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The map label for this gene is sacT

Identifier: 16080858

GI number: 16080858

Start: 3906142

End: 3906972

Strand: Reverse

Name: sacT

Synonym: BSU38070

Alternate gene names: 16080858

Gene position: 3906972-3906142 (Counterclockwise)

Preceding gene: 255767806

Following gene: 255767805

Centisome position: 92.68

GC content: 43.44

Gene sequence:

>831_bases
TTGAAAATCTATAAAGTATTAAACAACAATGCGGCTTTAATAAAAGAGGATGATCAGGAAAAAATCGTGATGGGACCGGG
AATCGCTTTTCAAAAAAAGAAAAATGATCTCATCCCTATGAATAAAGTGGAAAAGATCTTTGTCGTGCGCGACGAGAATG
AAAAGTTCAAACAAATCCTGCAAACACTGCCGGAGGAGCATATAGAAATAGCTGAGGATATCATCAGCTATGCGGAAGGA
GAGCTCGCGGCGCCGCTGAGCGATCACATTCATATCGCGCTTTCCGACCATTTGTCCTTTGCGATCGAAAGGATTCAAAA
TGGGCTGCTTGTGCAGAATAAATTGCTGCATGAGATAAAGGCGCTCTATAAAAAAGAATATGAGATCGGCCTGTGGGCGA
TCGGACATGTAAAAGAGACATTGGGCGTGTCTCTGCCTGAAGATGAAGCGGGTTATATTGCCCTTCACATCCATACGGCG
AAGATGGATGCGGAGAGCATGTATTCAGCGCTGAAGCATACGACCATGATCAAAGAAATGATAGAGAAAATAAAACAATA
CTTTAATCGAAAGGTGGATGAAAACAGCATTTCCTATCAACGCCTTGTCACGCATTTGCGATACGCGGTCAGCCGGTTGG
AATCAAATGAAGCGCTCCATCGTATGGACGAGGAGATGCTTTATTTCATCCAAAAAAAGTATTCATTCGCCTATCAATGT
GCGCTGGAGCTGGCGGAGTTTTTGAAAAATGAATATCAATTACATTTGCCGGAATCCGAGGCCGGCTATATCACGCTGCA
TGTCCAGCGTCTTCAAGATCTCTCGGAATAA

Upstream 100 bases:

>100_bases
GGAATCGCCAAAGCAGGAGAGAGCGGGCCCGCATCTTTACATGGCGGTCAAAAGGAGGTAAAATCCCAGTCAAAAGCAAA
TTGGCGGGAGAGATAACCTC

Downstream 100 bases:

>100_bases
CCGCTTTGACTTGCAGGGAGTGATCTCTGGAAGTTTTTTTATTGATCAGGATTCAGTGTGTAGTACATCCAGCCCATCAT
AACTATTCCCGCGGTCAGAT

Product: transcriptional antiterminator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKIYKVLNNNAALIKEDDQEKIVMGPGIAFQKKKNDLIPMNKVEKIFVVRDENEKFKQILQTLPEEHIEIAEDIISYAEG
ELAAPLSDHIHIALSDHLSFAIERIQNGLLVQNKLLHEIKALYKKEYEIGLWAIGHVKETLGVSLPEDEAGYIALHIHTA
KMDAESMYSALKHTTMIKEMIEKIKQYFNRKVDENSISYQRLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSFAYQC
ALELAEFLKNEYQLHLPESEAGYITLHVQRLQDLSE

Sequences:

>Translated_276_residues
MKIYKVLNNNAALIKEDDQEKIVMGPGIAFQKKKNDLIPMNKVEKIFVVRDENEKFKQILQTLPEEHIEIAEDIISYAEG
ELAAPLSDHIHIALSDHLSFAIERIQNGLLVQNKLLHEIKALYKKEYEIGLWAIGHVKETLGVSLPEDEAGYIALHIHTA
KMDAESMYSALKHTTMIKEMIEKIKQYFNRKVDENSISYQRLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSFAYQC
ALELAEFLKNEYQLHLPESEAGYITLHVQRLQDLSE
>Mature_276_residues
MKIYKVLNNNAALIKEDDQEKIVMGPGIAFQKKKNDLIPMNKVEKIFVVRDENEKFKQILQTLPEEHIEIAEDIISYAEG
ELAAPLSDHIHIALSDHLSFAIERIQNGLLVQNKLLHEIKALYKKEYEIGLWAIGHVKETLGVSLPEDEAGYIALHIHTA
KMDAESMYSALKHTTMIKEMIEKIKQYFNRKVDENSISYQRLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSFAYQC
ALELAEFLKNEYQLHLPESEAGYITLHVQRLQDLSE

Specific function: Mediates positive regulation of the sacPA operon by functioning as an antiterminator factor of transcription

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains

Homologues:

Organism=Escherichia coli, GI1790160, Length=275, Percent_Identity=36, Blast_Score=181, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SACT_BACSU (P26212)

Other databases:

- EMBL:   J03006
- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39702
- RefSeq:   NP_391686.1
- ProteinModelPortal:   P26212
- SMR:   P26212
- EnsemblBacteria:   EBBACT00000003986
- GeneID:   937284
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38070
- NMPDR:   fig|224308.1.peg.3812
- GenoList:   BSU38070
- GeneTree:   EBGT00050000000027
- HOGENOM:   HBG515578
- OMA:   KNDEARE
- PhylomeDB:   P26212
- ProtClustDB:   CLSK888093
- BioCyc:   BSUB:BSU38070-MONOMER
- GO:   GO:0006350
- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550
- Gene3D:   G3DSA:2.30.24.10
- Gene3D:   G3DSA:1.10.1790.10

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD; SSF50151 CAT_RBD; SSF63520 PRD

EC number: NA

Molecular weight: Translated: 32074; Mature: 32074

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00654 PRD_1; PS51372 PRD_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYKVLNNNAALIKEDDQEKIVMGPGIAFQKKKNDLIPMNKVEKIFVVRDENEKFKQIL
CEEEEEECCCCEEEEECCCCEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHH
QTLPEEHIEIAEDIISYAEGELAAPLSDHIHIALSDHLSFAIERIQNGLLVQNKLLHEIK
HHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHH
ALYKKEYEIGLWAIGHVKETLGVSLPEDEAGYIALHIHTAKMDAESMYSALKHTTMIKEM
HHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH
IEKIKQYFNRKVDENSISYQRLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSFAYQC
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
ALELAEFLKNEYQLHLPESEAGYITLHVQRLQDLSE
HHHHHHHHHCCCEEECCCCCCCEEEEEHHHHHCCCC
>Mature Secondary Structure
MKIYKVLNNNAALIKEDDQEKIVMGPGIAFQKKKNDLIPMNKVEKIFVVRDENEKFKQIL
CEEEEEECCCCEEEEECCCCEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHH
QTLPEEHIEIAEDIISYAEGELAAPLSDHIHIALSDHLSFAIERIQNGLLVQNKLLHEIK
HHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHH
ALYKKEYEIGLWAIGHVKETLGVSLPEDEAGYIALHIHTAKMDAESMYSALKHTTMIKEM
HHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH
IEKIKQYFNRKVDENSISYQRLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSFAYQC
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
ALELAEFLKNEYQLHLPESEAGYITLHVQRLQDLSE
HHHHHHHHHCCCEEECCCCCCCEEEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2163394; 7934828; 9384377