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The map label for this gene is atpH

Identifier: 16080737

GI number: 16080737

Start: 3785403

End: 3785948

Strand: Reverse

Name: atpH

Synonym: BSU36840

Alternate gene names: 16080737

Gene position: 3785948-3785403 (Counterclockwise)

Preceding gene: 16080738

Following gene: 16080736

Centisome position: 89.81

GC content: 43.41

Gene sequence:

>546_bases
ATGAGTGGATCAGCTGTCTCTAAACGATATGCATCAGCTCTTTTTGATATAGCCAATGAGTCCGCTCAGCTGAATCAAGT
AGAAGAAGAGCTAATTGTTGTAAAACAAGTATTTCAAAATGAAAAAGCGCTTAATGATGTGTTGAACCATCCGAAGGTGC
CGGCTGCGAAGAAAAAAGAGCTGATTCAAAATGCATTTGGCTCTTTGTCACAGTCCGTACTCAATACGATTTTTCTTTTG
ATTGACCGCCATCGTGCCGCGATTGTCCCTGAGCTCACAGATGAGTTTATCAAACTCGCAAATGTGGCCCGTCAAACAGA
AGACGCAATCGTATATTCAGTGAAACCGCTGACGGATGCAGAAATGTTACCATTATCACAAGTGTTTGCAAAAAAAGCCG
GAGTCGCTTCACTGAGAATCAGAAATGAAGTGCAGACGGATTTAATAGGCGGTATTAAAGTCCGCATTGGAAACCGGATT
TATGACGGCAGCGTAAGCGGGAAGCTTCAGCGCATTGAACGTCAATTAGCCGGGGAAAATCGATAG

Upstream 100 bases:

>100_bases
TTTCTGTCATGATTGCGTCGAAAGTGATCGAAAAAGAACTGGATGAACAAGCGCAAGAGAAATTGATCCAGGACTATCTT
AAAGAGGTAGGAGAAAGCCG

Downstream 100 bases:

>100_bases
AAGGGGTGAAACCTAAGTGAGCATCAAAGCTGAAGAGATTAGCACGCTGATAAAACAGCAAATACAAAATTATCAATCTG
ATATTGAAGTTCAAGACGTA

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSGSAVSKRYASALFDIANESAQLNQVEEELIVVKQVFQNEKALNDVLNHPKVPAAKKKELIQNAFGSLSQSVLNTIFLL
IDRHRAAIVPELTDEFIKLANVARQTEDAIVYSVKPLTDAEMLPLSQVFAKKAGVASLRIRNEVQTDLIGGIKVRIGNRI
YDGSVSGKLQRIERQLAGENR

Sequences:

>Translated_181_residues
MSGSAVSKRYASALFDIANESAQLNQVEEELIVVKQVFQNEKALNDVLNHPKVPAAKKKELIQNAFGSLSQSVLNTIFLL
IDRHRAAIVPELTDEFIKLANVARQTEDAIVYSVKPLTDAEMLPLSQVFAKKAGVASLRIRNEVQTDLIGGIKVRIGNRI
YDGSVSGKLQRIERQLAGENR
>Mature_180_residues
SGSAVSKRYASALFDIANESAQLNQVEEELIVVKQVFQNEKALNDVLNHPKVPAAKKKELIQNAFGSLSQSVLNTIFLLI
DRHRAAIVPELTDEFIKLANVARQTEDAIVYSVKPLTDAEMLPLSQVFAKKAGVASLRIRNEVQTDLIGGIKVRIGNRIY
DGSVSGKLQRIERQLAGENR

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Homo sapiens, GI4502303, Length=175, Percent_Identity=29.7142857142857, Blast_Score=64, Evalue=1e-10,
Organism=Escherichia coli, GI1790173, Length=167, Percent_Identity=23.9520958083832, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_BACSU (P37811)

Other databases:

- EMBL:   Z28592
- EMBL:   AL009126
- PIR:   I40365
- RefSeq:   NP_391565.1
- ProteinModelPortal:   P37811
- SMR:   P37811
- EnsemblBacteria:   EBBACT00000001845
- GeneID:   936997
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36840
- NMPDR:   fig|224308.1.peg.3691
- GenoList:   BSU36840
- GeneTree:   EBGT00050000001610
- HOGENOM:   HBG668108
- OMA:   STVYDGS
- PhylomeDB:   P37811
- ProtClustDB:   PRK05758
- BioCyc:   BSUB:BSU36840-MONOMER
- BRENDA:   3.6.3.14
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19982; Mature: 19851

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSAVSKRYASALFDIANESAQLNQVEEELIVVKQVFQNEKALNDVLNHPKVPAAKKKE
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LIQNAFGSLSQSVLNTIFLLIDRHRAAIVPELTDEFIKLANVARQTEDAIVYSVKPLTDA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC
EMLPLSQVFAKKAGVASLRIRNEVQTDLIGGIKVRIGNRIYDGSVSGKLQRIERQLAGEN
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCEEECCCHHHHHHHHHHHHCCCC
R
C
>Mature Secondary Structure 
SGSAVSKRYASALFDIANESAQLNQVEEELIVVKQVFQNEKALNDVLNHPKVPAAKKKE
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LIQNAFGSLSQSVLNTIFLLIDRHRAAIVPELTDEFIKLANVARQTEDAIVYSVKPLTDA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC
EMLPLSQVFAKKAGVASLRIRNEVQTDLIGGIKVRIGNRIYDGSVSGKLQRIERQLAGEN
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCEEECCCHHHHHHHHHHHHCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961438; 9384377