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The map label for this gene is ywcH

Identifier: 16080861

GI number: 16080861

Start: 3910302

End: 3911303

Strand: Reverse

Name: ywcH

Synonym: BSU38100

Alternate gene names: 16080861

Gene position: 3911303-3910302 (Counterclockwise)

Preceding gene: 16080862

Following gene: 255767806

Centisome position: 92.78

GC content: 48.7

Gene sequence:

>1002_bases
ATGGTTTCATTAAGTATATTAGATCAATCTCCAGTATCAGAGGGCAGCAATGCAGAAACGGCCTTACAGCAAACCGTTGC
GCTTGCCCAAGCTGCTGAGGACCTTGGATATAAGAGATTTTGGGTTTCTGAGCATCACTTTTCAAAACGGCTGGCAGGGT
CCAGTCCTGAGGTGCTAATCAGTCATATAGCAGCGAAAACAAAGCGAATTCGTGTTGGATCAGGAGGAGTCATGCTGCCG
CATTACAGTGCTTATAAAGTAGCTGAAAACTTTCGTGTTCTGGAGGGGCTGACACCAGGAAGAATTGACCTGGGGCTTGG
CAGAGCACCGGGGGGAATGCCGATTGCATCATGGGCGCTGAATGACGGTGGTAAGCGCAATGCTGATCAGTATCCGCAGC
AAATTAAGGAGCTGACCATGTATTTGCATGATTTGGCGGATGACAAACACCGTTTTCCGAATCTGACCGCTGCGCCGCAT
ATTTCAACGGCTCCGGATGTGTGGCTGCTCGGCTCATCTGGAGAAAGCGCGCTGCTCGCAGCTGAATCTGGCGCTGGCTA
TATGTTTGCCCATTTTATCAATGGAGAGGGCGGAGAGGGTACTGTCAGACAGTATAAGAGGCGATTCAAACCGTCTGTGT
TAGGAGATACGCCTCGAGCGGCAGTTGCTGTTTTTGTTCTTTGTGCTGACACGGAGGAGAAGGCAGAGGAGCTTGGGGCT
GTGCTTGATTTTACACTTTTGGCGGGAGAGCAGGGTATTCCTTTAGAGGGAGTTCCTTCGTATGAAGCTGTTCGGAAAAA
TACGTATTCTCCTTATGAACAGAGACGAATTGCTGATAATCGAAATCGAATGATTGTTGGTACGAAAGAACAGGTTAAGG
AGCGGCTGTTAGCTTTGAGTAACGCGTATGAAACAGAGGAAATCATGGTGGTGACCATCACGCATCATTTTGAAGATAAG
CTCCGATCGTATCGCTTATTGCAGGAGGCGTTTGCTGACTGA

Upstream 100 bases:

>100_bases
ACAAATAAATGGCGAATGATAGGGGACACTGATAAGCAGTGTGAGCGGCTTTGGAGAAAAAATAGGGGATCAGTGATACG
ATGAGGATGAGGTGGTAGGG

Downstream 100 bases:

>100_bases
TCTTTAAAAAGCCCTGCCGAATCGGCAGGGCTTTTTCTTATTCAACAGTGAAAGGTTCTTCGGTCAAAACCTGGCTTGAC
TTGCCTTTGTTCGCGGCATA

Product: monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MVSLSILDQSPVSEGSNAETALQQTVALAQAAEDLGYKRFWVSEHHFSKRLAGSSPEVLISHIAAKTKRIRVGSGGVMLP
HYSAYKVAENFRVLEGLTPGRIDLGLGRAPGGMPIASWALNDGGKRNADQYPQQIKELTMYLHDLADDKHRFPNLTAAPH
ISTAPDVWLLGSSGESALLAAESGAGYMFAHFINGEGGEGTVRQYKRRFKPSVLGDTPRAAVAVFVLCADTEEKAEELGA
VLDFTLLAGEQGIPLEGVPSYEAVRKNTYSPYEQRRIADNRNRMIVGTKEQVKERLLALSNAYETEEIMVVTITHHFEDK
LRSYRLLQEAFAD

Sequences:

>Translated_333_residues
MVSLSILDQSPVSEGSNAETALQQTVALAQAAEDLGYKRFWVSEHHFSKRLAGSSPEVLISHIAAKTKRIRVGSGGVMLP
HYSAYKVAENFRVLEGLTPGRIDLGLGRAPGGMPIASWALNDGGKRNADQYPQQIKELTMYLHDLADDKHRFPNLTAAPH
ISTAPDVWLLGSSGESALLAAESGAGYMFAHFINGEGGEGTVRQYKRRFKPSVLGDTPRAAVAVFVLCADTEEKAEELGA
VLDFTLLAGEQGIPLEGVPSYEAVRKNTYSPYEQRRIADNRNRMIVGTKEQVKERLLALSNAYETEEIMVVTITHHFEDK
LRSYRLLQEAFAD
>Mature_333_residues
MVSLSILDQSPVSEGSNAETALQQTVALAQAAEDLGYKRFWVSEHHFSKRLAGSSPEVLISHIAAKTKRIRVGSGGVMLP
HYSAYKVAENFRVLEGLTPGRIDLGLGRAPGGMPIASWALNDGGKRNADQYPQQIKELTMYLHDLADDKHRFPNLTAAPH
ISTAPDVWLLGSSGESALLAAESGAGYMFAHFINGEGGEGTVRQYKRRFKPSVLGDTPRAAVAVFVLCADTEEKAEELGA
VLDFTLLAGEQGIPLEGVPSYEAVRKNTYSPYEQRRIADNRNRMIVGTKEQVKERLLALSNAYETEEIMVVTITHHFEDK
LRSYRLLQEAFAD

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains

Homologues:

Organism=Escherichia coli, GI1789551, Length=325, Percent_Identity=33.8461538461538, Blast_Score=174, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWCH_BACSU (P39606)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39699
- RefSeq:   NP_391689.1
- ProteinModelPortal:   P39606
- EnsemblBacteria:   EBBACT00000000191
- GeneID:   937286
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38100
- NMPDR:   fig|224308.1.peg.3815
- GenoList:   BSU38100
- GeneTree:   EBGT00050000000501
- HOGENOM:   HBG366829
- OMA:   FVADELI
- PhylomeDB:   P39606
- ProtClustDB:   CLSK872852
- BioCyc:   BSUB:BSU38100-MONOMER
- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949
- Gene3D:   G3DSA:3.20.20.30
- TIGRFAMs:   TIGR03558

Pfam domain/function: PF00296 Bac_luciferase; SSF51679 Luciferase_like

EC number: NA

Molecular weight: Translated: 36558; Mature: 36558

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLSILDQSPVSEGSNAETALQQTVALAQAAEDLGYKRFWVSEHHFSKRLAGSSPEVLI
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCHHHHH
SHIAAKTKRIRVGSGGVMLPHYSAYKVAENFRVLEGLTPGRIDLGLGRAPGGMPIASWAL
HHHHHHHHEEEECCCCEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEE
NDGGKRNADQYPQQIKELTMYLHDLADDKHRFPNLTAAPHISTAPDVWLLGSSGESALLA
CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEEE
AESGAGYMFAHFINGEGGEGTVRQYKRRFKPSVLGDTPRAAVAVFVLCADTEEKAEELGA
ECCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHEEEEEEECCCHHHHHHHHH
VLDFTLLAGEQGIPLEGVPSYEAVRKNTYSPYEQRRIADNRNRMIVGTKEQVKERLLALS
HHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHH
NAYETEEIMVVTITHHFEDKLRSYRLLQEAFAD
CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSLSILDQSPVSEGSNAETALQQTVALAQAAEDLGYKRFWVSEHHFSKRLAGSSPEVLI
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCHHHHH
SHIAAKTKRIRVGSGGVMLPHYSAYKVAENFRVLEGLTPGRIDLGLGRAPGGMPIASWAL
HHHHHHHHEEEECCCCEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEE
NDGGKRNADQYPQQIKELTMYLHDLADDKHRFPNLTAAPHISTAPDVWLLGSSGESALLA
CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEEE
AESGAGYMFAHFINGEGGEGTVRQYKRRFKPSVLGDTPRAAVAVFVLCADTEEKAEELGA
ECCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHEEEEEEECCCHHHHHHHHH
VLDFTLLAGEQGIPLEGVPSYEAVRKNTYSPYEQRRIADNRNRMIVGTKEQVKERLLALS
HHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHH
NAYETEEIMVVTITHHFEDKLRSYRLLQEAFAD
CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377