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The map label for this gene is yybK

Identifier: 16081113

GI number: 16081113

Start: 4175117

End: 4175872

Strand: Direct

Name: yybK

Synonym: BSU40610

Alternate gene names: 16081113

Gene position: 4175117-4175872 (Clockwise)

Preceding gene: 16081112

Following gene: 16081114

Centisome position: 99.04

GC content: 26.85

Gene sequence:

>756_bases
ATGAGGATTAAAGGCTTTTTCATAACTTTAGTTGCGATAATATTTCAGGCGTCATTATCGAGTTATAATAATAATAAAAA
TGTCTTTCCTTTTTTAGATGGCATACCAATAAGCACCTCGGGTCATTATGAGTATCAAAATATTTTATTGTGGTTTGTAC
CTATTGTTTCCCTAAGTTTTTGTTTCTCTGGGAGTATTAGAGATACATACATTTCGTATGAGCAATTAAAGTTAGTAAGA
GAACATAGTAGAGTTAAATGGGTAACATCTCAATTCTTAATAATTACAGTTGTACTTTTAATCTTTACTTTATCTCAGAT
TGCTATATTTTATATTTATTCACTTGTATCTCTTCATAACCTTGATATTAATTCCGTTATCAATAAAAGATTTGTTATGA
TGACACTCATGTATTATCTAACCTTACTTAACTTATTTAGTTTTCAATTATTTATGGAGCTTTATTATAAATCTCAAATA
GCACAATTAAATATAAGCGTTTATATTATTTTTTCGTTAATTTTAGCAAAGAAGTTAGTGCAATTAAATTCTCCGAAAGT
TATTCACTACTTTTTAATTCCAAACTACAGTAATGGATTAAGAACTGGGTTAAGCTATTATTCCCAATCTGGAACTGCTA
TTATTGAACCATTATTAGGTTTGTTTATTATAATCATTTTACAGATTTCAATAGTTATATTATCTGTCTTAAAGTTCAAA
AAAATAGATATGCTAAAAAGTGAGGGCTTACAATGA

Upstream 100 bases:

>100_bases
CAACTTCAAATCTTATAATAGTTTATATTAGACAGATAATAATAGTTTTTATTTTTTATTTAGTTGGATCTTCAATTTTT
TTGAATAAGGATTATAAAAA

Downstream 100 bases:

>100_bases
TTGAGGTATTAAACCTAACAAAAAAAATTAAAAAGACTACAGTTTTAGATAATATCTCTTATACATTTGAAAAAGGAACA
ATTTATGGACTATTTGGGAG

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRIKGFFITLVAIIFQASLSSYNNNKNVFPFLDGIPISTSGHYEYQNILLWFVPIVSLSFCFSGSIRDTYISYEQLKLVR
EHSRVKWVTSQFLIITVVLLIFTLSQIAIFYIYSLVSLHNLDINSVINKRFVMMTLMYYLTLLNLFSFQLFMELYYKSQI
AQLNISVYIIFSLILAKKLVQLNSPKVIHYFLIPNYSNGLRTGLSYYSQSGTAIIEPLLGLFIIIILQISIVILSVLKFK
KIDMLKSEGLQ

Sequences:

>Translated_251_residues
MRIKGFFITLVAIIFQASLSSYNNNKNVFPFLDGIPISTSGHYEYQNILLWFVPIVSLSFCFSGSIRDTYISYEQLKLVR
EHSRVKWVTSQFLIITVVLLIFTLSQIAIFYIYSLVSLHNLDINSVINKRFVMMTLMYYLTLLNLFSFQLFMELYYKSQI
AQLNISVYIIFSLILAKKLVQLNSPKVIHYFLIPNYSNGLRTGLSYYSQSGTAIIEPLLGLFIIIILQISIVILSVLKFK
KIDMLKSEGLQ
>Mature_251_residues
MRIKGFFITLVAIIFQASLSSYNNNKNVFPFLDGIPISTSGHYEYQNILLWFVPIVSLSFCFSGSIRDTYISYEQLKLVR
EHSRVKWVTSQFLIITVVLLIFTLSQIAIFYIYSLVSLHNLDINSVINKRFVMMTLMYYLTLLNLFSFQLFMELYYKSQI
AQLNISVYIIFSLILAKKLVQLNSPKVIHYFLIPNYSNGLRTGLSYYSQSGTAIIEPLLGLFIIIILQISIVILSVLKFK
KIDMLKSEGLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYBK_BACSU (P37493)

Other databases:

- EMBL:   M77837
- EMBL:   D26185
- EMBL:   AL009126
- PIR:   E41666
- RefSeq:   NP_391941.1
- ProteinModelPortal:   P37493
- EnsemblBacteria:   EBBACT00000002747
- GeneID:   938116
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40610
- NMPDR:   fig|224308.1.peg.4067
- GenoList:   BSU40610
- OMA:   ISTSGHY
- ProtClustDB:   CLSK226576
- BioCyc:   BSUB:BSU40610-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29014; Mature: 29014

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCC
>Mature Secondary Structure
MRIKGFFITLVAIIFQASLSSYNNNKNVFPFLDGIPISTSGHYEYQNILLWFVPIVSLSF
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
CFSGSIRDTYISYEQLKLVREHSRVKWVTSQFLIITVVLLIFTLSQIAIFYIYSLVSLHN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LDINSVINKRFVMMTLMYYLTLLNLFSFQLFMELYYKSQIAQLNISVYIIFSLILAKKLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLNSPKVIHYFLIPNYSNGLRTGLSYYSQSGTAIIEPLLGLFIIIILQISIVILSVLKFK
HCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIDMLKSEGLQ
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938973; 7584024; 9384377