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The map label for this gene is liaI

Identifier: 16080366

GI number: 16080366

Start: 3398550

End: 3398930

Strand: Reverse

Name: liaI

Synonym: BSU33130

Alternate gene names: 16080366

Gene position: 3398930-3398550 (Counterclockwise)

Preceding gene: 16080367

Following gene: 16080365

Centisome position: 80.63

GC content: 45.41

Gene sequence:

>381_bases
ATGAAAATAAACAAGAAAACAATAGGCGGATTCTTATTAATTGTATTTGGGATCTCCGTCTTTTTTGGAGGAGGAAGCTT
CGGCTTTATCATCCCGCTCGCCATCGGGAGCTTGATGACATACGCAGGAATCAAAAGGTTTGCCGCGGGAAAAACCATCA
CGGGAATCATCGTGGGCGGTATCGGAGCCATTATGCTCATCTGCTCACTTCCGTTTGTCGTCGGAATCGCATTGGCGGCC
GCTATGGTGTATTACGGCTGGAAGCTGATGAAAAACGGATCAGCTGATAACGGTGTATCATCTTTTGATCCTGAACCGGC
TTCTGCTGCCTACCAATCTCACTTTGATGACGAATGGGAAGAATTTTTGAAGAAAAAATAA

Upstream 100 bases:

>100_bases
GATACGACTCCGGTCTTATATAAAAATCAATCTCTGATTCGTTTTGCATATCTTCCAACTTGTATAAGATGAAGACAAGG
AAAACGAAAGGAGGATCTGC

Downstream 100 bases:

>100_bases
TATCAATATATTAGGAGGAATCAGGTATGGTATTAAAAAGAATCAGAGACATGTTTGTTGCGTCAGTTCATGAAGGACTT
GATAAAATGGAGAATCCAAA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKINKKTIGGFLLIVFGISVFFGGGSFGFIIPLAIGSLMTYAGIKRFAAGKTITGIIVGGIGAIMLICSLPFVVGIALAA
AMVYYGWKLMKNGSADNGVSSFDPEPASAAYQSHFDDEWEEFLKKK

Sequences:

>Translated_126_residues
MKINKKTIGGFLLIVFGISVFFGGGSFGFIIPLAIGSLMTYAGIKRFAAGKTITGIIVGGIGAIMLICSLPFVVGIALAA
AMVYYGWKLMKNGSADNGVSSFDPEPASAAYQSHFDDEWEEFLKKK
>Mature_126_residues
MKINKKTIGGFLLIVFGISVFFGGGSFGFIIPLAIGSLMTYAGIKRFAAGKTITGIIVGGIGAIMLICSLPFVVGIALAA
AMVYYGWKLMKNGSADNGVSSFDPEPASAAYQSHFDDEWEEFLKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LIAI_BACSU (O32202)

Other databases:

- EMBL:   AJ223978
- EMBL:   AL009126
- PIR:   B70046
- RefSeq:   NP_391193.1
- EnsemblBacteria:   EBBACT00000002608
- GeneID:   935958
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33130
- NMPDR:   fig|224308.1.peg.3319
- GenoList:   BSU33130
- GeneTree:   EBGT00050000001486
- HOGENOM:   HBG345243
- OMA:   FFGGGHF
- ProtClustDB:   CLSK872958
- BioCyc:   BSUB:BSU33130-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13381; Mature: 13381

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12359264)-; HASH(0x11d4a1c4)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKKTIGGFLLIVFGISVFFGGGSFGFIIPLAIGSLMTYAGIKRFAAGKTITGIIVGG
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IGAIMLICSLPFVVGIALAAAMVYYGWKLMKNGSADNGVSSFDPEPASAAYQSHFDDEWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHH
EFLKKK
HHHHCH
>Mature Secondary Structure
MKINKKTIGGFLLIVFGISVFFGGGSFGFIIPLAIGSLMTYAGIKRFAAGKTITGIIVGG
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IGAIMLICSLPFVVGIALAAAMVYYGWKLMKNGSADNGVSSFDPEPASAAYQSHFDDEWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHH
EFLKKK
HHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695