| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873132
Identifier: 160873132
GI number: 160873132
Start: 7624
End: 7926
Strand: Direct
Name: 160873132
Synonym: Sbal195_0006
Alternate gene names: NA
Gene position: 7624-7926 (Clockwise)
Preceding gene: 160873130
Following gene: 160873133
Centisome position: 0.14
GC content: 46.53
Gene sequence:
>303_bases ATGTGGCTGCGAGTGATCTATCCGGCGAGCGTGCTGATATTAATGTTACCAGCTGTGGTAAACGCCGATGAAGCTAATAA GTTATTGAACATGTGTAAGGCCTGCCATGGCGAGTCTGGCATGAGTCGTTTTGAGCATATTCCTAACATTGGATGCCAAA ACTCGGATTACCTGTTGAAGCAGCTTCGAGCCTTTAAGACGGGAAATCGCCAAGATCCCACTATGACTAAAGTCGCCCAA TTGTTGAGCGAGGCTGATATGCAGCAGATGGCGGATTACTTTTACCTCGGAAAGGACAAATAA
Upstream 100 bases:
>100_bases GAATTTAAACCACTCACCGCATTGGGATAATTTAAGCATGTCTTAATTTCTTCGTTCGATGGAACTCGTCGGGATGAAGA CTAACTGATGAGAACAGTGG
Downstream 100 bases:
>100_bases CATGGATCTTAATCGTCGGATTTTTATTAAAGGAGCGGTAGCGACGTCTGTGTTATCAGCTTTACCCGTTAAGTGGGTAT TTGCCGATCAGCTTCCCGCA
Product: monoheme cytochrome c
Products: NA
Alternate protein names: Monoheme Cytochrome C; Class I Cytochrome C; Cytochrome C
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MWLRVIYPASVLILMLPAVVNADEANKLLNMCKACHGESGMSRFEHIPNIGCQNSDYLLKQLRAFKTGNRQDPTMTKVAQ LLSEADMQQMADYFYLGKDK
Sequences:
>Translated_100_residues MWLRVIYPASVLILMLPAVVNADEANKLLNMCKACHGESGMSRFEHIPNIGCQNSDYLLKQLRAFKTGNRQDPTMTKVAQ LLSEADMQQMADYFYLGKDK >Mature_100_residues MWLRVIYPASVLILMLPAVVNADEANKLLNMCKACHGESGMSRFEHIPNIGCQNSDYLLKQLRAFKTGNRQDPTMTKVAQ LLSEADMQQMADYFYLGKDK
Specific function: Unknown
COG id: COG2863
COG function: function code C; Cytochrome c553
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11341; Mature: 11341
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLRVIYPASVLILMLPAVVNADEANKLLNMCKACHGESGMSRFEHIPNIGCQNSDYLLK CCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHH QLRAFKTGNRQDPTMTKVAQLLSEADMQQMADYFYLGKDK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MWLRVIYPASVLILMLPAVVNADEANKLLNMCKACHGESGMSRFEHIPNIGCQNSDYLLK CCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHH QLRAFKTGNRQDPTMTKVAQLLSEADMQQMADYFYLGKDK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA