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The map label for this gene is ywmB

Identifier: 16080730

GI number: 16080730

Start: 3779293

End: 3780033

Strand: Reverse

Name: ywmB

Synonym: BSU36770

Alternate gene names: 16080730

Gene position: 3780033-3779293 (Counterclockwise)

Preceding gene: 16080731

Following gene: 16080729

Centisome position: 89.67

GC content: 36.17

Gene sequence:

>741_bases
ATGAAGAAAAAACAAGTAAGCCACGCTATTATCATTTCCGTCATGTTAAGCTTCGTCATTGCTGTTTTCCATACCATTCA
TGCGAGTGAATTAACGCCGTTAGCACAGATGGCAGAGGGGATGGAACGTCAAGATGTGTCAATAGATAAGTGGACATTGC
ATGCAAAACAAAACTTGTCACTGACCGAAAAAGAATTTTATCAAAAAGTGCAACGTTTAAAACAAGAGTATCGTCAATAT
GATTGGGTGATTGCACGGGAAGATAAAATGATAAAGGCAATTGGCACATATACTGACAAAAAAAATCGTACTTCTTTTAG
ACTGCAGCTTGTCACAACCCTCAAAAAACACAATCCAACTTCGTATTTATTATATGAGCAAATGAGTCTAGAGACACCGG
ATAGCTGGAATGATACATATGAACAGTTTGAACGGGAGACACTTGGGATATTCCAAGAAAAAGTAGTTATTTTTACTTGT
CTAAATGGTCACTTAGATGATAATATGAATATTGTTTTGCAAAAAAAAGCAAATCAGTTATTAAATGAATTTCAAGCAAG
ATCAGTAGAACATGTAGTTGAGCCAAATTTCGTTTCTATTTCTGCGTTTACAGATGAGTGGGAAGAGTACATTATGACCT
CGAAACATAAAATGAATTTGCAAATTGCACTTAGAAGTGCAGGAATGGGCGGAAAACATACCGTTACGGTTGGCACACCA
ATCGTTACGACTGAATATTAA

Upstream 100 bases:

>100_bases
GAGAAGCGGGTTGAAGCGAATAGCTCGAGTTTTGACGAAGATTTTTACGTATGGCGCCTCTTGCCTCCGGTAAAACTGGG
GATAAGGGGGAGAGATGAAC

Downstream 100 bases:

>100_bases
TATAGAGAATTTAGGGACGCGGAGGGGAATACCTTGGAAAAAATCATCGTCCGCGGCGGTCAGAAGTTAAACGGCACAGT
CAAAGTTGAAGGCGCTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKKKQVSHAIIISVMLSFVIAVFHTIHASELTPLAQMAEGMERQDVSIDKWTLHAKQNLSLTEKEFYQKVQRLKQEYRQY
DWVIAREDKMIKAIGTYTDKKNRTSFRLQLVTTLKKHNPTSYLLYEQMSLETPDSWNDTYEQFERETLGIFQEKVVIFTC
LNGHLDDNMNIVLQKKANQLLNEFQARSVEHVVEPNFVSISAFTDEWEEYIMTSKHKMNLQIALRSAGMGGKHTVTVGTP
IVTTEY

Sequences:

>Translated_246_residues
MKKKQVSHAIIISVMLSFVIAVFHTIHASELTPLAQMAEGMERQDVSIDKWTLHAKQNLSLTEKEFYQKVQRLKQEYRQY
DWVIAREDKMIKAIGTYTDKKNRTSFRLQLVTTLKKHNPTSYLLYEQMSLETPDSWNDTYEQFERETLGIFQEKVVIFTC
LNGHLDDNMNIVLQKKANQLLNEFQARSVEHVVEPNFVSISAFTDEWEEYIMTSKHKMNLQIALRSAGMGGKHTVTVGTP
IVTTEY
>Mature_246_residues
MKKKQVSHAIIISVMLSFVIAVFHTIHASELTPLAQMAEGMERQDVSIDKWTLHAKQNLSLTEKEFYQKVQRLKQEYRQY
DWVIAREDKMIKAIGTYTDKKNRTSFRLQLVTTLKKHNPTSYLLYEQMSLETPDSWNDTYEQFERETLGIFQEKVVIFTC
LNGHLDDNMNIVLQKKANQLLNEFQARSVEHVVEPNFVSISAFTDEWEEYIMTSKHKMNLQIALRSAGMGGKHTVTVGTP
IVTTEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWMB_BACSU (O32277)

Other databases:

- EMBL:   Z81356
- EMBL:   AL009126
- PIR:   F70062
- RefSeq:   NP_391558.1
- PDB:   2FPN
- PDBsum:   2FPN
- ProteinModelPortal:   O32277
- SMR:   O32277
- EnsemblBacteria:   EBBACT00000003619
- GeneID:   936983
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36770
- NMPDR:   fig|224308.1.peg.3684
- GenoList:   BSU36770
- GeneTree:   EBGT00050000002045
- HOGENOM:   HBG338405
- OMA:   MESMIAA
- ProtClustDB:   CLSK2393405
- BioCyc:   BSUB:BSU36770-MONOMER
- InterPro:   IPR014794

Pfam domain/function: PF08680 DUF1779

EC number: NA

Molecular weight: Translated: 28627; Mature: 28627

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKQVSHAIIISVMLSFVIAVFHTIHASELTPLAQMAEGMERQDVSIDKWTLHAKQNLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEECCCCCC
LTEKEFYQKVQRLKQEYRQYDWVIAREDKMIKAIGTYTDKKNRTSFRLQLVTTLKKHNPT
CHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHCCCCCCCCCHHEEHHHHHHHHCCCC
SYLLYEQMSLETPDSWNDTYEQFERETLGIFQEKVVIFTCLNGHLDDNMNIVLQKKANQL
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEHHHHHH
LNEFQARSVEHVVEPNFVSISAFTDEWEEYIMTSKHKMNLQIALRSAGMGGKHTVTVGTP
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCC
IVTTEY
EEEECC
>Mature Secondary Structure
MKKKQVSHAIIISVMLSFVIAVFHTIHASELTPLAQMAEGMERQDVSIDKWTLHAKQNLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEECCCCCC
LTEKEFYQKVQRLKQEYRQYDWVIAREDKMIKAIGTYTDKKNRTSFRLQLVTTLKKHNPT
CHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHCCCCCCCCCHHEEHHHHHHHHCCCC
SYLLYEQMSLETPDSWNDTYEQFERETLGIFQEKVVIFTCLNGHLDDNMNIVLQKKANQL
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEHHHHHH
LNEFQARSVEHVVEPNFVSISAFTDEWEEYIMTSKHKMNLQIALRSAGMGGKHTVTVGTP
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCC
IVTTEY
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377