Click here to switch to the map view.

The map label for this gene is yusU

Identifier: 16080345

GI number: 16080345

Start: 3378800

End: 3379087

Strand: Reverse

Name: yusU

Synonym: BSU32930

Alternate gene names: 16080345

Gene position: 3379087-3378800 (Counterclockwise)

Preceding gene: 16080346

Following gene: 16080343

Centisome position: 80.16

GC content: 42.01

Gene sequence:

>288_bases
TTGAGAAAGCTCCTTGCTGTTTTTTCGAAAGGAAGATGGAAAATGGAACAAAAACTTCAGGAGCAGCTTGATGGATTGCT
GGAGAAGTATACTGAGCTTCTGCTTGGTGAAACAAACGATGAGCTAAAAGAAGAAGTGAAGCAATGGATTTTGTACACCC
ATATAGCCAAAAGCATGCCTCCGCTCGCTAAGCATTGGAATGCGACATACCCCGACGCGAAGCAGGGCATTAAAGAGATC
ATTCAGCATATTAAGGAATTAAATGAAGCGCATCGAAACAAACAATAG

Upstream 100 bases:

>100_bases
CGGAACGCCTCTTTGCATTCCTCATGGCAGGGGCAGATGCATTGTCCAGGAAGCGGCTTTCACATCACATGGATAAATAA
CGCAGCGAAGGAGCTTTCAA

Downstream 100 bases:

>100_bases
CCAAAAAGCAGTCTGTTCATTATAGCAGACTGCTTTTTTGTGATTCAGCCGTTTTAACTGGCGTAAAGGAATCCATAAAG
GTTCTCAGCGCGCTGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MRKLLAVFSKGRWKMEQKLQEQLDGLLEKYTELLLGETNDELKEEVKQWILYTHIAKSMPPLAKHWNATYPDAKQGIKEI
IQHIKELNEAHRNKQ

Sequences:

>Translated_95_residues
MRKLLAVFSKGRWKMEQKLQEQLDGLLEKYTELLLGETNDELKEEVKQWILYTHIAKSMPPLAKHWNATYPDAKQGIKEI
IQHIKELNEAHRNKQ
>Mature_95_residues
MRKLLAVFSKGRWKMEQKLQEQLDGLLEKYTELLLGETNDELKEEVKQWILYTHIAKSMPPLAKHWNATYPDAKQGIKEI
IQHIKELNEAHRNKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUSU_BACSU (O32187)

Other databases:

- EMBL:   AL009126
- PIR:   F70022
- RefSeq:   NP_391172.1
- EnsemblBacteria:   EBBACT00000000270
- GeneID:   935925
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32930
- NMPDR:   fig|224308.1.peg.3298
- GenoList:   BSU32930
- GeneTree:   EBGT00050000001735
- HOGENOM:   HBG338300
- OMA:   HIAKSMP
- ProtClustDB:   CLSK873633
- BioCyc:   BSUB:BSU32930-MONOMER
- InterPro:   IPR020393
- ProDom:   PD065427

Pfam domain/function: PF10835 DUF2573

EC number: NA

Molecular weight: Translated: 11282; Mature: 11282

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLAVFSKGRWKMEQKLQEQLDGLLEKYTELLLGETNDELKEEVKQWILYTHIAKSMP
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
PLAKHWNATYPDAKQGIKEIIQHIKELNEAHRNKQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKLLAVFSKGRWKMEQKLQEQLDGLLEKYTELLLGETNDELKEEVKQWILYTHIAKSMP
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
PLAKHWNATYPDAKQGIKEIIQHIKELNEAHRNKQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377