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The map label for this gene is yvqJ

Identifier: 16080367

GI number: 16080367

Start: 3399092

End: 3400360

Strand: Reverse

Name: yvqJ

Synonym: BSU33140

Alternate gene names: 16080367

Gene position: 3400360-3399092 (Counterclockwise)

Preceding gene: 255767756

Following gene: 16080366

Centisome position: 80.66

GC content: 45.0

Gene sequence:

>1269_bases
ATGGTGAATTTAATTGAAAGTGATAGCATCTGGAAGAGAAATTTCAATTATCTGTTTTTCTCAAGAATAGTCAAGATATC
CGGCGATATGTTCGCATTTAATTCAATATTATGGTTTTTAATTTATGACGGCAAAGGTGCGATCGGCACTGCTTTATTGA
TTGCTGTCACGTTTTTGCCGGAAGCCGTTCTGGCGCCTGTGACGGGGCCTTTTATGAAACAGACCACGCTGAAATTTTGG
ATGTACTTTTCAGATCTGACAAGGGCGGCGATTGTTTTGATTATCCCTCTATGTCATTTTGCGGGCTTCTCTCCGCTGTG
GTTTGTCATGACGCTTATGATTGTGCATTCAGCTACTGGAGCTGCCTACAATCCCGCCTCTATCGCTTTGATTCCTCAAA
TCGTCAATGAACAGGGCATTCAAAAAGCAAACGCTGTGCTGCAATCCTCCGCTCAAATTGTCCGGCTTGGGGCTGTCACA
TTATGCGGCGCTTTTCTTACATTTATTAGTCCTTCTTATACCATGCTTATCGCACTTGTGCTCTATTTGGTGTCAGGTTT
TCTCGTTCTTTTTATTAAGTACACTGCGGTTGAATCTCAATCAGAGTCTGCGGTTGTTACACAGAGAGGCACATATATCG
GAAGACTGAAACGCGGCTTTAGGCTCGTCAGAAAACACCAGATTTTATATCCGCTCGCCATTTACTGTATCTTTATGAAT
TTCGCGGCTGCCCCATGGGAAGCGCTCTCTGCCGTATACGTTGCGGAAGATTTAAACGGCCAGCCGATCGTATACTCGCT
TTTAAAGGCCACCACCGCCGCGGGCGCGTTTTTATTAGGGTTTGTGCTGGCGAAAGTCAAGGTAAACAGGTACGGCTTGT
TATTCGTCACTGCCGGCATTATTGAAGGATTTGCTTTCTTTATTACCGGGATGAATACCTTTTTGCCGCTCGTCTTTTTC
GCTGCTTTTACCTTTGGTGCCGCAGTCAGTGCTGTTAATGTTCCTGAGTACACGATTATCCAGACGTCTGTGGATAGTGA
GGATCAGCCGCAGGTTTACGCCGTTATACATATGATCTCAAATATTTCGATCCCTGCCGGAGCTGTCATTTGCGGGTATG
CCGCTAATGCTTTCGGCTCAGGTAAAGTGATCGCTGTCGGTGGGATTGTCGAAATTATTGCGGGTATCGGAATCTTGCTG
TTTACAAAATTGGCCAAAGCAGAAAGGTCCGACCTAATTAAAGAAAGGGAAGCAAGTGTTCATCTGTAA

Upstream 100 bases:

>100_bases
ACGACAAAAAATGAACCTTATGAATTATTGACTGAAAAATGGAAAAATGAGATATTGTAATAAATAGATGTAAAAAATAG
GCAACGGGGGGCTCTGATGG

Downstream 100 bases:

>100_bases
AGGGTTTTAAAACGCCATGCCTCGTGCATGGCGTTTTTTTGTGCCAATGGGTCCGGTGCGAGATACGACTCCGGTCTTAT
ATAAAAATCAATCTCTGATT

Product: efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MVNLIESDSIWKRNFNYLFFSRIVKISGDMFAFNSILWFLIYDGKGAIGTALLIAVTFLPEAVLAPVTGPFMKQTTLKFW
MYFSDLTRAAIVLIIPLCHFAGFSPLWFVMTLMIVHSATGAAYNPASIALIPQIVNEQGIQKANAVLQSSAQIVRLGAVT
LCGAFLTFISPSYTMLIALVLYLVSGFLVLFIKYTAVESQSESAVVTQRGTYIGRLKRGFRLVRKHQILYPLAIYCIFMN
FAAAPWEALSAVYVAEDLNGQPIVYSLLKATTAAGAFLLGFVLAKVKVNRYGLLFVTAGIIEGFAFFITGMNTFLPLVFF
AAFTFGAAVSAVNVPEYTIIQTSVDSEDQPQVYAVIHMISNISIPAGAVICGYAANAFGSGKVIAVGGIVEIIAGIGILL
FTKLAKAERSDLIKEREASVHL

Sequences:

>Translated_422_residues
MVNLIESDSIWKRNFNYLFFSRIVKISGDMFAFNSILWFLIYDGKGAIGTALLIAVTFLPEAVLAPVTGPFMKQTTLKFW
MYFSDLTRAAIVLIIPLCHFAGFSPLWFVMTLMIVHSATGAAYNPASIALIPQIVNEQGIQKANAVLQSSAQIVRLGAVT
LCGAFLTFISPSYTMLIALVLYLVSGFLVLFIKYTAVESQSESAVVTQRGTYIGRLKRGFRLVRKHQILYPLAIYCIFMN
FAAAPWEALSAVYVAEDLNGQPIVYSLLKATTAAGAFLLGFVLAKVKVNRYGLLFVTAGIIEGFAFFITGMNTFLPLVFF
AAFTFGAAVSAVNVPEYTIIQTSVDSEDQPQVYAVIHMISNISIPAGAVICGYAANAFGSGKVIAVGGIVEIIAGIGILL
FTKLAKAERSDLIKEREASVHL
>Mature_422_residues
MVNLIESDSIWKRNFNYLFFSRIVKISGDMFAFNSILWFLIYDGKGAIGTALLIAVTFLPEAVLAPVTGPFMKQTTLKFW
MYFSDLTRAAIVLIIPLCHFAGFSPLWFVMTLMIVHSATGAAYNPASIALIPQIVNEQGIQKANAVLQSSAQIVRLGAVT
LCGAFLTFISPSYTMLIALVLYLVSGFLVLFIKYTAVESQSESAVVTQRGTYIGRLKRGFRLVRKHQILYPLAIYCIFMN
FAAAPWEALSAVYVAEDLNGQPIVYSLLKATTAAGAFLLGFVLAKVKVNRYGLLFVTAGIIEGFAFFITGMNTFLPLVFF
AAFTFGAAVSAVNVPEYTIIQTSVDSEDQPQVYAVIHMISNISIPAGAVICGYAANAFGSGKVIAVGGIVEIIAGIGILL
FTKLAKAERSDLIKEREASVHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVQJ_BACSU (O32203)

Other databases:

- EMBL:   AJ223978
- EMBL:   AL009126
- PIR:   C70046
- RefSeq:   NP_391194.1
- ProteinModelPortal:   O32203
- EnsemblBacteria:   EBBACT00000002017
- GeneID:   935970
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33140
- NMPDR:   fig|224308.1.peg.3320
- GenoList:   BSU33140
- GeneTree:   EBGT00070000031756
- HOGENOM:   HBG338309
- OMA:   WEALSAV
- ProtClustDB:   CLSK887860
- BioCyc:   BSUB:BSU33140-MONOMER
- InterPro:   IPR011701
- InterPro:   IPR016196

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 45897; Mature: 45897

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1233d91c)-; HASH(0x1185fe48)-; HASH(0x1211560c)-; HASH(0x11d6baac)-; HASH(0x1226b764)-; HASH(0x1200af60)-; HASH(0x11f38268)-; HASH(0x12534f5c)-; HASH(0x10bf9764)-; HASH(0x124967c0)-; HASH(0x127151e8)-; HASH(0x121d3c38)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLIESDSIWKRNFNYLFFSRIVKISGDMFAFNSILWFLIYDGKGAIGTALLIAVTFLP
CCCCCCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHH
EAVLAPVTGPFMKQTTLKFWMYFSDLTRAAIVLIIPLCHFAGFSPLWFVMTLMIVHSATG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
AAYNPASIALIPQIVNEQGIQKANAVLQSSAQIVRLGAVTLCGAFLTFISPSYTMLIALV
CCCCCCHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LYLVSGFLVLFIKYTAVESQSESAVVTQRGTYIGRLKRGFRLVRKHQILYPLAIYCIFMN
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAAAPWEALSAVYVAEDLNGQPIVYSLLKATTAAGAFLLGFVLAKVKVNRYGLLFVTAGI
HCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IEGFAFFITGMNTFLPLVFFAAFTFGAAVSAVNVPEYTIIQTSVDSEDQPQVYAVIHMIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHH
NISIPAGAVICGYAANAFGSGKVIAVGGIVEIIAGIGILLFTKLAKAERSDLIKEREASV
CCCCCCCCEEECHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HL
CH
>Mature Secondary Structure
MVNLIESDSIWKRNFNYLFFSRIVKISGDMFAFNSILWFLIYDGKGAIGTALLIAVTFLP
CCCCCCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHH
EAVLAPVTGPFMKQTTLKFWMYFSDLTRAAIVLIIPLCHFAGFSPLWFVMTLMIVHSATG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
AAYNPASIALIPQIVNEQGIQKANAVLQSSAQIVRLGAVTLCGAFLTFISPSYTMLIALV
CCCCCCHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LYLVSGFLVLFIKYTAVESQSESAVVTQRGTYIGRLKRGFRLVRKHQILYPLAIYCIFMN
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAAAPWEALSAVYVAEDLNGQPIVYSLLKATTAAGAFLLGFVLAKVKVNRYGLLFVTAGI
HCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IEGFAFFITGMNTFLPLVFFAAFTFGAAVSAVNVPEYTIIQTSVDSEDQPQVYAVIHMIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHH
NISIPAGAVICGYAANAFGSGKVIAVGGIVEIIAGIGILLFTKLAKAERSDLIKEREASV
CCCCCCCCEEECHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HL
CH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377