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The map label for this gene is ywdL

Identifier: 16080843

GI number: 16080843

Start: 3893441

End: 3893986

Strand: Direct

Name: ywdL

Synonym: BSU37920

Alternate gene names: 16080843

Gene position: 3893441-3893986 (Clockwise)

Preceding gene: 16080820

Following gene: 255767801

Centisome position: 92.36

GC content: 49.63

Gene sequence:

>546_bases
ATGAAACCGAAAAAAAATCAATATCAGCAAATGCAGGCATTTGATAATATGCAGGGGTATCAGCCTCAGTTTGGCGCCAA
CCCGTACCCGCAGCAAGGCCAAGGCTCACAAATGCAGACAATGGGGATGCAGCCAATGATGCCAATGCAGCAGGGACAGC
AAGGACAACAAGGACAGCAGGGATTTGGATTCCCGGGCCAGCAGCAGGGCGGCGGTTTTCAAATTCCATCGGGGCCTACA
CCGTCAGGACCGGGCCAAAGCGTTCCCGGCATGCTGCCTGTTGAGGAATCTTACATCGAGAATATTTTGCGCCTGAATCG
GGGAAAAACGGCCACCATTTATATGACATTTGAAAACAGCAAGGAATGGGGCTCGAAGATTTTTCGCGGCGTCATCGAAG
CTGCGGGCCGGGATCACATTATTATCAGCGACCCGAAATCAGGAACACGCTACCTGCTCCTGACAATCTACCTCGATTAC
ATTACATTTGATGAAGAAATTGCTTATACGTATCCATATTCCATGGCGTCCTATTCGCCAAGATAA

Upstream 100 bases:

>100_bases
GCGACTAAGATCGTTTTCCATCGGAGGTGAGTCATCGCGGAGCGTTCACCTATACATCCAGAACATGTTTTGAATGGTTT
TCATAAAAAGGAGGAACGAT

Downstream 100 bases:

>100_bases
GAAAAAAGCCAATCACTCATATGATGAGGATTGGCTTTTTTGTTTATAGATATTTGACGGCTGCGACAACGATCATAATC
CAAGAAATAATAAACGCCAC

Product: spore coat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKPKKNQYQQMQAFDNMQGYQPQFGANPYPQQGQGSQMQTMGMQPMMPMQQGQQGQQGQQGFGFPGQQQGGGFQIPSGPT
PSGPGQSVPGMLPVEESYIENILRLNRGKTATIYMTFENSKEWGSKIFRGVIEAAGRDHIIISDPKSGTRYLLLTIYLDY
ITFDEEIAYTYPYSMASYSPR

Sequences:

>Translated_181_residues
MKPKKNQYQQMQAFDNMQGYQPQFGANPYPQQGQGSQMQTMGMQPMMPMQQGQQGQQGQQGFGFPGQQQGGGFQIPSGPT
PSGPGQSVPGMLPVEESYIENILRLNRGKTATIYMTFENSKEWGSKIFRGVIEAAGRDHIIISDPKSGTRYLLLTIYLDY
ITFDEEIAYTYPYSMASYSPR
>Mature_181_residues
MKPKKNQYQQMQAFDNMQGYQPQFGANPYPQQGQGSQMQTMGMQPMMPMQQGQQGQQGQQGFGFPGQQQGGGFQIPSGPT
PSGPGQSVPGMLPVEESYIENILRLNRGKTATIYMTFENSKEWGSKIFRGVIEAAGRDHIIISDPKSGTRYLLLTIYLDY
ITFDEEIAYTYPYSMASYSPR

Specific function: Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore coat

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GERQ_BACSU (P39620)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39717
- RefSeq:   NP_391671.1
- ProteinModelPortal:   P39620
- EnsemblBacteria:   EBBACT00000003260
- GeneID:   937241
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU37920
- NMPDR:   fig|224308.1.peg.3797
- GenoList:   BSU37920
- GeneTree:   EBGT00050000001545
- OMA:   LDYITFD
- ProtClustDB:   CLSK873717
- BioCyc:   BSUB:BSU37920-MONOMER
- InterPro:   IPR014099
- TIGRFAMs:   TIGR02728

Pfam domain/function: PF09671 Spore_GerQ

EC number: NA

Molecular weight: Translated: 20276; Mature: 20276

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKKNQYQQMQAFDNMQGYQPQFGANPYPQQGQGSQMQTMGMQPMMPMQQGQQGQQGQQ
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHCCCCCCCCCC
GFGFPGQQQGGGFQIPSGPTPSGPGQSVPGMLPVEESYIENILRLNRGKTATIYMTFENS
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCC
KEWGSKIFRGVIEAAGRDHIIISDPKSGTRYLLLTIYLDYITFDEEIAYTYPYSMASYSP
HHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEHHHHHCCCCEEEECCCCCCCCCC
R
C
>Mature Secondary Structure
MKPKKNQYQQMQAFDNMQGYQPQFGANPYPQQGQGSQMQTMGMQPMMPMQQGQQGQQGQQ
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHCCCCCCCCCC
GFGFPGQQQGGGFQIPSGPTPSGPGQSVPGMLPVEESYIENILRLNRGKTATIYMTFENS
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCC
KEWGSKIFRGVIEAAGRDHIIISDPKSGTRYLLLTIYLDYITFDEEIAYTYPYSMASYSP
HHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEHHHHHCCCCEEEECCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377