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The map label for this gene is ptkA

Identifier: 16080678

GI number: 16080678

Start: 3731822

End: 3732535

Strand: Reverse

Name: ptkA

Synonym: BSU36250

Alternate gene names: 16080678

Gene position: 3732535-3731822 (Counterclockwise)

Preceding gene: 16080679

Following gene: 16080677

Centisome position: 88.54

GC content: 46.22

Gene sequence:

>714_bases
TTGGCGCTTAGAAAAAACAGAGGCTCGCGGATGCAGAGAAATGTCATTGCAATGACAGAGCCGAAATCCTTGAACTCTGA
ACAATATCGGACGATTCGCACGAATATAGAATTTGCTTCAGTGGACCGGCAAATGAAATCAGTCATGATTACATCGGCTT
GTCCGGGGGAAGGAAAATCAACAACGGCCGCCAACCTGGCTGTCGTATTCGCCCAACAGGGAAAAAAAGTGCTCCTGATT
GATGCTGATTTGCGAAAACCAACAGTACATACGGCTTTTTTTCTTGAAAATACGGTTGGCTTAACATCTGTTTTATTAAA
GAAAAGCTCTATGGAGCAGGCTGTACAAGCATCGAATGAAAAACATCTTGACGTGCTGACGAGCGGCCCGATCCCGCCAA
ACCCGGCCGAGCTTCTCTCCTCGAAGTGGATGAAGGAGCTTGCATACGAAGCGTGTGCGGCATATGATATGGTCATTTTT
GATACGCCGCCTATTCTTGCCGTAGCAGATGCACAGATTTTAGGCAACGTGGCAGACGGTTCTGTTCTGGTTATTTCAAG
CGGGAAAACAGAAAAAGAACAAGCCGCAAAAGCGAAAGAGGCGCTTGCAACGTGCAAAAGCAAGCTCCTTGGGGCGATTA
TGAACGGCAAAAAGCTTTCGAAGCACTCTGAATACGGATATTACGGAACCAAGGACAATTTCATGCAAAAATAA

Upstream 100 bases:

>100_bases
GACATACCTGTTTTAGGGACAGTTTCCACCATTGCGAATGAGCAGAAAACAGCAAAGACCTTACAGGGTTTCCAATCTGA
AAAAACGGGGAGTGGACATT

Downstream 100 bases:

>100_bases
ATAACGTGCATCGTGCCCGTTATTTATTTTTGCGAAAAAAGGGGGCTAGGACATGATCGATATTCACTGTCACATTCTTC
CCGCAATGGATGACGGGGCA

Product: protein tyrosine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MALRKNRGSRMQRNVIAMTEPKSLNSEQYRTIRTNIEFASVDRQMKSVMITSACPGEGKSTTAANLAVVFAQQGKKVLLI
DADLRKPTVHTAFFLENTVGLTSVLLKKSSMEQAVQASNEKHLDVLTSGPIPPNPAELLSSKWMKELAYEACAAYDMVIF
DTPPILAVADAQILGNVADGSVLVISSGKTEKEQAAKAKEALATCKSKLLGAIMNGKKLSKHSEYGYYGTKDNFMQK

Sequences:

>Translated_237_residues
MALRKNRGSRMQRNVIAMTEPKSLNSEQYRTIRTNIEFASVDRQMKSVMITSACPGEGKSTTAANLAVVFAQQGKKVLLI
DADLRKPTVHTAFFLENTVGLTSVLLKKSSMEQAVQASNEKHLDVLTSGPIPPNPAELLSSKWMKELAYEACAAYDMVIF
DTPPILAVADAQILGNVADGSVLVISSGKTEKEQAAKAKEALATCKSKLLGAIMNGKKLSKHSEYGYYGTKDNFMQK
>Mature_236_residues
ALRKNRGSRMQRNVIAMTEPKSLNSEQYRTIRTNIEFASVDRQMKSVMITSACPGEGKSTTAANLAVVFAQQGKKVLLID
ADLRKPTVHTAFFLENTVGLTSVLLKKSSMEQAVQASNEKHLDVLTSGPIPPNPAELLSSKWMKELAYEACAAYDMVIFD
TPPILAVADAQILGNVADGSVLVISSGKTEKEQAAKAKEALATCKSKLLGAIMNGKKLSKHSEYGYYGTKDNFMQK

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family

Homologues:

Organism=Escherichia coli, GI1787216, Length=219, Percent_Identity=36.5296803652968, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI87082032, Length=221, Percent_Identity=33.9366515837104, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWQD_BACSU (P96716)

Other databases:

- EMBL:   Z92952
- EMBL:   AL009126
- PIR:   G70066
- RefSeq:   NP_391506.1
- ProteinModelPortal:   P96716
- SMR:   P96716
- PhosSite:   P96716
- EnsemblBacteria:   EBBACT00000000206
- GeneID:   936896
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36250
- NMPDR:   fig|224308.1.peg.3632
- GenoList:   BSU36250
- GeneTree:   EBGT00050000000812
- HOGENOM:   HBG639890
- OMA:   RRRVANM
- ProtClustDB:   CLSK888014
- BioCyc:   BSUB:BSU36250-MONOMER
- BRENDA:   2.7.10.2
- InterPro:   IPR002586
- InterPro:   IPR005702
- TIGRFAMs:   TIGR01007

Pfam domain/function: PF01656 CbiA

EC number: =2.7.10.2

Molecular weight: Translated: 25790; Mature: 25659

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRKNRGSRMQRNVIAMTEPKSLNSEQYRTIRTNIEFASVDRQMKSVMITSACPGEGKS
CCCCCCCCCHHHCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCCC
TTAANLAVVFAQQGKKVLLIDADLRKPTVHTAFFLENTVGLTSVLLKKSSMEQAVQASNE
CCHHHEEEEEECCCCEEEEEECCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCC
KHLDVLTSGPIPPNPAELLSSKWMKELAYEACAAYDMVIFDTPPILAVADAQILGNVADG
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECHHHHCCCCCC
SVLVISSGKTEKEQAAKAKEALATCKSKLLGAIMNGKKLSKHSEYGYYGTKDNFMQK
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
ALRKNRGSRMQRNVIAMTEPKSLNSEQYRTIRTNIEFASVDRQMKSVMITSACPGEGKS
CCCCCCCCHHHCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCCC
TTAANLAVVFAQQGKKVLLIDADLRKPTVHTAFFLENTVGLTSVLLKKSSMEQAVQASNE
CCHHHEEEEEECCCCEEEEEECCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCC
KHLDVLTSGPIPPNPAELLSSKWMKELAYEACAAYDMVIFDTPPILAVADAQILGNVADG
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECHHHHCCCCCC
SVLVISSGKTEKEQAAKAKEALATCKSKLLGAIMNGKKLSKHSEYGYYGTKDNFMQK
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377