| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pyrE [H]
Identifier: 160873507
GI number: 160873507
Start: 435043
End: 435684
Strand: Direct
Name: pyrE [H]
Synonym: Sbal195_0382
Alternate gene names: 160873507
Gene position: 435043-435684 (Clockwise)
Preceding gene: 160873506
Following gene: 160873513
Centisome position: 8.14
GC content: 47.82
Gene sequence:
>642_bases GTGAAAGCCTATCAACGTGAGTTTATTGAATTTGCCTTAGAACGTCAGGTGTTGCGATTTGGCGAATTTACCCTTAAATC GGGTCGTATCAGTCCTTATTTCTTCAATGCGGGTTTGTTCAATACTGGCCGTGACTTAGCGCGTTTAGGCCGTTTCTATG CCGCTGCGTTAGTGGATTCTGGCATTGATTACGATTTGCTGTTTGGCCCAGCTTATAAAGGCATTCCAATTGCGACCACT ACGGCGGTTGCCCTGTGTGAACACCACGATATCGATATCCCTTACTGCTTTAACCGCAAAGAGAAAAAAGATCACGGCGA AGGTGGCAGCTTAGTCGGTAGCGAGCTGAAAGGCCGCGTTATGTTGGTGGATGATGTGATCACTGCCGGTACTGCGATTC GTGAGTCGATGGAAATCATCGAGGCCCATAAAGCTCAATTAGCGGGCGTGTTGATTGCCTTAGATAGACAAGAGAAAGGC AAGGGCGAGTTATCGGCTATTCAAGAGGTTGAGCGTGATTTTGGCTGCGGCATTGTGGCGATCATTAAACTTGCCGACCT CATTAGCTATCTGTCTGAAAAGCCTGGAATGGAAGTGCAACTTGCCGCCGTGAGTAAGTACCGCGAGCAATACGGTATTT AA
Upstream 100 bases:
>100_bases AAGATGCTAGTGTTAGACAAGCCCTGTACCGAATTAAATGTTGCCTAATAAAACATTACCTAATAAAAACCAATAAAAGA CAAAGCCGTAAGGAGATATT
Downstream 100 bases:
>100_bases ATCGAGTGCTTAGACGCTGGTATTGATCAAGTGGCTATTATTGGCGTGGTGAAATCAGTTAATCAGCCAGCATTGATCTT AGCTAGGTTGAGAAAGGTTT
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKAYQREFIEFALERQVLRFGEFTLKSGRISPYFFNAGLFNTGRDLARLGRFYAAALVDSGIDYDLLFGPAYKGIPIATT TAVALCEHHDIDIPYCFNRKEKKDHGEGGSLVGSELKGRVMLVDDVITAGTAIRESMEIIEAHKAQLAGVLIALDRQEKG KGELSAIQEVERDFGCGIVAIIKLADLISYLSEKPGMEVQLAAVSKYREQYGI
Sequences:
>Translated_213_residues MKAYQREFIEFALERQVLRFGEFTLKSGRISPYFFNAGLFNTGRDLARLGRFYAAALVDSGIDYDLLFGPAYKGIPIATT TAVALCEHHDIDIPYCFNRKEKKDHGEGGSLVGSELKGRVMLVDDVITAGTAIRESMEIIEAHKAQLAGVLIALDRQEKG KGELSAIQEVERDFGCGIVAIIKLADLISYLSEKPGMEVQLAAVSKYREQYGI >Mature_213_residues MKAYQREFIEFALERQVLRFGEFTLKSGRISPYFFNAGLFNTGRDLARLGRFYAAALVDSGIDYDLLFGPAYKGIPIATT TAVALCEHHDIDIPYCFNRKEKKDHGEGGSLVGSELKGRVMLVDDVITAGTAIRESMEIIEAHKAQLAGVLIALDRQEKG KGELSAIQEVERDFGCGIVAIIKLADLISYLSEKPGMEVQLAAVSKYREQYGI
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=153, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=7e-16, Organism=Escherichia coli, GI1790073, Length=213, Percent_Identity=79.3427230046948, Blast_Score=356, Evalue=1e-100, Organism=Caenorhabditis elegans, GI17508631, Length=163, Percent_Identity=28.8343558282209, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323530, Length=220, Percent_Identity=48.6363636363636, Blast_Score=203, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6323927, Length=221, Percent_Identity=44.3438914027149, Blast_Score=190, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 23558; Mature: 23558
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAYQREFIEFALERQVLRFGEFTLKSGRISPYFFNAGLFNTGRDLARLGRFYAAALVDS CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHC GIDYDLLFGPAYKGIPIATTTAVALCEHHDIDIPYCFNRKEKKDHGEGGSLVGSELKGRV CCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCE MLVDDVITAGTAIRESMEIIEAHKAQLAGVLIALDRQEKGKGELSAIQEVERDFGCGIVA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCCHHHH IIKLADLISYLSEKPGMEVQLAAVSKYREQYGI HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure MKAYQREFIEFALERQVLRFGEFTLKSGRISPYFFNAGLFNTGRDLARLGRFYAAALVDS CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHC GIDYDLLFGPAYKGIPIATTTAVALCEHHDIDIPYCFNRKEKKDHGEGGSLVGSELKGRV CCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCE MLVDDVITAGTAIRESMEIIEAHKAQLAGVLIALDRQEKGKGELSAIQEVERDFGCGIVA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCCHHHH IIKLADLISYLSEKPGMEVQLAAVSKYREQYGI HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]