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The map label for this gene is yvhJ

Identifier: 16080605

GI number: 16080605

Start: 3647406

End: 3648581

Strand: Direct

Name: yvhJ

Synonym: BSU35520

Alternate gene names: 16080605

Gene position: 3647406-3648581 (Clockwise)

Preceding gene: 16080604

Following gene: 16080618

Centisome position: 86.52

GC content: 41.58

Gene sequence:

>1176_bases
ATGGCTGAACGCGTTAGAGTGCGTGTGCGAAAAAAGAAAAAGAGCAAACGTAGGAAAATTTTAAAAAGAATAATGTTATT
GTTCGCCCTTGCACTATTGGTAGTTGTAGGGCTTGGCGGGTATAAACTTTATAAAACCATTAACGCTGCGGATGAATCGT
ACGATGCCCTATCCCGCGGGAATAAATCAAATCTTCGCAACGAAGTTGTAGACATGAAGAAAAAACCATTTTCTATTTTA
TTTATGGGAATAGAGGATTACGCGACTAAAGGACAAAAAGGGAGATCAGACTCTCTTATTGTTGTTACCCTGGATCCCAA
AAATAAAACCATGAAAATGCTGAGCATTCCGCGTGACACACGTGTGCAATTAGCTGGTGACACAACGGGAAGCAAGACGA
AGATCAATGCCGCTTACAGCAAAGGCGGTAAAGATGAAACAGTTGAAACTGTTGAAAACTTCTTGCAAATCCCGATCGAT
AAATATGTCACAGTTGATTTTGACGGATTTAAAGATGTGATTAATGAAGTCGGCGGTATTGATGTTGACGTGCCTTTCGA
TTTCGATGAAAAAAGTGATGTAGACGAAAGCAAACGGATTTACTTCAAAAAAGGCGAGATGCATTTGAACGGCGAAGAAG
CCTTAGCATATGCCCGGATGAGAAAACAGGATAAACGCGGAGACTTTGGCCGTAATGACAGACAAAAACAAATCTTAAAC
GCGCTGATTGACCGCATGTCAAGTGCAAGCAACATTGCTAAAATTGATAAAATCGCAGAAAAAGCCAGCGAAAACGTTGA
AACCAATATTCGCATTACTGAAGGTTTAGCGCTTCAGCAGATTTACAGCGGCTTTACCAGCAAAAAAATCGACACATTGA
GCATTACAGGTTCTGATTTGTATTTAGGGCCTAACAACACATATTACTTTGAACCTGATGCTACAAATCTCGAGAAAGTC
AGAAAAACGCTTCAAGAGCATTTAGATTATACTCCTGATACAAGCACTGGCACTTCCGGTACCGAAGACGGGACTGACAG
CTCAAGCAGTTCTGGCAGCACTGGCAGCACTGGCACAACAACTGACGGGACGACGAACGGAAGCAGCTATTCGAATGACA
GCAGCACAAGCTCAAACAACAGTACAACGAATTCAACAACTGATTCATCCTATTAA

Upstream 100 bases:

>100_bases
CTGAATGGATGACAGAACTGACAAATGGAAAGAGTGATATTAAAGAGGGAGAGTTGACGTATCTTGAAAAAGCCGTCAAT
CACATAAAGGAGACTGAATA

Downstream 100 bases:

>100_bases
AAAATGCCCGGTCCTTTTAGAGGATCGGGCATTTTTGCGCAGAAAAAAACTCCGGCACATAAGCCGGAGTTTTTAATTCC
TTTTCACCAGCCGTTTATAA

Product: membrane bound transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MAERVRVRVRKKKKSKRRKILKRIMLLFALALLVVVGLGGYKLYKTINAADESYDALSRGNKSNLRNEVVDMKKKPFSIL
FMGIEDYATKGQKGRSDSLIVVTLDPKNKTMKMLSIPRDTRVQLAGDTTGSKTKINAAYSKGGKDETVETVENFLQIPID
KYVTVDFDGFKDVINEVGGIDVDVPFDFDEKSDVDESKRIYFKKGEMHLNGEEALAYARMRKQDKRGDFGRNDRQKQILN
ALIDRMSSASNIAKIDKIAEKASENVETNIRITEGLALQQIYSGFTSKKIDTLSITGSDLYLGPNNTYYFEPDATNLEKV
RKTLQEHLDYTPDTSTGTSGTEDGTDSSSSSGSTGSTGTTTDGTTNGSSYSNDSSTSSNNSTTNSTTDSSY

Sequences:

>Translated_391_residues
MAERVRVRVRKKKKSKRRKILKRIMLLFALALLVVVGLGGYKLYKTINAADESYDALSRGNKSNLRNEVVDMKKKPFSIL
FMGIEDYATKGQKGRSDSLIVVTLDPKNKTMKMLSIPRDTRVQLAGDTTGSKTKINAAYSKGGKDETVETVENFLQIPID
KYVTVDFDGFKDVINEVGGIDVDVPFDFDEKSDVDESKRIYFKKGEMHLNGEEALAYARMRKQDKRGDFGRNDRQKQILN
ALIDRMSSASNIAKIDKIAEKASENVETNIRITEGLALQQIYSGFTSKKIDTLSITGSDLYLGPNNTYYFEPDATNLEKV
RKTLQEHLDYTPDTSTGTSGTEDGTDSSSSSGSTGSTGTTTDGTTNGSSYSNDSSTSSNNSTTNSTTDSSY
>Mature_390_residues
AERVRVRVRKKKKSKRRKILKRIMLLFALALLVVVGLGGYKLYKTINAADESYDALSRGNKSNLRNEVVDMKKKPFSILF
MGIEDYATKGQKGRSDSLIVVTLDPKNKTMKMLSIPRDTRVQLAGDTTGSKTKINAAYSKGGKDETVETVENFLQIPIDK
YVTVDFDGFKDVINEVGGIDVDVPFDFDEKSDVDESKRIYFKKGEMHLNGEEALAYARMRKQDKRGDFGRNDRQKQILNA
LIDRMSSASNIAKIDKIAEKASENVETNIRITEGLALQQIYSGFTSKKIDTLSITGSDLYLGPNNTYYFEPDATNLEKVR
KTLQEHLDYTPDTSTGTSGTEDGTDSSSSSGSTGSTGTTTDGTTNGSSYSNDSSTSSNNSTTNSTTDSSY

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVHJ_BACSU (P96499)

Other databases:

- EMBL:   U56901
- EMBL:   AL009126
- PIR:   H70041
- RefSeq:   NP_391432.1
- PDB:   3NXH
- PDBsum:   3NXH
- ProteinModelPortal:   P96499
- SMR:   P96499
- EnsemblBacteria:   EBBACT00000002517
- GeneID:   936761
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35520
- NMPDR:   fig|224308.1.peg.3558
- GenoList:   BSU35520
- GeneTree:   EBGT00070000031934
- HOGENOM:   HBG304505
- OMA:   DSLMFAT
- PhylomeDB:   P96499
- ProtClustDB:   CLSK2752528
- BioCyc:   BSUB:BSU35520-MONOMER
- GO:   GO:0006350
- InterPro:   IPR004474
- TIGRFAMs:   TIGR00350

Pfam domain/function: PF03816 LytR_cpsA_psr

EC number: NA

Molecular weight: Translated: 43212; Mature: 43081

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12e89604)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERVRVRVRKKKKSKRRKILKRIMLLFALALLVVVGLGGYKLYKTINAADESYDALSRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCC
NKSNLRNEVVDMKKKPFSILFMGIEDYATKGQKGRSDSLIVVTLDPKNKTMKMLSIPRDT
CHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEECCCCC
RVQLAGDTTGSKTKINAAYSKGGKDETVETVENFLQIPIDKYVTVDFDGFKDVINEVGGI
EEEEECCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCC
DVDVPFDFDEKSDVDESKRIYFKKGEMHLNGEEALAYARMRKQDKRGDFGRNDRQKQILN
EEECCCCCCCCCCCCCCCEEEEECCCEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALIDRMSSASNIAKIDKIAEKASENVETNIRITEGLALQQIYSGFTSKKIDTLSITGSDL
HHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCHHCCCCEEEEEECCEE
YLGPNNTYYFEPDATNLEKVRKTLQEHLDYTPDTSTGTSGTEDGTDSSSSSGSTGSTGTT
EECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDGTTNGSSYSNDSSTSSNNSTTNSTTDSSY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure 
AERVRVRVRKKKKSKRRKILKRIMLLFALALLVVVGLGGYKLYKTINAADESYDALSRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCC
NKSNLRNEVVDMKKKPFSILFMGIEDYATKGQKGRSDSLIVVTLDPKNKTMKMLSIPRDT
CHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEECCCCC
RVQLAGDTTGSKTKINAAYSKGGKDETVETVENFLQIPIDKYVTVDFDGFKDVINEVGGI
EEEEECCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCC
DVDVPFDFDEKSDVDESKRIYFKKGEMHLNGEEALAYARMRKQDKRGDFGRNDRQKQILN
EEECCCCCCCCCCCCCCCEEEEECCCEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALIDRMSSASNIAKIDKIAEKASENVETNIRITEGLALQQIYSGFTSKKIDTLSITGSDL
HHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCHHCCCCEEEEEECCEE
YLGPNNTYYFEPDATNLEKVRKTLQEHLDYTPDTSTGTSGTEDGTDSSSSSGSTGSTGTT
EECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDGTTNGSSYSNDSSTSSNNSTTNSTTDSSY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377