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The map label for this gene is ywlD

Identifier: 16080747

GI number: 16080747

Start: 3792333

End: 3792890

Strand: Reverse

Name: ywlD

Synonym: BSU36940

Alternate gene names: 16080747

Gene position: 3792890-3792333 (Counterclockwise)

Preceding gene: 16080748

Following gene: 16080746

Centisome position: 89.97

GC content: 49.64

Gene sequence:

>558_bases
ATGTCGGATTTGTTTATAGGCGAACTGATTACATTAAGCATCATGGCGTTTGCTTTAGGGATGGATGCTTTTTCTGTCGG
CCTTGGAATGGGCATGGTCAAACTTAGAAAGAAGCAGATATTCTATATTGGTTTCATCATCGGCCTCTTTCACGTCATCA
TGCCTCTCGCAGGGATGGCGGCCGGTAACATGCTGTCAGGGCTCCTCGGCGTGTTAGCGGTTTATATCGGTGGGGCGCTG
CTTTTTGTTCTTGGGGTTCAAATGCTTATGGCCTCTTTTAAACAGTCAGAAGAACGATTCATGTCACCGGCAGGGCCGGG
CTTATTGCTGTTTGCCATCGGCGTCAGCCTTGACAGCTTTTCCGTCGGCTTGAGCTTGGGGATATACGGCTCGCATCCGC
TCCTCACAATTACCCTGTTCGGGCTGTTCAGCATGATGTTGACATGGCTGGGCCTGCTGGTCGGAAAACAAGTGCAGTCA
TGGCTTGGCACATACAGCGAAGCGCTCGGGGGCATCATATTAATCGTGTTTGGATTAAAGCTGCTTTTGCCAATTTAA

Upstream 100 bases:

>100_bases
CGGAGGAAGAGTGATTCGCTGAAAGCAGTCAGATGTTCTAACCCTTTTTGGACACGCATAGGCTAAAAAAGCGGGGCGTG
TCCAAGGGGGTTATTTATGT

Downstream 100 bases:

>100_bases
TATACCAATAAAAGAAACGAAGTCGCCGTTTCTTTTTTCTTCATATATAATAGAGAAAAATAAGGGGTGACTGACATGGA
TATTATTTTTGTCTGTACTG

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSDLFIGELITLSIMAFALGMDAFSVGLGMGMVKLRKKQIFYIGFIIGLFHVIMPLAGMAAGNMLSGLLGVLAVYIGGAL
LFVLGVQMLMASFKQSEERFMSPAGPGLLLFAIGVSLDSFSVGLSLGIYGSHPLLTITLFGLFSMMLTWLGLLVGKQVQS
WLGTYSEALGGIILIVFGLKLLLPI

Sequences:

>Translated_185_residues
MSDLFIGELITLSIMAFALGMDAFSVGLGMGMVKLRKKQIFYIGFIIGLFHVIMPLAGMAAGNMLSGLLGVLAVYIGGAL
LFVLGVQMLMASFKQSEERFMSPAGPGLLLFAIGVSLDSFSVGLSLGIYGSHPLLTITLFGLFSMMLTWLGLLVGKQVQS
WLGTYSEALGGIILIVFGLKLLLPI
>Mature_184_residues
SDLFIGELITLSIMAFALGMDAFSVGLGMGMVKLRKKQIFYIGFIIGLFHVIMPLAGMAAGNMLSGLLGVLAVYIGGALL
FVLGVQMLMASFKQSEERFMSPAGPGLLLFAIGVSLDSFSVGLSLGIYGSHPLLTITLFGLFSMMLTWLGLLVGKQVQSW
LGTYSEALGGIILIVFGLKLLLPI

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0059 family

Homologues:

Organism=Escherichia coli, GI87081981, Length=175, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWLD_BACSU (P39154)

Other databases:

- EMBL:   Z38002
- EMBL:   AL009126
- PIR:   I40478
- RefSeq:   NP_391575.1
- ProteinModelPortal:   P39154
- EnsemblBacteria:   EBBACT00000002966
- GeneID:   937022
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36940
- NMPDR:   fig|224308.1.peg.3701
- GenoList:   BSU36940
- GeneTree:   EBGT00050000001354
- HOGENOM:   HBG709685
- OMA:   AMDAFGV
- PhylomeDB:   P39154
- ProtClustDB:   CLSK2518286
- BioCyc:   BSUB:BSU36940-MONOMER
- HAMAP:   MF_01521
- InterPro:   IPR003810
- InterPro:   IPR022929

Pfam domain/function: PF02659 DUF204

EC number: NA

Molecular weight: Translated: 19659; Mature: 19528

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12850ec4)-; HASH(0x11f98f98)-; HASH(0x1154ef20)-; HASH(0x12cdda74)-; HASH(0x12f7747c)-; HASH(0x128a96b4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLFIGELITLSIMAFALGMDAFSVGLGMGMVKLRKKQIFYIGFIIGLFHVIMPLAGMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGNMLSGLLGVLAVYIGGALLFVLGVQMLMASFKQSEERFMSPAGPGLLLFAIGVSLDSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SVGLSLGIYGSHPLLTITLFGLFSMMLTWLGLLVGKQVQSWLGTYSEALGGIILIVFGLK
HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLPI
HHCCH
>Mature Secondary Structure 
SDLFIGELITLSIMAFALGMDAFSVGLGMGMVKLRKKQIFYIGFIIGLFHVIMPLAGMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGNMLSGLLGVLAVYIGGALLFVLGVQMLMASFKQSEERFMSPAGPGLLLFAIGVSLDSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SVGLSLGIYGSHPLLTITLFGLFSMMLTWLGLLVGKQVQSWLGTYSEALGGIILIVFGLK
HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLPI
HHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377