Click here to switch to the map view.

The map label for this gene is yusW

Identifier: 16080347

GI number: 16080347

Start: 3380157

End: 3380594

Strand: Reverse

Name: yusW

Synonym: BSU32950

Alternate gene names: 16080347

Gene position: 3380594-3380157 (Counterclockwise)

Preceding gene: 50812291

Following gene: 16080346

Centisome position: 80.19

GC content: 45.66

Gene sequence:

>438_bases
ATGCATTTGATCAGAGCAGCCGGGGCTGTATGTCTCGCAGTGGTTCTGATTGCGGGCTGCCGTTTCAATGAAGACCAGCA
TCAGGCAGAAGGAGAAAATACAGCCGTCACCCAGCTGAAGTCCGTTCCCTACAGTAATTTTTCGCTTCGTGTGAGCTACG
GGGATGGTGAGCATAACCGTTATGAAGGAATCTATACAAAGAACGGGACTCAGGAAAAAGCGGAAATACAGGATAAGCTC
TCCGGTGTCAATCAGGAAGGAGAAGAAGCGTTAGATGAGATGAAAATGATTTTGAGCGAGCTTTCCGTGACAGACCAAAT
GGCTGAAACAGAAGTGATACACAGTGTGCTGGCAGCATTTAATCTGGACAGTCATTATGATCATATCGATTTAAAATTGA
AGCTGAAGGACGGCTCCATCAGAGAAATCAAGAAGTAA

Upstream 100 bases:

>100_bases
CGTGGCGTTAAATGCCCCGGCTTTTTCAATTCTTCTCTGAATGAGGATTTCATTCTCTGGATATACCTAAAATAAATGGA
ATCCTACAGGGGGGAAACAT

Downstream 100 bases:

>100_bases
TCTTGTGATAAAAAACCCATAAACGTCAATTATGTCCATAAAACTAATTGAAAATGATTTTCAAAGTCAGTGTTTTCTGC
TACAATGAGGGATATATGAC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MHLIRAAGAVCLAVVLIAGCRFNEDQHQAEGENTAVTQLKSVPYSNFSLRVSYGDGEHNRYEGIYTKNGTQEKAEIQDKL
SGVNQEGEEALDEMKMILSELSVTDQMAETEVIHSVLAAFNLDSHYDHIDLKLKLKDGSIREIKK

Sequences:

>Translated_145_residues
MHLIRAAGAVCLAVVLIAGCRFNEDQHQAEGENTAVTQLKSVPYSNFSLRVSYGDGEHNRYEGIYTKNGTQEKAEIQDKL
SGVNQEGEEALDEMKMILSELSVTDQMAETEVIHSVLAAFNLDSHYDHIDLKLKLKDGSIREIKK
>Mature_145_residues
MHLIRAAGAVCLAVVLIAGCRFNEDQHQAEGENTAVTQLKSVPYSNFSLRVSYGDGEHNRYEGIYTKNGTQEKAEIQDKL
SGVNQEGEEALDEMKMILSELSVTDQMAETEVIHSVLAAFNLDSHYDHIDLKLKLKDGSIREIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUSW_BACSU (O32189)

Other databases:

- EMBL:   AL009126
- PIR:   H70022
- RefSeq:   NP_391174.1
- ProteinModelPortal:   O32189
- EnsemblBacteria:   EBBACT00000000380
- GeneID:   938599
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32950
- NMPDR:   fig|224308.1.peg.3300
- GenoList:   BSU32950
- GeneTree:   EBGT00050000002106
- HOGENOM:   HBG338301
- OMA:   DADYQDT
- ProtClustDB:   CLSK887851
- BioCyc:   BSUB:BSU32950-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16152; Mature: 16152

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLIRAAGAVCLAVVLIAGCRFNEDQHQAEGENTAVTQLKSVPYSNFSLRVSYGDGEHNR
CCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCC
YEGIYTKNGTQEKAEIQDKLSGVNQEGEEALDEMKMILSELSVTDQMAETEVIHSVLAAF
CCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLDSHYDHIDLKLKLKDGSIREIKK
CCCCCCCEEEEEEEECCCCHHHHCC
>Mature Secondary Structure
MHLIRAAGAVCLAVVLIAGCRFNEDQHQAEGENTAVTQLKSVPYSNFSLRVSYGDGEHNR
CCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCC
YEGIYTKNGTQEKAEIQDKLSGVNQEGEEALDEMKMILSELSVTDQMAETEVIHSVLAAF
CCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLDSHYDHIDLKLKLKDGSIREIKK
CCCCCCCEEEEEEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377