| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is recG [H]
Identifier: 160873476
GI number: 160873476
Start: 397301
End: 399391
Strand: Reverse
Name: recG [H]
Synonym: Sbal195_0351
Alternate gene names: 160873476
Gene position: 399391-397301 (Counterclockwise)
Preceding gene: 160873477
Following gene: 160873475
Centisome position: 7.47
GC content: 52.56
Gene sequence:
>2091_bases TTGAGTGCTAACGACTTGCAGCAATTGGATCTTGTTCCGATCACCGACCTCAAAGGCGTCGCCAAAAAGGTCGCGGAGAA ACTCGCAAAGCTCGGCATCACAACAGTACAAGACCTGCTGTTTCACTTACCCCTGCGCTACGAAGACAGAACCCAAATCT ATCCGATTGCCGCCCTTATGCCCGGCAGTTACGGCACCATAGAGGCTGAAATCCAATCGACGCAAATCATCCAAGGCCGC AAGCGTATGCTGGTCTGCAATGTGCGCGACGATACGGGCAGCTTGAGCCTGCGCTTTTTCAACTTTTCTGTCGCCCAGCG TAATGCCATGCAAAATGGTTTAATGATCCGCGCCTACGGTGAAGTGCGCCGTGGCGGCCATCAAGCTGAGATAGTGCATC CAGAATATAAAGTCGTGTATCCCGGTGAAGATGTTCACCTAAGCGATACCCTAACGCCGATTTATCCCACAACTGAGGGC TTAAAACAGGCGAGTTGGCTCAAGCTGACCGAGCAAGCTTTGGTATTACTGGAAGATGGCGGCTTAACTGAGCTGCTGCC ACCGCAGTTGCAACCGAATAACATCAGCCTTAAACAAGCGTTGCAAACGCTGCATCGACCTCCTGCGGGGATCTCTCAGT TCGATTTAGAGTTAGGTCAACACCCAGCCCAGCAGCGACTGGTGCAGGAAGAGTTACTCGCTCATAATCTCAGCATGCTA CGCCTAAGGCAGCGCAGTAATTTAGATGCAGCGGTGACCATGCAGGCCACGGGGCAATTGCTCAATCCCTTCCTTGCCGC TTTGCCCTTTAAACCCACGGGCGCCCAGCAAAGAGTGGTGGCCGATATAGGCAAAGATTTAGAAAAACCGCACCCTATGA TGCGCTTAGTACAAGGGGATGTAGGTTCAGGTAAAACCTTAGTCGCGGCGATGGCTGCGCTGCAAGCGATTGAAAACGGT TATCAAGTTGCCATGATGGCGCCGACCGAGCTATTGGCCGAGCAACATGCAACTAACTTTGCCGCTTGGTTTGAGCCACT CGGGCTTAAAGTCGGTTGGCTAGCCGGTAAACTTAAAGGCAAGGCAAGAGCGCAATCCCTTGCGGATATTGAATCCGGCG CAGCCCAAATGGTGATTGGCACCCATGCCATCTTCCAGCAGCATGTGGTCTTTAATAAACTCGGGTTAATTATCATAGAT GAGCAGCACAGATTCGGCGTACACCAACGCTTAGGTCTGCGGGAAAAGGGCGTGAGCCAAGGTTTCCATCCGCATCAATT GATCATGACGGCAACGCCGATCCCGCGCACGCTAGCGATGACAGCCTATGCGGATCTCGACACATCCATTATCGATGAAC TGCCGCCGGGACGGACACCCGTGACCACAGTGGCGATTGCCGATTCTCGCCGCAACGAAGTGCTTGAACGGGTGCGTAAC GCCGTCATCACAGATAAACGTCAGGCCTATTGGGTGTGTACTTTGATTGAAGAATCCGAAGTGCTCGAATGCCAAGCCGC CGAAGACACGGCCGAAGAACTGCGCCTCGCCCTACCCGAGCTCAATATTGGCCTAGTGCATGGCAGGTTGAAGAGCGCTG AGAAACAACAAATCATGGCCGATTTTAAGGCGGGCATCATTCATCTTCTGGTGGCGACAACAGTGATTGAAGTGGGCGTC GATGTGCCTAATTCCAGCCTGATGATCATTGAAAACCCTGAACGTTTAGGCTTAGCACAACTACACCAACTACGCGGACG AGTCGGCCGAGGCGCCATCGCAAGCCATTGTGTGTTACTCTACAAGGCGCCATTGAGCCATACCGCCACCCAAAGACTGA GTGTACTCAGGCAAAGTAATGACGGTTTCATCATAGCGCAGAAAGATTTAGAAATTCGTGGCCCAGGTGAAGTGCTTGGC ACTAAGCAAACGGGACTGGCCGAGCTGAAAATTGCCGATCTGGTGCGCGATCAAGCTTTGATCCCGCACATTCAAAAACT GGCAAATCATGTGATGGCGCAGGCCCCCGAAAAAGTCGATGCGATAATCTTACGTTGGCTCGGGCACAAGCAGCACTATG TGCAGGCTTAG
Upstream 100 bases:
>100_bases CCGCAAACTGACGTTAGTTATGCTGGCAAATAAGTCCCTCATTCTGCTTGAGATTGCCTTACGCTTATTCTCTGTTAATA TATGTATAAATTCACAGTGA
Downstream 100 bases:
>100_bases GCAGTAAAGGGTAAAGGCCGAGGAGTGACATCTGCCTCGATACTCAAAATAAATTGTTTATGTTCAGCTAAGCGCTATAG ACAAGCGCATGGAAACTTGC
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 696; Mature: 695
Protein sequence:
>696_residues MSANDLQQLDLVPITDLKGVAKKVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALMPGSYGTIEAEIQSTQIIQGR KRMLVCNVRDDTGSLSLRFFNFSVAQRNAMQNGLMIRAYGEVRRGGHQAEIVHPEYKVVYPGEDVHLSDTLTPIYPTTEG LKQASWLKLTEQALVLLEDGGLTELLPPQLQPNNISLKQALQTLHRPPAGISQFDLELGQHPAQQRLVQEELLAHNLSML RLRQRSNLDAAVTMQATGQLLNPFLAALPFKPTGAQQRVVADIGKDLEKPHPMMRLVQGDVGSGKTLVAAMAALQAIENG YQVAMMAPTELLAEQHATNFAAWFEPLGLKVGWLAGKLKGKARAQSLADIESGAAQMVIGTHAIFQQHVVFNKLGLIIID EQHRFGVHQRLGLREKGVSQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIADSRRNEVLERVRN AVITDKRQAYWVCTLIEESEVLECQAAEDTAEELRLALPELNIGLVHGRLKSAEKQQIMADFKAGIIHLLVATTVIEVGV DVPNSSLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLLYKAPLSHTATQRLSVLRQSNDGFIIAQKDLEIRGPGEVLG TKQTGLAELKIADLVRDQALIPHIQKLANHVMAQAPEKVDAIILRWLGHKQHYVQA
Sequences:
>Translated_696_residues MSANDLQQLDLVPITDLKGVAKKVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALMPGSYGTIEAEIQSTQIIQGR KRMLVCNVRDDTGSLSLRFFNFSVAQRNAMQNGLMIRAYGEVRRGGHQAEIVHPEYKVVYPGEDVHLSDTLTPIYPTTEG LKQASWLKLTEQALVLLEDGGLTELLPPQLQPNNISLKQALQTLHRPPAGISQFDLELGQHPAQQRLVQEELLAHNLSML RLRQRSNLDAAVTMQATGQLLNPFLAALPFKPTGAQQRVVADIGKDLEKPHPMMRLVQGDVGSGKTLVAAMAALQAIENG YQVAMMAPTELLAEQHATNFAAWFEPLGLKVGWLAGKLKGKARAQSLADIESGAAQMVIGTHAIFQQHVVFNKLGLIIID EQHRFGVHQRLGLREKGVSQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIADSRRNEVLERVRN AVITDKRQAYWVCTLIEESEVLECQAAEDTAEELRLALPELNIGLVHGRLKSAEKQQIMADFKAGIIHLLVATTVIEVGV DVPNSSLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLLYKAPLSHTATQRLSVLRQSNDGFIIAQKDLEIRGPGEVLG TKQTGLAELKIADLVRDQALIPHIQKLANHVMAQAPEKVDAIILRWLGHKQHYVQA >Mature_695_residues SANDLQQLDLVPITDLKGVAKKVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALMPGSYGTIEAEIQSTQIIQGRK RMLVCNVRDDTGSLSLRFFNFSVAQRNAMQNGLMIRAYGEVRRGGHQAEIVHPEYKVVYPGEDVHLSDTLTPIYPTTEGL KQASWLKLTEQALVLLEDGGLTELLPPQLQPNNISLKQALQTLHRPPAGISQFDLELGQHPAQQRLVQEELLAHNLSMLR LRQRSNLDAAVTMQATGQLLNPFLAALPFKPTGAQQRVVADIGKDLEKPHPMMRLVQGDVGSGKTLVAAMAALQAIENGY QVAMMAPTELLAEQHATNFAAWFEPLGLKVGWLAGKLKGKARAQSLADIESGAAQMVIGTHAIFQQHVVFNKLGLIIIDE QHRFGVHQRLGLREKGVSQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIADSRRNEVLERVRNA VITDKRQAYWVCTLIEESEVLECQAAEDTAEELRLALPELNIGLVHGRLKSAEKQQIMADFKAGIIHLLVATTVIEVGVD VPNSSLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLLYKAPLSHTATQRLSVLRQSNDGFIIAQKDLEIRGPGEVLGT KQTGLAELKIADLVRDQALIPHIQKLANHVMAQAPEKVDAIILRWLGHKQHYVQA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI31542656, Length=317, Percent_Identity=26.1829652996845, Blast_Score=68, Evalue=4e-11, Organism=Escherichia coli, GI2367254, Length=688, Percent_Identity=66.1337209302326, Blast_Score=910, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=390, Percent_Identity=38.7179487179487, Blast_Score=235, Evalue=6e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 76664; Mature: 76533
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANDLQQLDLVPITDLKGVAKKVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEEEEC PGSYGTIEAEIQSTQIIQGRKRMLVCNVRDDTGSLSLRFFNFSVAQRNAMQNGLMIRAYG CCCCCEEEEEHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEHHHHHHHHHCCCEEEEEH EVRRGGHQAEIVHPEYKVVYPGEDVHLSDTLTPIYPTTEGLKQASWLKLTEQALVLLEDG HHHCCCCCEEEECCCEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECC GLTELLPPQLQPNNISLKQALQTLHRPPAGISQFDLELGQHPAQQRLVQEELLAHNLSML CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH RLRQRSNLDAAVTMQATGQLLNPFLAALPFKPTGAQQRVVADIGKDLEKPHPMMRLVQGD HHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCC VGSGKTLVAAMAALQAIENGYQVAMMAPTELLAEQHATNFAAWFEPLGLKVGWLAGKLKG CCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCHHHHHHHHCCCEEEEHHHHHCC KARAQSLADIESGAAQMVIGTHAIFQQHVVFNKLGLIIIDEQHRFGVHQRLGLREKGVSQ HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCEEEECCCHHCCHHHHCCCCHHHHCC GFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIADSRRNEVLERVRN CCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHH AVITDKRQAYWVCTLIEESEVLECQAAEDTAEELRLALPELNIGLVHGRLKSAEKQQIMA HHHCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHH DFKAGIIHLLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLL HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHEEEE YKAPLSHTATQRLSVLRQSNDGFIIAQKDLEIRGPGEVLGTKQTGLAELKIADLVRDQAL EECCCCHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH IPHIQKLANHVMAQAPEKVDAIILRWLGHKQHYVQA HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure SANDLQQLDLVPITDLKGVAKKVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEEEEC PGSYGTIEAEIQSTQIIQGRKRMLVCNVRDDTGSLSLRFFNFSVAQRNAMQNGLMIRAYG CCCCCEEEEEHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEHHHHHHHHHCCCEEEEEH EVRRGGHQAEIVHPEYKVVYPGEDVHLSDTLTPIYPTTEGLKQASWLKLTEQALVLLEDG HHHCCCCCEEEECCCEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECC GLTELLPPQLQPNNISLKQALQTLHRPPAGISQFDLELGQHPAQQRLVQEELLAHNLSML CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH RLRQRSNLDAAVTMQATGQLLNPFLAALPFKPTGAQQRVVADIGKDLEKPHPMMRLVQGD HHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCC VGSGKTLVAAMAALQAIENGYQVAMMAPTELLAEQHATNFAAWFEPLGLKVGWLAGKLKG CCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCHHHHHHHHCCCEEEEHHHHHCC KARAQSLADIESGAAQMVIGTHAIFQQHVVFNKLGLIIIDEQHRFGVHQRLGLREKGVSQ HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCEEEECCCHHCCHHHHCCCCHHHHCC GFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIADSRRNEVLERVRN CCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHH AVITDKRQAYWVCTLIEESEVLECQAAEDTAEELRLALPELNIGLVHGRLKSAEKQQIMA HHHCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHH DFKAGIIHLLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLL HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHEEEE YKAPLSHTATQRLSVLRQSNDGFIIAQKDLEIRGPGEVLGTKQTGLAELKIADLVRDQAL EECCCCHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH IPHIQKLANHVMAQAPEKVDAIILRWLGHKQHYVQA HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]