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The map label for this gene is yxkC

Identifier: 16080936

GI number: 16080936

Start: 3989232

End: 3989873

Strand: Direct

Name: yxkC

Synonym: BSU38850

Alternate gene names: 16080936

Gene position: 3989232-3989873 (Clockwise)

Preceding gene: 16080934

Following gene: 16080939

Centisome position: 94.63

GC content: 35.51

Gene sequence:

>642_bases
ATGGCAGGAAAACTAGTACCCTGTAAAGCTTGCGGTCAAGAAATTGCAAAGGGTGTAAAAAAATGTCCTAACTGCGGTAA
GGATCAACGTAACTTTTTTATGCGACATAAAATCATTACGTTTATTCTCGCAGTTGTTGTCATCATTATTATCGGTAATA
TGATTGGCGGCGGAGGCGGCTCAGAAGCCACTTCCAAAACATCAAGCAGCAGCAAAGCAGAAACTGAAAAAACATACAAT
ATCGGTGATACCGTAAAAACTGAAAAAACTGAAGTGACGGTTACGAAGGTAGAGGACAGAGATACTGTCGGTACTCAATA
TGTTGAAAAGAAAGCATCTGAGGGAGGTACAATTGTAGCTGTTCAATATACAATTAAAAACGTATCTAAAAAGCCGATTA
GCTCTTTTTCAATTCCAACTGTTAAATTAGTTGATGCTGATGGTACTTCTTATGATTCTGATATTGATGCTTCTGTAAAC
TATGCAACTGAGACAAAAGTTGATAACTCTAAAATTTTGAGTGATCTAAATCCTAATATTAAAGTAACAGGTGTAAAAGC
ATTTGAAGTTGACAAGGAAGCTTATGCAAAAGGCACTTGGAAACTAAAATTCAGTAATGATGTTATTGTGAAAATCAAAT
AA

Upstream 100 bases:

>100_bases
ATAATTATAAGAAATTCATAATTTTATATTGACTAAGAGAAATAATATAGGCATTATAGTACATATGTTTCGTACATTTT
ATTACATAGGAGGAAATATA

Downstream 100 bases:

>100_bases
CAGCTAACAAGGGTGCCTGTTTAGGCACCCTTGTTCTTTAAAAAAGGCCTTCTCAATTGAGAAGGCCTCCATTCTTATTC
CGCACTCTTATACCCATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MAGKLVPCKACGQEIAKGVKKCPNCGKDQRNFFMRHKIITFILAVVVIIIIGNMIGGGGGSEATSKTSSSSKAETEKTYN
IGDTVKTEKTEVTVTKVEDRDTVGTQYVEKKASEGGTIVAVQYTIKNVSKKPISSFSIPTVKLVDADGTSYDSDIDASVN
YATETKVDNSKILSDLNPNIKVTGVKAFEVDKEAYAKGTWKLKFSNDVIVKIK

Sequences:

>Translated_213_residues
MAGKLVPCKACGQEIAKGVKKCPNCGKDQRNFFMRHKIITFILAVVVIIIIGNMIGGGGGSEATSKTSSSSKAETEKTYN
IGDTVKTEKTEVTVTKVEDRDTVGTQYVEKKASEGGTIVAVQYTIKNVSKKPISSFSIPTVKLVDADGTSYDSDIDASVN
YATETKVDNSKILSDLNPNIKVTGVKAFEVDKEAYAKGTWKLKFSNDVIVKIK
>Mature_212_residues
AGKLVPCKACGQEIAKGVKKCPNCGKDQRNFFMRHKIITFILAVVVIIIIGNMIGGGGGSEATSKTSSSSKAETEKTYNI
GDTVKTEKTEVTVTKVEDRDTVGTQYVEKKASEGGTIVAVQYTIKNVSKKPISSFSIPTVKLVDADGTSYDSDIDASVNY
ATETKVDNSKILSDLNPNIKVTGVKAFEVDKEAYAKGTWKLKFSNDVIVKIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015250
- InterPro:   IPR021652 [H]

Pfam domain/function: PF11611 TRF2 [H]

EC number: NA

Molecular weight: Translated: 22957; Mature: 22825

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKLVPCKACGQEIAKGVKKCPNCGKDQRNFFMRHKIITFILAVVVIIIIGNMIGGGGG
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SEATSKTSSSSKAETEKTYNIGDTVKTEKTEVTVTKVEDRDTVGTQYVEKKASEGGTIVA
CCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEE
VQYTIKNVSKKPISSFSIPTVKLVDADGTSYDSDIDASVNYATETKVDNSKILSDLNPNI
EEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCE
KVTGVKAFEVDKEAYAKGTWKLKFSNDVIVKIK
EEEEEEEEECCHHHHCCCEEEEEECCEEEEEEC
>Mature Secondary Structure 
AGKLVPCKACGQEIAKGVKKCPNCGKDQRNFFMRHKIITFILAVVVIIIIGNMIGGGGG
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SEATSKTSSSSKAETEKTYNIGDTVKTEKTEVTVTKVEDRDTVGTQYVEKKASEGGTIVA
CCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEE
VQYTIKNVSKKPISSFSIPTVKLVDADGTSYDSDIDASVNYATETKVDNSKILSDLNPNI
EEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCE
KVTGVKAFEVDKEAYAKGTWKLKFSNDVIVKIK
EEEEEEEEECCHHHHCCCEEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 10658653 [H]