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The map label for this gene is atpA

Identifier: 16080736

GI number: 16080736

Start: 3783878

End: 3785386

Strand: Reverse

Name: atpA

Synonym: BSU36830

Alternate gene names: 16080736

Gene position: 3785386-3783878 (Counterclockwise)

Preceding gene: 16080737

Following gene: 16080735

Centisome position: 89.79

GC content: 48.77

Gene sequence:

>1509_bases
GTGAGCATCAAAGCTGAAGAGATTAGCACGCTGATAAAACAGCAAATACAAAATTATCAATCTGATATTGAAGTTCAAGA
CGTAGGTACAGTCATCCAAGTCGGTGACGGTATTGCACGTGTGCACGGCCTTGACAACTGTATGGCCGGTGAACTTGTCG
AATTTTCAAACGGTGTTTTGGGTATGGCTCAAAACCTTGAGGAATCAAACGTAGGTATCGTCATCTTAGGACCTTTCAGT
GAGATCCGTGAGGGAGACGAAGTAAAAAGAACAGGCCGCATCATGGAGGTTCCTGTTGGTGAAGAGTTAATCGGCCGTAT
TGTAAACCCGCTAGGCCAGCCGGTTGACGGACTAGGCCCGATTCTGACAAGCAAAACTCGTCCGATCGAAAGCCCTGCAC
CAGGCGTTATGGACCGTAAATCCGTTCATGAACCGCTTCAAACCGGTATCAAAGCGATCGATGCACTGATTCCAATCGGC
CGCGGCCAGCGTGAGCTGATCATCGGTGACCGTCAAACAGGTAAAACATCTGTTGCGATCGATGCGATCCTGAACCAAAA
AGACCAAGACATGATCTGTGTATATGTTGCGATCGGCCAAAAAGAATCAACAGTCCGCGGCGTAGTAGAAACATTGCGTA
AACACGGCGCGCTTGATTATACAATTGTTGTAACGGCGTCTGCGTCACAGCCGGCACCGCTTCTGTACCTGGCACCGTAT
GCTGGGGTTACAATGGCAGAAGAATTTATGTACAACGGCAAGCACGTTCTTGTTGTATACGATGATCTTTCTAAACAAGC
GGCCGCTTACCGTGAGCTGTCCTTGCTTCTTCGCCGTCCGCCAGGCCGTGAAGCGTTCCCTGGGGATGTATTCTATCTTC
ATTCCCGTCTGCTTGAGCGTGCAGCAAAGCTTAGCGACGCGAAAGGCGCAGGATCAATTACAGCTCTGCCGTTCGTAGAA
ACACAAGCCGGAGATATCTCTGCTTATATTCCGACGAACGTCATTTCCATCACCGACGGACAGATCTTCCTGCAATCTGA
TTTGTTCTTCTCAGGCGTACGTCCAGCGATCAATGCCGGATTGTCTGTATCCCGTGTCGGCGGCTCAGCGCAAATCAAAG
CGATGAAAAAAGTATCAGGTACTTTGCGTCTTGACCTTGCGTCATACCGTGAGCTGGAAGCATTCGCTCAATTCGGTTCT
GACCTCGACCAAGCGACTCAGGCAAAACTGAACCGCGGTGCGCGTACAGTTGAAGTGCTGAAGCAGGATCTGAACAAGCC
GCTTCCGGTTGAAAAGCAAGTAGCTATTCTTTATGCGCTGACAAAAGGATATCTCGATGATATTCCTGTGGCGGATATCA
GACGTTTTGAAGAAGAGTACTACATGTACCTTGACCAAAACCATAAAGACCTGCTTGACGGAATTGCGAAAACAGGAAAC
CTTCCTGCTGATGAAGACTTCAAAGCTGCAATCGAAGGCTTCAAACGCACATTTGCACCAAGCAACTAA

Upstream 100 bases:

>100_bases
CGCATTGGAAACCGGATTTATGACGGCAGCGTAAGCGGGAAGCTTCAGCGCATTGAACGTCAATTAGCCGGGGAAAATCG
ATAGAAGGGGTGAAACCTAA

Downstream 100 bases:

>100_bases
CTCGAATGCTGATGAGAGAAAAAGGTTCTCTTTTTCTCTCTTTTTACGCAGATGAAGAGAAAAGGTGGTGAAATCTTTGG
CCTCATTACGCGATATTAAG

Product: F0F1 ATP synthase subunit alpha

Products: NA

Alternate protein names: ATP synthase F1 sector subunit alpha; F-ATPase subunit alpha [H]

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MSIKAEEISTLIKQQIQNYQSDIEVQDVGTVIQVGDGIARVHGLDNCMAGELVEFSNGVLGMAQNLEESNVGIVILGPFS
EIREGDEVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSKTRPIESPAPGVMDRKSVHEPLQTGIKAIDALIPIG
RGQRELIIGDRQTGKTSVAIDAILNQKDQDMICVYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPY
AGVTMAEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDAKGAGSITALPFVE
TQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRVGGSAQIKAMKKVSGTLRLDLASYRELEAFAQFGS
DLDQATQAKLNRGARTVEVLKQDLNKPLPVEKQVAILYALTKGYLDDIPVADIRRFEEEYYMYLDQNHKDLLDGIAKTGN
LPADEDFKAAIEGFKRTFAPSN

Sequences:

>Translated_502_residues
MSIKAEEISTLIKQQIQNYQSDIEVQDVGTVIQVGDGIARVHGLDNCMAGELVEFSNGVLGMAQNLEESNVGIVILGPFS
EIREGDEVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSKTRPIESPAPGVMDRKSVHEPLQTGIKAIDALIPIG
RGQRELIIGDRQTGKTSVAIDAILNQKDQDMICVYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPY
AGVTMAEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDAKGAGSITALPFVE
TQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRVGGSAQIKAMKKVSGTLRLDLASYRELEAFAQFGS
DLDQATQAKLNRGARTVEVLKQDLNKPLPVEKQVAILYALTKGYLDDIPVADIRRFEEEYYMYLDQNHKDLLDGIAKTGN
LPADEDFKAAIEGFKRTFAPSN
>Mature_501_residues
SIKAEEISTLIKQQIQNYQSDIEVQDVGTVIQVGDGIARVHGLDNCMAGELVEFSNGVLGMAQNLEESNVGIVILGPFSE
IREGDEVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSKTRPIESPAPGVMDRKSVHEPLQTGIKAIDALIPIGR
GQRELIIGDRQTGKTSVAIDAILNQKDQDMICVYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYA
GVTMAEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDAKGAGSITALPFVET
QAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRVGGSAQIKAMKKVSGTLRLDLASYRELEAFAQFGSD
LDQATQAKLNRGARTVEVLKQDLNKPLPVEKQVAILYALTKGYLDDIPVADIRRFEEEYYMYLDQNHKDLLDGIAKTGNL
PADEDFKAAIEGFKRTFAPSN

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit [H]

COG id: COG0056

COG function: function code C; F0F1-type ATP synthase, alpha subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI50345984, Length=490, Percent_Identity=58.7755102040816, Blast_Score=594, Evalue=1e-170,
Organism=Homo sapiens, GI4757810, Length=490, Percent_Identity=58.7755102040816, Blast_Score=594, Evalue=1e-170,
Organism=Homo sapiens, GI19913428, Length=307, Percent_Identity=30.2931596091205, Blast_Score=120, Evalue=4e-27,
Organism=Homo sapiens, GI19913426, Length=351, Percent_Identity=30.4843304843305, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI32189394, Length=426, Percent_Identity=25.1173708920188, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI19913424, Length=263, Percent_Identity=26.9961977186312, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1790172, Length=510, Percent_Identity=54.5098039215686, Blast_Score=563, Evalue=1e-161,
Organism=Escherichia coli, GI1788251, Length=272, Percent_Identity=33.0882352941176, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1790170, Length=349, Percent_Identity=27.7936962750716, Blast_Score=108, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71988063, Length=504, Percent_Identity=56.9444444444444, Blast_Score=595, Evalue=1e-170,
Organism=Caenorhabditis elegans, GI71988080, Length=504, Percent_Identity=56.9444444444444, Blast_Score=594, Evalue=1e-170,
Organism=Caenorhabditis elegans, GI71988074, Length=504, Percent_Identity=52.9761904761905, Blast_Score=541, Evalue=1e-154,
Organism=Caenorhabditis elegans, GI17510931, Length=467, Percent_Identity=27.4089935760171, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17570191, Length=298, Percent_Identity=30.2013422818792, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI25144756, Length=426, Percent_Identity=24.1784037558685, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71988068, Length=73, Percent_Identity=43.8356164383562, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17509265, Length=51, Percent_Identity=60.7843137254902, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565854, Length=259, Percent_Identity=27.7992277992278, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319370, Length=509, Percent_Identity=57.5638506876228, Blast_Score=592, Evalue=1e-170,
Organism=Saccharomyces cerevisiae, GI6319603, Length=304, Percent_Identity=29.2763157894737, Blast_Score=117, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6322581, Length=425, Percent_Identity=25.8823529411765, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24658560, Length=505, Percent_Identity=57.029702970297, Blast_Score=587, Evalue=1e-168,
Organism=Drosophila melanogaster, GI281361666, Length=301, Percent_Identity=30.2325581395349, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24646341, Length=301, Percent_Identity=30.2325581395349, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI17136796, Length=301, Percent_Identity=30.2325581395349, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24638766, Length=425, Percent_Identity=25.8823529411765, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI28574560, Length=420, Percent_Identity=26.6666666666667, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24583992, Length=260, Percent_Identity=27.3076923076923, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24583988, Length=263, Percent_Identity=26.9961977186312, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24583986, Length=263, Percent_Identity=26.9961977186312, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24583984, Length=263, Percent_Identity=26.9961977186312, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI20129479, Length=263, Percent_Identity=27.7566539923954, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: 9,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR005294
- InterPro:   IPR017458
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 54599; Mature: 54468

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKAEEISTLIKQQIQNYQSDIEVQDVGTVIQVGDGIARVHGLDNCMAGELVEFSNGVL
CCCCHHHHHHHHHHHHHHHHHCCCHHHCCCEEECCCCHHHHHCCCCHHHHHHHHHCCCHH
GMAQNLEESNVGIVILGPFSEIREGDEVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGP
HHHHCCCCCCCCEEEECCHHHHHCCHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCH
ILTSKTRPIESPAPGVMDRKSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAI
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHH
DAILNQKDQDMICVYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPY
HHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCC
AGVTMAEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLER
CCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AAKLSDAKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAG
HHHHCCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEECCEEEEECCCHHHCCCHHHHCC
LSVSRVGGSAQIKAMKKVSGTLRLDLASYRELEAFAQFGSDLDQATQAKLNRGARTVEVL
CEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
KQDLNKPLPVEKQVAILYALTKGYLDDIPVADIRRFEEEYYMYLDQNHKDLLDGIAKTGN
HHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHCCC
LPADEDFKAAIEGFKRTFAPSN
CCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SIKAEEISTLIKQQIQNYQSDIEVQDVGTVIQVGDGIARVHGLDNCMAGELVEFSNGVL
CCCHHHHHHHHHHHHHHHHHCCCHHHCCCEEECCCCHHHHHCCCCHHHHHHHHHCCCHH
GMAQNLEESNVGIVILGPFSEIREGDEVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGP
HHHHCCCCCCCCEEEECCHHHHHCCHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCH
ILTSKTRPIESPAPGVMDRKSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAI
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHH
DAILNQKDQDMICVYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPY
HHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCC
AGVTMAEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLER
CCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AAKLSDAKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAG
HHHHCCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEECCEEEEECCCHHHCCCHHHHCC
LSVSRVGGSAQIKAMKKVSGTLRLDLASYRELEAFAQFGSDLDQATQAKLNRGARTVEVL
CEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
KQDLNKPLPVEKQVAILYALTKGYLDDIPVADIRRFEEEYYMYLDQNHKDLLDGIAKTGN
HHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHCCC
LPADEDFKAAIEGFKRTFAPSN
CCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA