| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873133
Identifier: 160873133
GI number: 160873133
Start: 7928
End: 9154
Strand: Direct
Name: 160873133
Synonym: Sbal195_0007
Alternate gene names: NA
Gene position: 7928-9154 (Clockwise)
Preceding gene: 160873132
Following gene: 160873134
Centisome position: 0.15
GC content: 47.43
Gene sequence:
>1227_bases ATGGATCTTAATCGTCGGATTTTTATTAAAGGAGCGGTAGCGACGTCTGTGTTATCAGCTTTACCCGTTAAGTGGGTATT TGCCGATCAGCTTCCCGCAGCCGTCACTCCTCTGGATATATCAGCATTAACTTGGACTAAGGCAGAGGACTTGCCGAGTT ATTTCAAAGTATTAAACACTCATCCACTGAATGCGTTTCCGCCGGAGCATAAACTTGCTCCTGCTGTGACACCAGCAGAT GCCTCATTTATCCGCTGGAATGGCATAGTGCCTGATTTTAAGGCGCTGGATGCTAAGACTTGGACTTTTAAAGTGGATGG CGAGTCCGTTGCTACCCCGAAAACCTACACAATCGATGAGCTAAAGCGCCGCTTTAAGCATTACACATTACAGTTACTGA TTGAATGTGGTGGCAATAGCCGTTCAGGCTTCTTTCCTAGCACTAAAGGCAATCAATGGAATAATGCTGGGGTATTTTGC TCCGAGTGGACGGGTGTCTTGGTGAGCGACGTGCTTAAGGATTGCGGTATTAAAGCCGATGCTATTTACACGGGTCATCA CGGTGTTGATCGGCATTTGAGCGGTAAAGGTGAGGCGATTTCACGCGGTGTGCCAATAAAGGCGGCGCTCGAAGAGCTTG GACTCATTGCATGGTCGATGAACGGTGAGGACATTCCTTATCTACATGGATATCCCTTGCGTATTGTTTTTGGTGGCCGG CCGGGATCCGTTTCGCAAAAAGCCGCGACGGGGATCAGTGTGCGCAATAAAGTGCATGATGGACATAAAATGGAAGCGCC AGCATATCAACTCCCTAAGTATCCGATAGCGCCAGGTGAGGCCGTTGACAATAAAGACTACCGAATCATTGAAGAAATGA TAGTGAAGTCCTTGATTACCGGGCCTCAATCCGGAACCGAATTAGCTGTGGGTCAAAAGATGGTTATCGCAGGCCATGCT TGGGCGGGATTGCGGGAAGTCGTTAAAGTGGAAGTGAGTTATGACTATGGAACCCGCTGGTTTACCACTGAGTTAGAAAA ACCTAAAAACGTAGCGGCATGGCAGCAGTGGAAGATTGAATTGCAATTACCGTTGCAGGGATATTATGAAATCTGGGCAA AAGCGACTGACAGTGAAGGTGATAGTCAGCCTGTCGTACAACCGCAATGGAATCCTAAGGGATATATGTTTAATGGTTGC CATCGTATTGTCGTTAGAGTGGTGTAA
Upstream 100 bases:
>100_bases AATCGCCAAGATCCCACTATGACTAAAGTCGCCCAATTGTTGAGCGAGGCTGATATGCAGCAGATGGCGGATTACTTTTA CCTCGGAAAGGACAAATAAC
Downstream 100 bases:
>100_bases TGAGAGTACTGAACAAGCTATTTATTTTTCTTGGGCTAGTGGCATCCAGTATTTCGCTAGCCGCTGAGTATCCAGTGGAC CCTAAATCGGGTTTGATCAT
Product: molybdopterin-binding oxidoreductase
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Oxidoreductase; Sulfite Dehydrogenase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Sulfite Dehydrogenase Subunit Sora Apoprotein; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Mo-Co Oxidoreductase Dimerisation Domain; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; Membrane-Bound Oxidoreductase; LigA Protein; Sulfite Reductase; Sulfite Oxidase Or ; Oxidase; Sulfite Oxidase Molybdopterin Subunit; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MDLNRRIFIKGAVATSVLSALPVKWVFADQLPAAVTPLDISALTWTKAEDLPSYFKVLNTHPLNAFPPEHKLAPAVTPAD ASFIRWNGIVPDFKALDAKTWTFKVDGESVATPKTYTIDELKRRFKHYTLQLLIECGGNSRSGFFPSTKGNQWNNAGVFC SEWTGVLVSDVLKDCGIKADAIYTGHHGVDRHLSGKGEAISRGVPIKAALEELGLIAWSMNGEDIPYLHGYPLRIVFGGR PGSVSQKAATGISVRNKVHDGHKMEAPAYQLPKYPIAPGEAVDNKDYRIIEEMIVKSLITGPQSGTELAVGQKMVIAGHA WAGLREVVKVEVSYDYGTRWFTTELEKPKNVAAWQQWKIELQLPLQGYYEIWAKATDSEGDSQPVVQPQWNPKGYMFNGC HRIVVRVV
Sequences:
>Translated_408_residues MDLNRRIFIKGAVATSVLSALPVKWVFADQLPAAVTPLDISALTWTKAEDLPSYFKVLNTHPLNAFPPEHKLAPAVTPAD ASFIRWNGIVPDFKALDAKTWTFKVDGESVATPKTYTIDELKRRFKHYTLQLLIECGGNSRSGFFPSTKGNQWNNAGVFC SEWTGVLVSDVLKDCGIKADAIYTGHHGVDRHLSGKGEAISRGVPIKAALEELGLIAWSMNGEDIPYLHGYPLRIVFGGR PGSVSQKAATGISVRNKVHDGHKMEAPAYQLPKYPIAPGEAVDNKDYRIIEEMIVKSLITGPQSGTELAVGQKMVIAGHA WAGLREVVKVEVSYDYGTRWFTTELEKPKNVAAWQQWKIELQLPLQGYYEIWAKATDSEGDSQPVVQPQWNPKGYMFNGC HRIVVRVV >Mature_408_residues MDLNRRIFIKGAVATSVLSALPVKWVFADQLPAAVTPLDISALTWTKAEDLPSYFKVLNTHPLNAFPPEHKLAPAVTPAD ASFIRWNGIVPDFKALDAKTWTFKVDGESVATPKTYTIDELKRRFKHYTLQLLIECGGNSRSGFFPSTKGNQWNNAGVFC SEWTGVLVSDVLKDCGIKADAIYTGHHGVDRHLSGKGEAISRGVPIKAALEELGLIAWSMNGEDIPYLHGYPLRIVFGGR PGSVSQKAATGISVRNKVHDGHKMEAPAYQLPKYPIAPGEAVDNKDYRIIEEMIVKSLITGPQSGTELAVGQKMVIAGHA WAGLREVVKVEVSYDYGTRWFTTELEKPKNVAAWQQWKIELQLPLQGYYEIWAKATDSEGDSQPVVQPQWNPKGYMFNGC HRIVVRVV
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=371, Percent_Identity=30.188679245283, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI74099702, Length=371, Percent_Identity=30.188679245283, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI74099694, Length=371, Percent_Identity=30.188679245283, Blast_Score=120, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71992535, Length=366, Percent_Identity=30.6010928961749, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI18859905, Length=387, Percent_Identity=28.9405684754522, Blast_Score=132, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45170; Mature: 45170
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLNRRIFIKGAVATSVLSALPVKWVFADQLPAAVTPLDISALTWTKAEDLPSYFKVLNT CCCCCEEEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHC HPLNAFPPEHKLAPAVTPADASFIRWNGIVPDFKALDAKTWTFKVDGESVATPKTYTIDE CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCCEEEEEEECCCCCCCCCEEEHHH LKRRFKHYTLQLLIECGGNSRSGFFPSTKGNQWNNAGVFCSEWTGVLVSDVLKDCGIKAD HHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEE AIYTGHHGVDRHLSGKGEAISRGVPIKAALEELGLIAWSMNGEDIPYLHGYPLRIVFGGR EEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHCCEEEEECCCCCCCEECCCCEEEEECCC PGSVSQKAATGISVRNKVHDGHKMEAPAYQLPKYPIAPGEAVDNKDYRIIEEMIVKSLIT CCCCCHHHHCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GPQSGTELAVGQKMVIAGHAWAGLREVVKVEVSYDYGTRWFTTELEKPKNVAAWQQWKIE CCCCCCEEECCCEEEEECCCHHHHHEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEE LQLPLQGYYEIWAKATDSEGDSQPVVQPQWNPKGYMFNGCHRIVVRVV EECCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEC >Mature Secondary Structure MDLNRRIFIKGAVATSVLSALPVKWVFADQLPAAVTPLDISALTWTKAEDLPSYFKVLNT CCCCCEEEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHC HPLNAFPPEHKLAPAVTPADASFIRWNGIVPDFKALDAKTWTFKVDGESVATPKTYTIDE CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCCEEEEEEECCCCCCCCCEEEHHH LKRRFKHYTLQLLIECGGNSRSGFFPSTKGNQWNNAGVFCSEWTGVLVSDVLKDCGIKAD HHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEE AIYTGHHGVDRHLSGKGEAISRGVPIKAALEELGLIAWSMNGEDIPYLHGYPLRIVFGGR EEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHCCEEEEECCCCCCCEECCCCEEEEECCC PGSVSQKAATGISVRNKVHDGHKMEAPAYQLPKYPIAPGEAVDNKDYRIIEEMIVKSLIT CCCCCHHHHCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GPQSGTELAVGQKMVIAGHAWAGLREVVKVEVSYDYGTRWFTTELEKPKNVAAWQQWKIE CCCCCCEEECCCEEEEECCCHHHHHEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEE LQLPLQGYYEIWAKATDSEGDSQPVVQPQWNPKGYMFNGCHRIVVRVV EECCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA