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The map label for this gene is ywqC

Identifier: 16080679

GI number: 16080679

Start: 3732525

End: 3733271

Strand: Reverse

Name: ywqC

Synonym: BSU36260

Alternate gene names: 16080679

Gene position: 3733271-3732525 (Counterclockwise)

Preceding gene: 255767780

Following gene: 16080678

Centisome position: 88.56

GC content: 43.64

Gene sequence:

>747_bases
ATGGGAGAATCTACAAGCTTAAAAGAGATATTATCAACGTTAACAAAACGCATACTTTTGATTATGATTGTAACCGCGGC
TGCCACTGCTGCCGGCGGACTCATTAGTTTCTTCGCACTTACACCCATCTATGAAAATTCAACTCAGATTCTGGTCAACC
AATCGAAAAATGAACGAAAAGAAGTCCAATTTAACGATGTCCAAACCAATCTTCAGTTAATCAATACGTACAATGTCATC
ATTAAGAGCCCTGCCATCTTAGATGAAGTCATTAAAGAAATGGGCCTGTCGATGACATCCCAAGAACTGAATGACAAAAT
TACCGTATCCAGCGAACAGGACTCCCAAGTGGTCAACATATCAGTCAGGGATGAAAACGCGGAAACAGCGGCTCATATTG
CCAATACTATAGCATCTGTTTTTCAAGACAAAATCACATCCATTATGAATGTTGACAATGTCAGCATTCTGTCAAAAGCC
GAGGTTTCAGAACACCCGTCCCCTGTATCGCCAAAGCCGCTACTAAACATTGCCATCGCGTTTGCGGCCGGATTGGCGGG
AAGCATCGGACTGGCCTTCCTGCTTGAGCATTTGGATAATACGATCAAATCGGAAGAGCAGCTCGAATCCTTGCTGGACA
TACCTGTTTTAGGGACAGTTTCCACCATTGCGAATGAGCAGAAAACAGCAAAGACCTTACAGGGTTTCCAATCTGAAAAA
ACGGGGAGTGGACATTTTGGCGCTTAG

Upstream 100 bases:

>100_bases
AAAAATGTCGAATTATGTCACGTGAAAAGCTGGAGAAATGCGGTTTCAACGTTGTATAATCGTAGATGGAAAAGGATGTT
ATAAGAGATTTGGAGGTATC

Downstream 100 bases:

>100_bases
AAAAAACAGAGGCTCGCGGATGCAGAGAAATGTCATTGCAATGACAGAGCCGAAATCCTTGAACTCTGAACAATATCGGA
CGATTCGCACGAATATAGAA

Product: modulator of YwqD protein tyrosine kinase activity

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MGESTSLKEILSTLTKRILLIMIVTAAATAAGGLISFFALTPIYENSTQILVNQSKNERKEVQFNDVQTNLQLINTYNVI
IKSPAILDEVIKEMGLSMTSQELNDKITVSSEQDSQVVNISVRDENAETAAHIANTIASVFQDKITSIMNVDNVSILSKA
EVSEHPSPVSPKPLLNIAIAFAAGLAGSIGLAFLLEHLDNTIKSEEQLESLLDIPVLGTVSTIANEQKTAKTLQGFQSEK
TGSGHFGA

Sequences:

>Translated_248_residues
MGESTSLKEILSTLTKRILLIMIVTAAATAAGGLISFFALTPIYENSTQILVNQSKNERKEVQFNDVQTNLQLINTYNVI
IKSPAILDEVIKEMGLSMTSQELNDKITVSSEQDSQVVNISVRDENAETAAHIANTIASVFQDKITSIMNVDNVSILSKA
EVSEHPSPVSPKPLLNIAIAFAAGLAGSIGLAFLLEHLDNTIKSEEQLESLLDIPVLGTVSTIANEQKTAKTLQGFQSEK
TGSGHFGA
>Mature_247_residues
GESTSLKEILSTLTKRILLIMIVTAAATAAGGLISFFALTPIYENSTQILVNQSKNERKEVQFNDVQTNLQLINTYNVII
KSPAILDEVIKEMGLSMTSQELNDKITVSSEQDSQVVNISVRDENAETAAHIANTIASVFQDKITSIMNVDNVSILSKAE
VSEHPSPVSPKPLLNIAIAFAAGLAGSIGLAFLLEHLDNTIKSEEQLESLLDIPVLGTVSTIANEQKTAKTLQGFQSEKT
GSGHFGA

Specific function: Required for YwqD kinase activity. May bring YwqD and its substrates into contact. Probably involved in the regulation of capsular polysaccharide biosynthesis

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWQC_BACSU (P96715)

Other databases:

- EMBL:   Z92952
- EMBL:   AL009126
- PIR:   F70066
- RefSeq:   NP_391507.1
- ProteinModelPortal:   P96715
- EnsemblBacteria:   EBBACT00000001717
- GeneID:   936897
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36260
- NMPDR:   fig|224308.1.peg.3633
- GenoList:   BSU36260
- GeneTree:   EBGT00050000002014
- HOGENOM:   HBG697325
- OMA:   YQSSTQI
- ProtClustDB:   CLSK2752532
- BioCyc:   BSUB:BSU36260-MONOMER
- InterPro:   IPR003856

Pfam domain/function: PF02706 Wzz

EC number: NA

Molecular weight: Translated: 26641; Mature: 26509

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11c76c38)-; HASH(0x12c60198)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGESTSLKEILSTLTKRILLIMIVTAAATAAGGLISFFALTPIYENSTQILVNQSKNERK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH
EVQFNDVQTNLQLINTYNVIIKSPAILDEVIKEMGLSMTSQELNDKITVSSEQDSQVVNI
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCCEEEEE
SVRDENAETAAHIANTIASVFQDKITSIMNVDNVSILSKAEVSEHPSPVSPKPLLNIAIA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
FAAGLAGSIGLAFLLEHLDNTIKSEEQLESLLDIPVLGTVSTIANEQKTAKTLQGFQSEK
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
TGSGHFGA
CCCCCCCH
>Mature Secondary Structure 
GESTSLKEILSTLTKRILLIMIVTAAATAAGGLISFFALTPIYENSTQILVNQSKNERK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH
EVQFNDVQTNLQLINTYNVIIKSPAILDEVIKEMGLSMTSQELNDKITVSSEQDSQVVNI
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCCEEEEE
SVRDENAETAAHIANTIASVFQDKITSIMNVDNVSILSKAEVSEHPSPVSPKPLLNIAIA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
FAAGLAGSIGLAFLLEHLDNTIKSEEQLESLLDIPVLGTVSTIANEQKTAKTLQGFQSEK
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
TGSGHFGA
CCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377