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The map label for this gene is iolH

Identifier: 16081020

GI number: 16081020

Start: 4074896

End: 4075765

Strand: Reverse

Name: iolH

Synonym: BSU39690

Alternate gene names: 16081020

Gene position: 4075765-4074896 (Counterclockwise)

Preceding gene: 255767850

Following gene: 16081019

Centisome position: 96.68

GC content: 43.79

Gene sequence:

>870_bases
ATGAAGTTAGCATTGGATCCATCCATGTATCGTGATGATTTAACTTTAGAGGAAATGGTCTATAAAACGGCAGAGCTCGG
CTATGAATATATCGAATTATCGCCGCGCGAGGATTTTTGCCCGTTTTATAAATATCCGAAAGTCGATTCAGCAAAGATCA
AACAATTAAAGCGCCTTTTAAGAGATACAGGTGTTAAGCTTTCATCGCTTCTTCCTCTTTACCACTGGGCGGGACCCGAT
GAAGACCGCCGCCAGGCAGCAGTGCGCAACTGGAAACGGGCAATCGAAATTGCGGTTGAACTTGAAGTGGATTTGATGAA
CAGCGAATTCAGCGGTTCAAAATATGATCCTTTAACAAGTGAAGAAAAATTTATCAAATCCATGGATGAGCTTCTGCCAG
TCTTTGAAAAAGAAGGCATTAAACTCAATCTTCAAGCCCATCCATATGATTTTATCGAAACGCACAAAGGTGCGATGGAT
ATGATCCGCGCGCTTGACAAGGATTGGATCAATCTTGTCTACTCGACTGCGCATACGTTCTTCTATGATGACGGCAAAGG
CGACATCGAGACCATGTTTGACGAAGCCGGCGACCGCCTCACACATGTTTTATTTGCAGATACCTATAATCATAAAGCGG
CTCATGGCCTTCGCTACATCGTCAATCCGCCTGACGCGAAAGTAACGGTTCACCAGCATTTGGACATTGGCCAAGGCGAG
GTTGATTTTGATACGATTTTCAGAAAACTGAGAGAGATGAAGTTCGACGGAATTGCGACGAATGCCGTATTTGCTTGGGT
CGATGAAAGAGCGGATGAATCAAGCCGATTTATGCTTAAGAAAATGAAAGAAGAATTAGGTCTGGCATAA

Upstream 100 bases:

>100_bases
CAGGAATCTGGACAAAAAGAAAAGGTTGAATTGAAGGAAAAACCGGAATTCTATCAATCTTTTACAACAGTTCAAAACTA
AAAAACAGAGGAGTGAAAAT

Downstream 100 bases:

>100_bases
GCTGAGCATGGAGTTCGGCGGGATATGGCGACAGCCTTCCTGCCGAACTCCCTTCATATCTAAAACGCAGATGGGGGAGT
CTGGCATGAAACTTTGTTTT

Product: sugar-phosphate epimerase/isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKLALDPSMYRDDLTLEEMVYKTAELGYEYIELSPREDFCPFYKYPKVDSAKIKQLKRLLRDTGVKLSSLLPLYHWAGPD
EDRRQAAVRNWKRAIEIAVELEVDLMNSEFSGSKYDPLTSEEKFIKSMDELLPVFEKEGIKLNLQAHPYDFIETHKGAMD
MIRALDKDWINLVYSTAHTFFYDDGKGDIETMFDEAGDRLTHVLFADTYNHKAAHGLRYIVNPPDAKVTVHQHLDIGQGE
VDFDTIFRKLREMKFDGIATNAVFAWVDERADESSRFMLKKMKEELGLA

Sequences:

>Translated_289_residues
MKLALDPSMYRDDLTLEEMVYKTAELGYEYIELSPREDFCPFYKYPKVDSAKIKQLKRLLRDTGVKLSSLLPLYHWAGPD
EDRRQAAVRNWKRAIEIAVELEVDLMNSEFSGSKYDPLTSEEKFIKSMDELLPVFEKEGIKLNLQAHPYDFIETHKGAMD
MIRALDKDWINLVYSTAHTFFYDDGKGDIETMFDEAGDRLTHVLFADTYNHKAAHGLRYIVNPPDAKVTVHQHLDIGQGE
VDFDTIFRKLREMKFDGIATNAVFAWVDERADESSRFMLKKMKEELGLA
>Mature_289_residues
MKLALDPSMYRDDLTLEEMVYKTAELGYEYIELSPREDFCPFYKYPKVDSAKIKQLKRLLRDTGVKLSSLLPLYHWAGPD
EDRRQAAVRNWKRAIEIAVELEVDLMNSEFSGSKYDPLTSEEKFIKSMDELLPVFEKEGIKLNLQAHPYDFIETHKGAMD
MIRALDKDWINLVYSTAHTFFYDDGKGDIETMFDEAGDRLTHVLFADTYNHKAAHGLRYIVNPPDAKVTVHQHLDIGQGE
VDFDTIFRKLREMKFDGIATNAVFAWVDERADESSRFMLKKMKEELGLA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IOLH_BACSU (P42418)

Other databases:

- EMBL:   D14399
- EMBL:   AL009126
- EMBL:   M76431
- PIR:   H69645
- RefSeq:   NP_391848.1
- ProteinModelPortal:   P42418
- EnsemblBacteria:   EBBACT00000003497
- GeneID:   937613
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39690
- NMPDR:   fig|224308.1.peg.3974
- GenoList:   BSU39690
- GeneTree:   EBGT00050000002073
- HOGENOM:   HBG294335
- OMA:   VFAWEER
- ProtClustDB:   CLSK2752572
- BioCyc:   BSUB:BSU39690-MONOMER
- InterPro:   IPR013022
- InterPro:   IPR012307
- Gene3D:   G3DSA:3.20.20.150

Pfam domain/function: PF01261 AP_endonuc_2; SSF51658 Xyl_isomerase-like_TIM-brl

EC number: NA

Molecular weight: Translated: 33525; Mature: 33525

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLALDPSMYRDDLTLEEMVYKTAELGYEYIELSPREDFCPFYKYPKVDSAKIKQLKRLL
CCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
RDTGVKLSSLLPLYHWAGPDEDRRQAAVRNWKRAIEIAVELEVDLMNSEFSGSKYDPLTS
HHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCC
EEKFIKSMDELLPVFEKEGIKLNLQAHPYDFIETHKGAMDMIRALDKDWINLVYSTAHTF
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHE
FYDDGKGDIETMFDEAGDRLTHVLFADTYNHKAAHGLRYIVNPPDAKVTVHQHLDIGQGE
EEECCCCHHHHHHHHHCCHHEEEEEECCCCCHHHCCCEEEECCCCCEEEEEECCCCCCCC
VDFDTIFRKLREMKFDGIATNAVFAWVDERADESSRFMLKKMKEELGLA
CCHHHHHHHHHHHCCCCEEHHHHHEEHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLALDPSMYRDDLTLEEMVYKTAELGYEYIELSPREDFCPFYKYPKVDSAKIKQLKRLL
CCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
RDTGVKLSSLLPLYHWAGPDEDRRQAAVRNWKRAIEIAVELEVDLMNSEFSGSKYDPLTS
HHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCCCC
EEKFIKSMDELLPVFEKEGIKLNLQAHPYDFIETHKGAMDMIRALDKDWINLVYSTAHTF
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHE
FYDDGKGDIETMFDEAGDRLTHVLFADTYNHKAAHGLRYIVNPPDAKVTVHQHLDIGQGE
EEECCCCHHHHHHHHHCCHHEEEEEECCCCCHHHCCCEEEECCCCCEEEEEECCCCCCCC
VDFDTIFRKLREMKFDGIATNAVFAWVDERADESSRFMLKKMKEELGLA
CCHHHHHHHHHHHCCCCEEHHHHHEEHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7952181; 9384377; 1761221