| Definition | Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome. |
|---|---|
| Accession | NC_000964 |
| Length | 4,215,606 |
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The map label for this gene is yvcS
Identifier: 16080522
GI number: 16080522
Start: 3563581
End: 3565521
Strand: Reverse
Name: yvcS
Synonym: BSU34690
Alternate gene names: 16080522
Gene position: 3565521-3563581 (Counterclockwise)
Preceding gene: 16080523
Following gene: 16080520
Centisome position: 84.58
GC content: 41.16
Gene sequence:
>1941_bases ATGAATTTGAGAACTATCGCCCGTAAAAACATTCTTGGGAATCTGCAACGGTATGTGGCCTACTTTTTAAGCTGTGTGTT TGCCGTTTCGGTGTTTTTTGTCTTCACATCATTTATTTTTCATCCTGATGTCAATGAAGACAATATATATGGAGGAAGCC TTGTCAAAACATGCTTGAGCGCAGCTCTTGTCGTCATCATTGTGTTTTGTATATTTTTCATCACATATTCCAATTCAGCG TTTTTGCAGGCAAGAAAGAAAGAGTTTGGGCTGCTGACACTGTTTGGCACATCAAAGCAGCAGCTTCGCAAGATGATTTA TTATGAGCAGTCACTTATTTCTCTTGCGGCGATTGCGGCCGGCATTGGAGCAGGCCTGTTATTTTCAAAACTGTTTTTTA TGATCATGACATGGATGCTCAGCGTGAAGGTGCCGATTTCGTTTGCCATTGTGCCGAAAGCGTTTGTGATGACAATTGCC GGCTTTCTCATCCTGTTTCAGACGCTGCTCATTTTATCACTGGGACGGATTCGGAAGCTGGAAATCATTGAACTGATTAA ATCAGCCAAAAAGCCGAAAAGTTTGCCAGTTTATTCGAAATGGCTCACTGTATTGTCTTTGCTATGTCTTGGCAGCGGTT ATTATCTATCTGCAACAGCCAATGCAATTGACATGATGTTTCGGGTTTTTCCAATTTTGATTTTAGTGTTAATTGGCACG TATTTCTTTTTTACCCAAAGCAGTGTGGCATTTTTCCGCATGCTGTACCGAAAGAAACACAGCTTCTACAAAGGCACAAA TATCATTGTGCGTTCCAACATGATATTCAGGCTGAAGGATCATGCACGCATGCTGTTTTTAACCTCTGTCATTACAGCGG TCATACTAACAGCTACAGGTGTCATCTATATGTTTTATTCCGATTTACAAAGGCAGGAGGAGCAAAGCATTCCTCAGTCT GTTTCCTGGGTGGAAAAGGATGCTTCCCGCTTTCAGGTCATGAAGCCTGAGACGGCTGAGAATACATTGAAAAAAGCTCA TGCTGTTATCACGTATAAGGTGGATGCCACAGGGATTCCTGTCACTTTTCAGTCAGACTTGCCGTATGGAAATAAGAAGA TGGAAGCTGAAGCTTTGCTGATTTCAGAAAAAGTCTATAATCAAGTCGCAAAGGAAAAAGGGTTCCCAGTTATTCATTTA CAAGAAAATGAAGCATTTATTAATGTTTCTTTTCAAATGATGGTGAAAGACACATTTGGAGAAGGGGAAACAGCAGCATT TCATATGAAGTCAGGAAAAACCCTTTCCTATGTCATGAAAAAGCAGCAAAACAAAGGGATATTGATGTCTGTCGATGGAG TCAGCCGTTTATTGGTTGTCAGCGAAAAGAGCTTTGACAGTCTGTCACAGGATGTGCCGCTGAAGGAACAGATGAGAATG GTAGGTTATGAGCTTGAGCATTGGCAGGAGACGGTGGATGTCTCTGAAAAGCTTGAAAACATGGTGCCGAAAGAACATAC ATCTGATTTTCAAACACGTGCTCCTAGTTATCAAATTGTGAAGCAGGGAGTTGCATTAATGCTGTTTATTGGTCTGTTTG TCAGCGTGCTGTTTTTTATCGTGCAAGGAAGCATGCTGTATTTGCGGATGTTTACGGAAATAGAAGATACGGGAGTGCAG GTGTTAGCGTTAAAGAGGATAGGGGTTACGGACAAAGAGATTCACTCGATCCTTGGAAAGCAAATAGGATTTTTATTCTT CATCCCATTTATCGCAGGTACGATTCACGCGGGCTTTGCGTATGCAGCGTTAAGTAATATGCTGAATTCCAATTTATTTC TTGAGGCCGTAATTGTCATCTTCATTTATTTTGTATTCCAGGCTCTTTATTATATCGTCACCCGTCATATTTATAAGCGT GCTGTTCTTCAGCGTATGTAA
Upstream 100 bases:
>100_bases AAAGACGGACGTTTCTTTTCAGAGATTCACAGAGGAACAAACAGGCAGGTGTTTTATCAAAGTATATTGGATACCTTGAG TGTGTTGGGAGGCGATTTTC
Downstream 100 bases:
>100_bases TATGAAATCCGGTCTGTTATCAGACCGGATTTTTGATTTATTGAAATTCTCTTGTAAGATTTTTCGGTGTTTGCCCTTGG ATCGCTGCGAGCATATTTTC
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 646; Mature: 646
Protein sequence:
>646_residues MNLRTIARKNILGNLQRYVAYFLSCVFAVSVFFVFTSFIFHPDVNEDNIYGGSLVKTCLSAALVVIIVFCIFFITYSNSA FLQARKKEFGLLTLFGTSKQQLRKMIYYEQSLISLAAIAAGIGAGLLFSKLFFMIMTWMLSVKVPISFAIVPKAFVMTIA GFLILFQTLLILSLGRIRKLEIIELIKSAKKPKSLPVYSKWLTVLSLLCLGSGYYLSATANAIDMMFRVFPILILVLIGT YFFFTQSSVAFFRMLYRKKHSFYKGTNIIVRSNMIFRLKDHARMLFLTSVITAVILTATGVIYMFYSDLQRQEEQSIPQS VSWVEKDASRFQVMKPETAENTLKKAHAVITYKVDATGIPVTFQSDLPYGNKKMEAEALLISEKVYNQVAKEKGFPVIHL QENEAFINVSFQMMVKDTFGEGETAAFHMKSGKTLSYVMKKQQNKGILMSVDGVSRLLVVSEKSFDSLSQDVPLKEQMRM VGYELEHWQETVDVSEKLENMVPKEHTSDFQTRAPSYQIVKQGVALMLFIGLFVSVLFFIVQGSMLYLRMFTEIEDTGVQ VLALKRIGVTDKEIHSILGKQIGFLFFIPFIAGTIHAGFAYAALSNMLNSNLFLEAVIVIFIYFVFQALYYIVTRHIYKR AVLQRM
Sequences:
>Translated_646_residues MNLRTIARKNILGNLQRYVAYFLSCVFAVSVFFVFTSFIFHPDVNEDNIYGGSLVKTCLSAALVVIIVFCIFFITYSNSA FLQARKKEFGLLTLFGTSKQQLRKMIYYEQSLISLAAIAAGIGAGLLFSKLFFMIMTWMLSVKVPISFAIVPKAFVMTIA GFLILFQTLLILSLGRIRKLEIIELIKSAKKPKSLPVYSKWLTVLSLLCLGSGYYLSATANAIDMMFRVFPILILVLIGT YFFFTQSSVAFFRMLYRKKHSFYKGTNIIVRSNMIFRLKDHARMLFLTSVITAVILTATGVIYMFYSDLQRQEEQSIPQS VSWVEKDASRFQVMKPETAENTLKKAHAVITYKVDATGIPVTFQSDLPYGNKKMEAEALLISEKVYNQVAKEKGFPVIHL QENEAFINVSFQMMVKDTFGEGETAAFHMKSGKTLSYVMKKQQNKGILMSVDGVSRLLVVSEKSFDSLSQDVPLKEQMRM VGYELEHWQETVDVSEKLENMVPKEHTSDFQTRAPSYQIVKQGVALMLFIGLFVSVLFFIVQGSMLYLRMFTEIEDTGVQ VLALKRIGVTDKEIHSILGKQIGFLFFIPFIAGTIHAGFAYAALSNMLNSNLFLEAVIVIFIYFVFQALYYIVTRHIYKR AVLQRM >Mature_646_residues MNLRTIARKNILGNLQRYVAYFLSCVFAVSVFFVFTSFIFHPDVNEDNIYGGSLVKTCLSAALVVIIVFCIFFITYSNSA FLQARKKEFGLLTLFGTSKQQLRKMIYYEQSLISLAAIAAGIGAGLLFSKLFFMIMTWMLSVKVPISFAIVPKAFVMTIA GFLILFQTLLILSLGRIRKLEIIELIKSAKKPKSLPVYSKWLTVLSLLCLGSGYYLSATANAIDMMFRVFPILILVLIGT YFFFTQSSVAFFRMLYRKKHSFYKGTNIIVRSNMIFRLKDHARMLFLTSVITAVILTATGVIYMFYSDLQRQEEQSIPQS VSWVEKDASRFQVMKPETAENTLKKAHAVITYKVDATGIPVTFQSDLPYGNKKMEAEALLISEKVYNQVAKEKGFPVIHL QENEAFINVSFQMMVKDTFGEGETAAFHMKSGKTLSYVMKKQQNKGILMSVDGVSRLLVVSEKSFDSLSQDVPLKEQMRM VGYELEHWQETVDVSEKLENMVPKEHTSDFQTRAPSYQIVKQGVALMLFIGLFVSVLFFIVQGSMLYLRMFTEIEDTGVQ VLALKRIGVTDKEIHSILGKQIGFLFFIPFIAGTIHAGFAYAALSNMLNSNLFLEAVIVIFIYFVFQALYYIVTRHIYKR AVLQRM
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YVCS_BACSU (O06981)
Other databases:
- EMBL: Z94043 - EMBL: AL009126 - PIR: G70032 - RefSeq: NP_391349.1 - ProteinModelPortal: O06981 - EnsemblBacteria: EBBACT00000000369 - GeneID: 938473 - GenomeReviews: AL009126_GR - KEGG: bsu:BSU34690 - NMPDR: fig|224308.1.peg.3475 - GenoList: BSU34690 - GeneTree: EBGT00070000031788 - HOGENOM: HBG339962 - OMA: INGQKQS - ProtClustDB: CLSK247701 - BioCyc: BSUB:BSU34690-MONOMER - GO: GO:0006810 - InterPro: IPR003838
Pfam domain/function: PF02687 FtsX
EC number: NA
Molecular weight: Translated: 73399; Mature: 73399
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x40c1027c)-; HASH(0x40c15f7c)-; HASH(0x126023e8)-; HASH(0x1170bcfc)-; HASH(0x10af6b28)-; HASH(0xcb2960c)-; HASH(0x11acb7fc)-; HASH(0x107f4cfc)-; HASH(0x128b24d8)-; HASH(0x40c1fe7c)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRTIARKNILGNLQRYVAYFLSCVFAVSVFFVFTSFIFHPDVNEDNIYGGSLVKTCLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH AALVVIIVFCIFFITYSNSAFLQARKKEFGLLTLFGTSKQQLRKMIYYEQSLISLAAIAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH GIGAGLLFSKLFFMIMTWMLSVKVPISFAIVPKAFVMTIAGFLILFQTLLILSLGRIRKL HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH EIIELIKSAKKPKSLPVYSKWLTVLSLLCLGSGYYLSATANAIDMMFRVFPILILVLIGT HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH YFFFTQSSVAFFRMLYRKKHSFYKGTNIIVRSNMIFRLKDHARMLFLTSVITAVILTATG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHH VIYMFYSDLQRQEEQSIPQSVSWVEKDASRFQVMKPETAENTLKKAHAVITYKVDATGIP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEECCCHHHHHHHHHHEEEEEEEECCCCC VTFQSDLPYGNKKMEAEALLISEKVYNQVAKEKGFPVIHLQENEAFINVSFQMMVKDTFG EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEEEEECCCC EGETAAFHMKSGKTLSYVMKKQQNKGILMSVDGVSRLLVVSEKSFDSLSQDVPLKEQMRM CCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCHHEEEEEECCCHHHHHCCCCHHHHHHH VGYELEHWQETVDVSEKLENMVPKEHTSDFQTRAPSYQIVKQGVALMLFIGLFVSVLFFI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VQGSMLYLRMFTEIEDTGVQVLALKRIGVTDKEIHSILGKQIGFLFFIPFIAGTIHAGFA HHCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAALSNMLNSNLFLEAVIVIFIYFVFQALYYIVTRHIYKRAVLQRM HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MNLRTIARKNILGNLQRYVAYFLSCVFAVSVFFVFTSFIFHPDVNEDNIYGGSLVKTCLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH AALVVIIVFCIFFITYSNSAFLQARKKEFGLLTLFGTSKQQLRKMIYYEQSLISLAAIAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH GIGAGLLFSKLFFMIMTWMLSVKVPISFAIVPKAFVMTIAGFLILFQTLLILSLGRIRKL HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH EIIELIKSAKKPKSLPVYSKWLTVLSLLCLGSGYYLSATANAIDMMFRVFPILILVLIGT HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH YFFFTQSSVAFFRMLYRKKHSFYKGTNIIVRSNMIFRLKDHARMLFLTSVITAVILTATG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHH VIYMFYSDLQRQEEQSIPQSVSWVEKDASRFQVMKPETAENTLKKAHAVITYKVDATGIP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEECCCHHHHHHHHHHEEEEEEEECCCCC VTFQSDLPYGNKKMEAEALLISEKVYNQVAKEKGFPVIHLQENEAFINVSFQMMVKDTFG EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEEEEECCCC EGETAAFHMKSGKTLSYVMKKQQNKGILMSVDGVSRLLVVSEKSFDSLSQDVPLKEQMRM CCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCHHEEEEEECCCHHHHHCCCCHHHHHHH VGYELEHWQETVDVSEKLENMVPKEHTSDFQTRAPSYQIVKQGVALMLFIGLFVSVLFFI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VQGSMLYLRMFTEIEDTGVQVLALKRIGVTDKEIHSILGKQIGFLFFIPFIAGTIHAGFA HHCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAALSNMLNSNLFLEAVIVIFIYFVFQALYYIVTRHIYKRAVLQRM HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377