| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873252
Identifier: 160873252
GI number: 160873252
Start: 146863
End: 147666
Strand: Reverse
Name: 160873252
Synonym: Sbal195_0126
Alternate gene names: NA
Gene position: 147666-146863 (Counterclockwise)
Preceding gene: 160873253
Following gene: 160873250
Centisome position: 2.76
GC content: 50.5
Gene sequence:
>804_bases ATGTGCATACTCTTTGTCGCCATTAATGCCCATCCTAAGTATCCCTTAATCATCTGTGCCAACCGTGACGAGTTTCACCA TAGACCGACCGCGCCAGCGCATTTTTGGCCACCAGAAGAAAACATACTCGCAGGTAAAGATCTGCAGGCGGGCGGCACTT GGTTTGGGGTGAATAAACAGGGACAAGTCGCCGCTGTGACAAATCTGCGCGTACCGCAAAAAAAACCAGAAGCCATGCGT AGCCGTGGCGAACTCATCACTATGACGCTCAACTCTGGGTCGCTCGTGTGCCCGAATTGGCTCATTGAGCACAGTGACAA TTATCAGCCATTCAATCTCATCTTCGGCCAAGGTACTGACTTATATTGTTTTAACAGTATCAATAAAGACACAGTCAAAC TCGCCGATGGGTTTCATGCCATTAGCAATGGGGCGCTCGATGATATTTGGCCGAAAATGGCGAAGGGACAGCAAGCGCTA GAAGCCGTGATCAATCAGTCCGACAACCTAGAAGTGCAAGCGCTGTTACAGCTGATGAAAGACGACTCCCAACCACAAGA TAATGAATTACCTAACACGGGAGTGGGGATCGAGTGGGAACGGCGCTTAGCCGCGATTTATATTCGTCACCCCGACTATG GCACGCGCTCCACCAGCATTCTGCTTGAAGATGCTGAGGGCGGCATGCATTTCACCGAAGTGAGATACGACGGCAAAGGT AGACAGCTCGGACAGCAGGATTTCCATTTAACCCTGCCCGCCGAGCCACCCGCTAAGCCAGACTGTTTATTAACGCAAAT CTAA
Upstream 100 bases:
>100_bases CACGATAAAGCAAAAGCAAATAAGCACTCGCACCACTAACACTGTTCATTTATGAGCAGACAGGCTAAGTTAATCTACCT TTGGATTAATTTAGCCTGCT
Downstream 100 bases:
>100_bases ACTGAGCAACTGTGCAGCCTTGTATTAAAACGGCGCACTTTAGTCAGCGCTGTTGTTCAATTAAAGCAGTGGCTTAGTCC GAACTGTGATCCATAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQGQVAAVTNLRVPQKKPEAMR SRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLIFGQGTDLYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQAL EAVINQSDNLEVQALLQLMKDDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG RQLGQQDFHLTLPAEPPAKPDCLLTQI
Sequences:
>Translated_267_residues MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQGQVAAVTNLRVPQKKPEAMR SRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLIFGQGTDLYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQAL EAVINQSDNLEVQALLQLMKDDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG RQLGQQDFHLTLPAEPPAKPDCLLTQI >Mature_267_residues MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQGQVAAVTNLRVPQKKPEAMR SRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLIFGQGTDLYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQAL EAVINQSDNLEVQALLQLMKDDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG RQLGQQDFHLTLPAEPPAKPDCLLTQI
Specific function: Unknown
COG id: COG3332
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190570176, Length=255, Percent_Identity=34.1176470588235, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17566294, Length=262, Percent_Identity=27.4809160305344, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17563216, Length=262, Percent_Identity=28.6259541984733, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321566, Length=281, Percent_Identity=27.4021352313167, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29798; Mature: 29798
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQ CEEEEEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCC GQVAAVTNLRVPQKKPEAMRSRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLIFGQGTD CCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCEECCCCEEECCCCCCCEEEEEECCCC LYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQALEAVINQSDNLEVQALLQLMK EEEECCCCCCEEEECCCHHHHCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHH DDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG CCCCCCCCCCCCCCCCCEEECEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCC RQLGQQDFHLTLPAEPPAKPDCLLTQI CCCCCCCEEEECCCCCCCCCCEEEECC >Mature Secondary Structure MCILFVAINAHPKYPLIICANRDEFHHRPTAPAHFWPPEENILAGKDLQAGGTWFGVNKQ CEEEEEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCC GQVAAVTNLRVPQKKPEAMRSRGELITMTLNSGSLVCPNWLIEHSDNYQPFNLIFGQGTD CCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCCEECCCCEEECCCCCCCEEEEEECCCC LYCFNSINKDTVKLADGFHAISNGALDDIWPKMAKGQQALEAVINQSDNLEVQALLQLMK EEEECCCCCCEEEECCCHHHHCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHH DDSQPQDNELPNTGVGIEWERRLAAIYIRHPDYGTRSTSILLEDAEGGMHFTEVRYDGKG CCCCCCCCCCCCCCCCCEEECEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCC RQLGQQDFHLTLPAEPPAKPDCLLTQI CCCCCCCEEEECCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA