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The map label for this gene is yvdA

Identifier: 16080520

GI number: 16080520

Start: 3561590

End: 3562183

Strand: Reverse

Name: yvdA

Synonym: BSU34670

Alternate gene names: 16080520

Gene position: 3562183-3561590 (Counterclockwise)

Preceding gene: 16080522

Following gene: 16080519

Centisome position: 84.5

GC content: 44.78

Gene sequence:

>594_bases
ATGAATCAAATGGTTTCTTTAACATCAATTTTGGAACACAATCAGCGGTTTGTCAGTGAGAAGAAGTATGAACCGTACAA
AACGACAAAGTTTCCTTCGAAAAAGCTCGTCATTGTCACCTGTATGGATACAAGGCTTACAGAACTTCTTCCGCAAGCAA
TGGGGCTTAAAAACGGTGATGCTAAAATTGTAAAAAACGCGGGAGCCATCGTTTCTCACCCATTTGGAAGCGTGATGCGA
AGCATACTGGTCGCGATTTATGAATTGCAGGCTGAAGAGGTATGCATTGTCGGCCATCATGAATGCGGAATGTCAGGGCT
GAATGCGTCCTCGATTCTTGAGAAAGCAAAGGAACGCGGGGTGGAGGATAGCTGCCTGAATTTGCTGACGAGTGCCGGAC
TCGATTTGAAAACGTGGCTGACTGGTTTTCACAGCGTGGAAGAAAGCGTTTCCCACAGTGTGAACATGATTAAGAACCAT
CCGCTGCTTCCGAAAAAAGTGCCGGTTCACGGGCTTGTCATTCACCCTGAAACAGGAAAACTTGATGTGGTCATTAACGG
TTATGAAACTGAGCTTATAAACAATCACTCATAA

Upstream 100 bases:

>100_bases
ATAGTGTCTTTTTTTGAAAACCTTTTCTTGGCTTATTCCTATGCTATAATTCCTTACTGTAAGCTGGGTAAGAAGGCTTG
CAAAATCATATGGATGGGAG

Downstream 100 bases:

>100_bases
GGGAGGTTATAACAAAATATGCGATTCTCAGGGAGATTCAAGGGATACAATTTGCAGAAATTTCAGAAAGACTTGATTGC
AGGTATCGTAGTAGGTGTCG

Product: carbonic anhydrase

Products: NA

Alternate protein names: Carbonate dehydratase

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNQMVSLTSILEHNQRFVSEKKYEPYKTTKFPSKKLVIVTCMDTRLTELLPQAMGLKNGDAKIVKNAGAIVSHPFGSVMR
SILVAIYELQAEEVCIVGHHECGMSGLNASSILEKAKERGVEDSCLNLLTSAGLDLKTWLTGFHSVEESVSHSVNMIKNH
PLLPKKVPVHGLVIHPETGKLDVVINGYETELINNHS

Sequences:

>Translated_197_residues
MNQMVSLTSILEHNQRFVSEKKYEPYKTTKFPSKKLVIVTCMDTRLTELLPQAMGLKNGDAKIVKNAGAIVSHPFGSVMR
SILVAIYELQAEEVCIVGHHECGMSGLNASSILEKAKERGVEDSCLNLLTSAGLDLKTWLTGFHSVEESVSHSVNMIKNH
PLLPKKVPVHGLVIHPETGKLDVVINGYETELINNHS
>Mature_197_residues
MNQMVSLTSILEHNQRFVSEKKYEPYKTTKFPSKKLVIVTCMDTRLTELLPQAMGLKNGDAKIVKNAGAIVSHPFGSVMR
SILVAIYELQAEEVCIVGHHECGMSGLNASSILEKAKERGVEDSCLNLLTSAGLDLKTWLTGFHSVEESVSHSVNMIKNH
PLLPKKVPVHGLVIHPETGKLDVVINGYETELINNHS

Specific function: Reversible hydration of carbon dioxide

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVDA_BACSU (O06983)

Other databases:

- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   A70033
- RefSeq:   NP_391347.1
- ProteinModelPortal:   O06983
- SMR:   O06983
- EnsemblBacteria:   EBBACT00000002969
- GeneID:   937999
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34670
- NMPDR:   fig|224308.1.peg.3473
- GenoList:   BSU34670
- GeneTree:   EBGT00050000002389
- HOGENOM:   HBG373081
- OMA:   MGENAKP
- ProtClustDB:   CLSK2518276
- BioCyc:   BSUB:BSU34670-MONOMER
- InterPro:   IPR001765
- Gene3D:   G3DSA:3.40.1050.10
- SMART:   SM00947

Pfam domain/function: PF00484 Pro_CA; SSF53056 Prok_plnt_COanhd

EC number: =4.2.1.1

Molecular weight: Translated: 21715; Mature: 21715

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1; PS00705 PROK_CO2_ANHYDRASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQMVSLTSILEHNQRFVSEKKYEPYKTTKFPSKKLVIVTCMDTRLTELLPQAMGLKNGD
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCC
AKIVKNAGAIVSHPFGSVMRSILVAIYELQAEEVCIVGHHECGMSGLNASSILEKAKERG
HHEEECCCCCEECCHHHHHHHHHHHHHHHCCCCEEEEECHHCCCCCCCHHHHHHHHHHCC
VEDSCLNLLTSAGLDLKTWLTGFHSVEESVSHSVNMIKNHPLLPKKVPVHGLVIHPETGK
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC
LDVVINGYETELINNHS
EEEEEECCEECCCCCCC
>Mature Secondary Structure
MNQMVSLTSILEHNQRFVSEKKYEPYKTTKFPSKKLVIVTCMDTRLTELLPQAMGLKNGD
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCC
AKIVKNAGAIVSHPFGSVMRSILVAIYELQAEEVCIVGHHECGMSGLNASSILEKAKERG
HHEEECCCCCEECCHHHHHHHHHHHHHHHCCCCEEEEECHHCCCCCCCHHHHHHHHHHCC
VEDSCLNLLTSAGLDLKTWLTGFHSVEESVSHSVNMIKNHPLLPKKVPVHGLVIHPETGK
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC
LDVVINGYETELINNHS
EEEEEECCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377