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The map label for this gene is yviA

Identifier: 16080601

GI number: 16080601

Start: 3643664

End: 3644509

Strand: Reverse

Name: yviA

Synonym: BSU35480

Alternate gene names: 16080601

Gene position: 3644509-3643664 (Counterclockwise)

Preceding gene: 16080602

Following gene: 16080600

Centisome position: 86.45

GC content: 42.79

Gene sequence:

>846_bases
ATGAATATTGCAGTCGTAACAGACAGCACGGCATATATTCCGAAAGAAATGCGTGAACAACATCAGATACATATGATCCC
TCTCCAGGTTGTTTTTAGGGAGGAGACTTACCGTGAAGAAATTGAGTTGGACTGGAAAAGCTTTTATGAAGAAGTGAAAA
AACATAATGAGCTCCCGACGACTTCTCAGCCGCCAATCGGCGAGCTGGTTGCGTTGTATGAAGAGCTTGGCAAGTCTTAT
GATGCGGTTATCAGTATCCATCTTTCCAGCGGGATCAGCGGAACATTCAGCAGTGCAGCAGCGGCTGATTCGATGGTCGA
CAATATTGATGTGTATCCATTTGACTCAGAGATCAGCTGCTTGGCTCAAGGCTTTTATGCCCTTAAAGCTGCTGAATTAA
TCAAAAACGGAGCATCATCGCCGGAAGATATTATAAAAGAACTGGAAGAAATGAAAAAAACAGTTCGAGCTTATTTTATG
GTAGATGACTTAGCCCATCTTCAGCGCGGCGGGCGATTAAGCAGCGCCCAAGCCTTCATTGGTAGTCTTCTAAAGGTAAA
GCCTATCCTTCATTTTGACAATAAGGTAATTGTGCCTTTTGAGAAGATTCGCACACGTAAAAAAGCAATTTCGCGAATTT
ATGAGCTTTTAGACGAAGATGCGAGTAAAGGGTTGCCTATGCGAGCTGCTGTTATCCACGCTAATCGAGAGGAAGAAGCA
GCGAAAATCATTGAAGAGCTTTCTGCAAAATATCCTCATGTTGAATTTTATAACAGCTATTTTGGCGCGGTAATCGGCAC
TCATTTGGGTGAAGGTGCGTTAGGAATTTGCTGGTGTTTTAAATAA

Upstream 100 bases:

>100_bases
TAGTATAATAGGAGACTTGCCTTTTACTAGGCAGGTCTTTTTTTAGGCTGCCGTTTCCCTTACAATAGAGTTATAAAGCA
ATAAGGCAGGTATCGAAGCT

Downstream 100 bases:

>100_bases
GGCCAAATCTCCGTTTTTAGAGCGGAGATTTTTTTATATTCTTATTTTAATAGTTGGACAGAAAATATTCATTCAGGCAT
ACTGTTTCGAAAGGAGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNIAVVTDSTAYIPKEMREQHQIHMIPLQVVFREETYREEIELDWKSFYEEVKKHNELPTTSQPPIGELVALYEELGKSY
DAVISIHLSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELIKNGASSPEDIIKELEEMKKTVRAYFM
VDDLAHLQRGGRLSSAQAFIGSLLKVKPILHFDNKVIVPFEKIRTRKKAISRIYELLDEDASKGLPMRAAVIHANREEEA
AKIIEELSAKYPHVEFYNSYFGAVIGTHLGEGALGICWCFK

Sequences:

>Translated_281_residues
MNIAVVTDSTAYIPKEMREQHQIHMIPLQVVFREETYREEIELDWKSFYEEVKKHNELPTTSQPPIGELVALYEELGKSY
DAVISIHLSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELIKNGASSPEDIIKELEEMKKTVRAYFM
VDDLAHLQRGGRLSSAQAFIGSLLKVKPILHFDNKVIVPFEKIRTRKKAISRIYELLDEDASKGLPMRAAVIHANREEEA
AKIIEELSAKYPHVEFYNSYFGAVIGTHLGEGALGICWCFK
>Mature_281_residues
MNIAVVTDSTAYIPKEMREQHQIHMIPLQVVFREETYREEIELDWKSFYEEVKKHNELPTTSQPPIGELVALYEELGKSY
DAVISIHLSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELIKNGASSPEDIIKELEEMKKTVRAYFM
VDDLAHLQRGGRLSSAQAFIGSLLKVKPILHFDNKVIVPFEKIRTRKKAISRIYELLDEDASKGLPMRAAVIHANREEEA
AKIIEELSAKYPHVEFYNSYFGAVIGTHLGEGALGICWCFK

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEGV_BACSU (P32436)

Other databases:

- EMBL:   Z18629
- EMBL:   U56901
- EMBL:   AL009126
- EMBL:   M23558
- PIR:   I40386
- RefSeq:   NP_391428.1
- PDB:   3FYS
- PDBsum:   3FYS
- ProteinModelPortal:   P32436
- SMR:   P32436
- EnsemblBacteria:   EBBACT00000003872
- GeneID:   936763
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35480
- NMPDR:   fig|224308.1.peg.3554
- GenoList:   BSU35480
- GeneTree:   EBGT00050000001604
- HOGENOM:   HBG729520
- OMA:   SANDYTH
- ProtClustDB:   CLSK2393404
- BioCyc:   BSUB:BSU35480-MONOMER
- InterPro:   IPR003797
- TIGRFAMs:   TIGR00762

Pfam domain/function: PF02645 DegV

EC number: NA

Molecular weight: Translated: 31580; Mature: 31580

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS51482 DEGV

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAVVTDSTAYIPKEMREQHQIHMIPLQVVFREETYREEIELDWKSFYEEVKKHNELPT
CEEEEEECCCHHCCHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
TSQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMVDNIDVYPFDSEISC
CCCCCHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHH
LAQGFYALKAAELIKNGASSPEDIIKELEEMKKTVRAYFMVDDLAHLQRGGRLSSAQAFI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GSLLKVKPILHFDNKVIVPFEKIRTRKKAISRIYELLDEDASKGLPMRAAVIHANREEEA
HHHHHHHHHEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEECCCHHHH
AKIIEELSAKYPHVEFYNSYFGAVIGTHLGEGALGICWCFK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MNIAVVTDSTAYIPKEMREQHQIHMIPLQVVFREETYREEIELDWKSFYEEVKKHNELPT
CEEEEEECCCHHCCHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
TSQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMVDNIDVYPFDSEISC
CCCCCHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHH
LAQGFYALKAAELIKNGASSPEDIIKELEEMKKTVRAYFMVDDLAHLQRGGRLSSAQAFI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GSLLKVKPILHFDNKVIVPFEKIRTRKKAISRIYELLDEDASKGLPMRAAVIHANREEEA
HHHHHHHHHEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEECCCHHHH
AKIIEELSAKYPHVEFYNSYFGAVIGTHLGEGALGICWCFK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 9384377; 3141378