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The map label for this gene is licB

Identifier: 16080910

GI number: 16080910

Start: 3961566

End: 3961874

Strand: Reverse

Name: licB

Synonym: BSU38590

Alternate gene names: 16080910

Gene position: 3961874-3961566 (Counterclockwise)

Preceding gene: 16080911

Following gene: 16080909

Centisome position: 93.98

GC content: 45.31

Gene sequence:

>309_bases
ATGAATATATTACTCGTTTGTGCAGCAGGCATGTCTACTAGCTTACTGGTGAGCAAGATGGAAAAAAGTGCGCAGGAACA
GGGAAAAGACTATACCATTTGGGCAGTTTCAGGCGATTCTGTACAAAATCATATCGATAAAGCGGATGTATTGCTTCTCG
GTCCGCAAGTCCGTTACATGCTTCCGCAGCTCAAAAAATTAGGAGAGTCAAAGGGGGTTCCGGTAGACGTCATTAATACC
GTCCATTATGGAACGTGCAATGGGGCGGAAGTGCTGAAATCAGCTGAACAGCTTGGACATGTGTCATAG

Upstream 100 bases:

>100_bases
CTGCGGAAAAACCCTGAGTGTTTATGAAAGCGATTTCATAATATGATGATAGCAACAGCAGGACATTACAAAATTGATCA
AACTCTAGGGGGTCTTTTAC

Downstream 100 bases:

>100_bases
AGAGGGGCGGGCTATGTGAATAAAGTCAATCAGATCTTAGAAGAAAAGGTCATGCCTATAGCGGGAAGAATTGCGGGACA
GCGTCATTTGCAGGCGCTGC

Product: phosphotransferase system (PTS) lichenan-specific enzyme IIB component

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MNILLVCAAGMSTSLLVSKMEKSAQEQGKDYTIWAVSGDSVQNHIDKADVLLLGPQVRYMLPQLKKLGESKGVPVDVINT
VHYGTCNGAEVLKSAEQLGHVS

Sequences:

>Translated_102_residues
MNILLVCAAGMSTSLLVSKMEKSAQEQGKDYTIWAVSGDSVQNHIDKADVLLLGPQVRYMLPQLKKLGESKGVPVDVINT
VHYGTCNGAEVLKSAEQLGHVS
>Mature_102_residues
MNILLVCAAGMSTSLLVSKMEKSAQEQGKDYTIWAVSGDSVQNHIDKADVLLLGPQVRYMLPQLKKLGESKGVPVDVINT
VHYGTCNGAEVLKSAEQLGHVS

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain

Homologues:

Organism=Escherichia coli, GI1788034, Length=95, Percent_Identity=46.3157894736842, Blast_Score=73, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PTJB_BACSU (P46318)

Other databases:

- EMBL:   Z49992
- EMBL:   D83026
- EMBL:   AL009126
- PIR:   E69651
- RefSeq:   NP_391738.1
- ProteinModelPortal:   P46318
- SMR:   P46318
- PhosSite:   P46318
- EnsemblBacteria:   EBBACT00000000040
- GeneID:   937379
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38590
- NMPDR:   fig|224308.1.peg.3864
- GenoList:   BSU38590
- GeneTree:   EBGT00050000001261
- HOGENOM:   HBG697211
- OMA:   IPVDVIQ
- PhylomeDB:   P46318
- ProtClustDB:   CLSK888115
- BioCyc:   BSUB:BSU38590-MONOMER
- BRENDA:   2.7.1.69
- GO:   GO:0005737
- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012
- TIGRFAMs:   TIGR00853

Pfam domain/function: PF02302 PTS_IIB

EC number: =2.7.1.69

Molecular weight: Translated: 10955; Mature: 10955

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: ACT_SITE 7-7

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLVCAAGMSTSLLVSKMEKSAQEQGKDYTIWAVSGDSVQNHIDKADVLLLGPQVRYM
CCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCCCCCEEEECCHHHHH
LPQLKKLGESKGVPVDVINTVHYGTCNGAEVLKSAEQLGHVS
HHHHHHHCCCCCCCEEEECCEECCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNILLVCAAGMSTSLLVSKMEKSAQEQGKDYTIWAVSGDSVQNHIDKADVLLLGPQVRYM
CCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCCCCCEEEECCHHHHH
LPQLKKLGESKGVPVDVINTVHYGTCNGAEVLKSAEQLGHVS
HHHHHHHCCCCCCCEEEECCEECCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377