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The map label for this gene is yxiO

Identifier: 16080961

GI number: 16080961

Start: 4014682

End: 4015968

Strand: Direct

Name: yxiO

Synonym: BSU39100

Alternate gene names: 16080961

Gene position: 4014682-4015968 (Clockwise)

Preceding gene: 255767826

Following gene: 16080985

Centisome position: 95.23

GC content: 48.1

Gene sequence:

>1287_bases
ATGATGAAACGTTTTACGAAACAAGAAAACAGCTGGGTGTTATATGACTGGGCAAATTCAGCTTACTCAATTGTCGTGAC
CACCGCGGTATTTCCGTTATTTTATAAATCAGCAGCTGCGGAAAGCGGTGTCAGCGCCGCTCAATCGACTGCCTATCTGG
GCTATACCATTGCGATTTCAACGTTTATTCTTGCGATGCTCGGCCCTATTTTAGGCACAATCGCCGACTATGAAGGGTGC
AAGAAAAAGTTCTTCGGTTTCTTTGTGTCAGCCGGTGTCGCCAGCACCGCGATGCTCGCCTTTATCCCTAGTGAACATTG
GCTGCTATTGTTGCTGTTTTATACGGTATCGGCTATCGGTTTTTCCGGCGCCAATGTGTTTTATGATGCCTTTCTCGTGG
ACGTCACGCCTGAGAAGCGGATGAATCTCGTCTCGGCACGGGGTTTTGGCTTAGGATACATTGGAAGCACGATTCCATTT
ATCATCAGTATTGCTGTCATCCTGCTCGCACAAGCAGAGACTATTCCAGTGTCTGTATCGGCCGCAAGCCAGCTGTCCTT
CTTCATAACGGCTGCCTGGTGGGGGCTGTTCACCATCCCAATGATTAAACATGTCCATCAACGCTATTACATCAAAAAAG
AACCTCATATTGTCATCAACAGCTTTAAGCGGCTCGGCCAAACGATGAAACGGATCAGGCAATACCGGGCACTTTTCCTC
TTCTTGCTCGCTTATTTCTTTTATATCGACGGAGTCGGCACGATTATTACGATGTCGACATCCTATGGATCAGATTTAGG
GATCGGCTCCTCAAGCCTTCTGATCATCCTATTTGTCACCCAGGTAGTCGCCGCGCCGTTTTCGATTATATACGGAAAAC
TGGCAGAACGCTTCACGGGGAAGACCATGCTGTACGTCGGGATCGTCATTTATATGATCGTCTGCGTGTATGCCTATTTT
ATGGAGACAACGCTTGATTTCTGGATACTGGCTATGCTTGTCGCCACCTCGCAAGGCGGTATTCAAGCCCTAAGCCGTTC
CTATTTCGCCAAGCTTGTGCCAAAGCGCCACGCCAATGAATTCTTTGGCTTCTACAACATTTTTGGAAAATTCGCCTCAA
TTATGGGGCCGCTGCTCATTGCCGTTACCGCCCAGCTGACCGGTAAATCCTCGACTGCGGTGTTCAGCCTGATCATTTTG
TTTGTGATTGGTATTGTGATTCTTGCCTTTGTTCCCGAGGAAACCAGCACAGATGTCAGCCAGCAGCAAAATGACCTGCC
CCTTTAA

Upstream 100 bases:

>100_bases
GCGAAAAAACATAAATATTTTGTAAAAATTGACGTGCATTCCATTCTTTTCAGGCCCATTTCTCGTACAATAGAAGTATC
GTTACCGGAGAGGGGCTCTG

Downstream 100 bases:

>100_bases
CTGGGAGCAGGTCATTCATCATTTATTCGCTTTATTCACCTTCAGCTGTTTCCCTTTGACGGTTGTGTTCTTCATCACTT
TGAGAACATGAGGGCCTTTA

Product: efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MMKRFTKQENSWVLYDWANSAYSIVVTTAVFPLFYKSAAAESGVSAAQSTAYLGYTIAISTFILAMLGPILGTIADYEGC
KKKFFGFFVSAGVASTAMLAFIPSEHWLLLLLFYTVSAIGFSGANVFYDAFLVDVTPEKRMNLVSARGFGLGYIGSTIPF
IISIAVILLAQAETIPVSVSAASQLSFFITAAWWGLFTIPMIKHVHQRYYIKKEPHIVINSFKRLGQTMKRIRQYRALFL
FLLAYFFYIDGVGTIITMSTSYGSDLGIGSSSLLIILFVTQVVAAPFSIIYGKLAERFTGKTMLYVGIVIYMIVCVYAYF
METTLDFWILAMLVATSQGGIQALSRSYFAKLVPKRHANEFFGFYNIFGKFASIMGPLLIAVTAQLTGKSSTAVFSLIIL
FVIGIVILAFVPEETSTDVSQQQNDLPL

Sequences:

>Translated_428_residues
MMKRFTKQENSWVLYDWANSAYSIVVTTAVFPLFYKSAAAESGVSAAQSTAYLGYTIAISTFILAMLGPILGTIADYEGC
KKKFFGFFVSAGVASTAMLAFIPSEHWLLLLLFYTVSAIGFSGANVFYDAFLVDVTPEKRMNLVSARGFGLGYIGSTIPF
IISIAVILLAQAETIPVSVSAASQLSFFITAAWWGLFTIPMIKHVHQRYYIKKEPHIVINSFKRLGQTMKRIRQYRALFL
FLLAYFFYIDGVGTIITMSTSYGSDLGIGSSSLLIILFVTQVVAAPFSIIYGKLAERFTGKTMLYVGIVIYMIVCVYAYF
METTLDFWILAMLVATSQGGIQALSRSYFAKLVPKRHANEFFGFYNIFGKFASIMGPLLIAVTAQLTGKSSTAVFSLIIL
FVIGIVILAFVPEETSTDVSQQQNDLPL
>Mature_428_residues
MMKRFTKQENSWVLYDWANSAYSIVVTTAVFPLFYKSAAAESGVSAAQSTAYLGYTIAISTFILAMLGPILGTIADYEGC
KKKFFGFFVSAGVASTAMLAFIPSEHWLLLLLFYTVSAIGFSGANVFYDAFLVDVTPEKRMNLVSARGFGLGYIGSTIPF
IISIAVILLAQAETIPVSVSAASQLSFFITAAWWGLFTIPMIKHVHQRYYIKKEPHIVINSFKRLGQTMKRIRQYRALFL
FLLAYFFYIDGVGTIITMSTSYGSDLGIGSSSLLIILFVTQVVAAPFSIIYGKLAERFTGKTMLYVGIVIYMIVCVYAYF
METTLDFWILAMLVATSQGGIQALSRSYFAKLVPKRHANEFFGFYNIFGKFASIMGPLLIAVTAQLTGKSSTAVFSLIIL
FVIGIVILAFVPEETSTDVSQQQNDLPL

Specific function: Unknown

COG id: COG2270

COG function: function code R; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXIO_BACSU (P42306)

Other databases:

- EMBL:   D83026
- EMBL:   AL009126
- PIR:   B70078
- RefSeq:   NP_391789.1
- ProteinModelPortal:   P42306
- EnsemblBacteria:   EBBACT00000001590
- GeneID:   937480
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39100
- NMPDR:   fig|224308.1.peg.3915
- GenoList:   BSU39100
- GeneTree:   EBGT00050000000130
- HOGENOM:   HBG544974
- OMA:   FGPVQAS
- ProtClustDB:   CLSK2752565
- BioCyc:   BSUB:BSU39100-MONOMER
- GO:   GO:0006810
- InterPro:   IPR020846
- InterPro:   IPR016196

Pfam domain/function: SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 47273; Mature: 47273

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x131412f0)-; HASH(0x13536b08)-; HASH(0x13536bd4)-; HASH(0x138b65d8)-; HASH(0x132622a0)-; HASH(0x133edc80)-; HASH(0x12d48c54)-; HASH(0x1355f1cc)-; HASH(0x1045ae5c)-; HASH(0x1289c87c)-; HASH(0x11589984)-; HASH(0x12ecc1a8)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRFTKQENSWVLYDWANSAYSIVVTTAVFPLFYKSAAAESGVSAAQSTAYLGYTIAIS
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TFILAMLGPILGTIADYEGCKKKFFGFFVSAGVASTAMLAFIPSEHWLLLLLFYTVSAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
FSGANVFYDAFLVDVTPEKRMNLVSARGFGLGYIGSTIPFIISIAVILLAQAETIPVSVS
CCCCHHEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
AASQLSFFITAAWWGLFTIPMIKHVHQRYYIKKEPHIVINSFKRLGQTMKRIRQYRALFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FLLAYFFYIDGVGTIITMSTSYGSDLGIGSSSLLIILFVTQVVAAPFSIIYGKLAERFTG
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KTMLYVGIVIYMIVCVYAYFMETTLDFWILAMLVATSQGGIQALSRSYFAKLVPKRHANE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHH
FFGFYNIFGKFASIMGPLLIAVTAQLTGKSSTAVFSLIILFVIGIVILAFVPEETSTDVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
QQQNDLPL
HCCCCCCH
>Mature Secondary Structure
MMKRFTKQENSWVLYDWANSAYSIVVTTAVFPLFYKSAAAESGVSAAQSTAYLGYTIAIS
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TFILAMLGPILGTIADYEGCKKKFFGFFVSAGVASTAMLAFIPSEHWLLLLLFYTVSAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
FSGANVFYDAFLVDVTPEKRMNLVSARGFGLGYIGSTIPFIISIAVILLAQAETIPVSVS
CCCCHHEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
AASQLSFFITAAWWGLFTIPMIKHVHQRYYIKKEPHIVINSFKRLGQTMKRIRQYRALFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FLLAYFFYIDGVGTIITMSTSYGSDLGIGSSSLLIILFVTQVVAAPFSIIYGKLAERFTG
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KTMLYVGIVIYMIVCVYAYFMETTLDFWILAMLVATSQGGIQALSRSYFAKLVPKRHANE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHH
FFGFYNIFGKFASIMGPLLIAVTAQLTGKSSTAVFSLIILFVIGIVILAFVPEETSTDVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
QQQNDLPL
HCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377