, Length=184, Percent_Identity=24.4565217391304, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI59889578, Length=209, Percent_Identity=27.7511961722488, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI7705855, Length=193, Percent_Identity=28.4974093264249, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI83715985, Length=179, Percent_Identity=31.8435754189944, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI7657478, Length=188, Percent_Identity=26.5957446808511, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI87082100, Length=194, Percent_Identity=36.5979381443299, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787820, Length=243, Percent_Identity=30.8641975308642, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787335, Length=194, Percent_Identity=30.4123711340206, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1790717, Length=195, Percent_Identity=29.7435897435897, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786812, Length=237, Percent_Identity=25.7383966244726, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082160, Length=189, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI2367175, Length=193, Percent_Identity=27.979274611399, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1786701, Length=200, Percent_Identity=27.5, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=205, Percent_Identity=31.219512195122, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71994600, Length=206, Percent_Identity=28.6407766990291, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115534660, Length=191, Percent_Identity=27.7486910994764, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17538182, Length=208, Percent_Identity=28.8461538461538, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17567345, Length=190, Percent_Identity=25.7894736842105, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32563809, Length=208, Percent_Identity=26.9230769230769, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17507613, Length=208, Percent_Identity=26.9230769230769, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=196, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=243, Percent_Identity=26.7489711934156, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=199, Percent_Identity=28.1407035175879, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=198, Percent_Identity=25.7575757575758, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=242, Percent_Identity=26.8595041322314, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=193, Percent_Identity=25.9067357512953, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI72000259, Length=199, Percent_Identity=27.6381909547739, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=193, Percent_Identity=26.9430051813472, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17557780, Length=195, Percent_Identity=28.7179487179487, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559104, Length=198, Percent_Identity=26.2626262626263, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17560150, Length=240, Percent_Identity=27.5, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17570069, Length=218, Percent_Identity=26.1467889908257, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=255, Percent_Identity=26.2745098039216, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=260, Percent_Identity=24.2307692307692, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=260, Percent_Identity=35, Blast_Score=131, Evalue=8e-32,
Organism=Saccharomyces cerevisiae, GI6322227, Length=191, Percent_Identity=26.1780104712042, Blast_Score=68, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322067, Length=188, Percent_Identity=29.2553191489362, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI116007236, Length=246, Percent_Identity=31.3008130081301, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24641232, Length=255, Percent_Identity=28.2352941176471, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI281364494, Length=255, Percent_Identity=29.0196078431373, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI116007234, Length=255, Percent_Identity=30.1960784313725, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24663911, Length=255, Percent_Identity=30.5882352941176, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24641388, Length=260, Percent_Identity=31.1538461538462, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI28571387, Length=253, Percent_Identity=31.6205533596838, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI21358495, Length=195, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI21357041, Length=193, Percent_Identity=30.0518134715026, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI23397609, Length=188, Percent_Identity=35.1063829787234, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28571526, Length=202, Percent_Identity=30.6930693069307, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24643142, Length=194, Percent_Identity=28.3505154639175, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI281364892, Length=199, Percent_Identity=30.6532663316583, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24648944, Length=244, Percent_Identity=29.0983606557377, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI116007238, Length=173, Percent_Identity=34.1040462427746, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24644339, Length=187, Percent_Identity=33.1550802139037, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24648693, Length=258, Percent_Identity=27.906976744186, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI21355889, Length=258, Percent_Identity=27.906976744186, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24640492, Length=196, Percent_Identity=29.5918367346939, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI116007232, Length=182, Percent_Identity=34.0659340659341, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24584748, Length=203, Percent_Identity=28.0788177339901, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI161076933, Length=203, Percent_Identity=28.0788177339901, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21356301, Length=235, Percent_Identity=30.2127659574468, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355319, Length=228, Percent_Identity=24.1228070175439, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580925, Length=204, Percent_Identity=28.921568627451, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17737361, Length=200, Percent_Identity=28.5, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24584744, Length=189, Percent_Identity=26.4550264550265, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574402, Length=189, Percent_Identity=26.4550264550265, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24639444, Length=195, Percent_Identity=26.1538461538462, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24649181, Length=195, Percent_Identity=26.1538461538462, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24651139, Length=194, Percent_Identity=25.2577319587629, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI21355631, Length=177, Percent_Identity=23.1638418079096, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25836; Mature: 25836

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQVTKSLVVITGASSGIGAAMAKSFSAAGHPLLLLARRVEAMQALELPNSLSISVDVTD
CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECC
TAAIKTAITQAEAQFGPVGCLINNAGVMLLGQIDVQDPNEWSRMLNINVMGVLNGIHAVL
HHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCCHHHHHEEEEEHHHHHHHHHHHH
ADMKARKTGTIINVSSVAGRKTFPNHAAYCATKFAVHALTENIREEVAMDDVRLITIAPG
HHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
AVETELLSHTTSDDIKAGYHDWKEEMGGVIAPENVAAAALFAWQQPQNVCIREIVLAPTR
CHHHHHHHCCCCCHHHCCHHHHHHHHCCEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
QQP
CCC
>Mature Secondary Structure
MNQVTKSLVVITGASSGIGAAMAKSFSAAGHPLLLLARRVEAMQALELPNSLSISVDVTD
CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECC
TAAIKTAITQAEAQFGPVGCLINNAGVMLLGQIDVQDPNEWSRMLNINVMGVLNGIHAVL
HHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCCHHHHHEEEEEHHHHHHHHHHHH
ADMKARKTGTIINVSSVAGRKTFPNHAAYCATKFAVHALTENIREEVAMDDVRLITIAPG
HHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
AVETELLSHTTSDDIKAGYHDWKEEMGGVIAPENVAAAALFAWQQPQNVCIREIVLAPTR
CHHHHHHHCCCCCHHHCCHHHHHHHHCCEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
QQP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA