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The map label for this gene is sufC

Identifier: 16080323

GI number: 16080323

Start: 3359995

End: 3360780

Strand: Reverse

Name: sufC

Synonym: BSU32710

Alternate gene names: 16080323

Gene position: 3360780-3359995 (Counterclockwise)

Preceding gene: 255767748

Following gene: 16080322

Centisome position: 79.72

GC content: 45.42

Gene sequence:

>786_bases
ATGGCTGCTTCAACATTAACGATCAAAGATCTTCACGTTGAAATCGAAGGGAAAGAGATCTTAAAGGGTGTAAACCTTGA
AATAAAAGGTGGAGAATTCCACGCAGTAATGGGCCCGAACGGAACTGGTAAATCCACTTTATCAGCTGCTATTATGGGGC
ATCCTAAATATGAAGTAACAAAAGGCAGCATCACGCTTGACGGCAAAGATGTACTGGAGATGGAAGTGGACGAGCGTGCG
CAGGCAGGCTTATTCCTTGCAATGCAGTACCCAAGTGAAATCAGCGGTGTGACAAATGCCGACTTCCTTCGCTCAGCAAT
CAACGCGCGCAGAGAAGAAGGCGATGAAATTTCTCTCATGAAATTCATCCGCAAAATGGACGAAAACATGGAGTTCCTTG
AAATGGACCCTGAAATGGCTCAGCGCTATCTTAACGAAGGCTTCTCAGGCGGGGAGAAAAAACGCAACGAAATCCTTCAA
TTAATGATGATTGAACCGAAAATCGCCATCCTTGATGAAATTGACTCAGGCCTTGATATTGACGCTTTGAAAGTTGTATC
AAAAGGGATCAACAAAATGCGCAGCGAAAACTTCGGCTGCCTGATGATCACTCACTATCAGCGCCTGTTAAACTACATCA
CTCCGGATGTTGTTCACGTTATGATGCAAGGCCGCGTTGTAAAATCCGGCGGTGCAGAGCTTGCACAGCGTCTTGAAGCA
GAAGGTTATGACTGGATCAAACAAGAACTTGGCATTGAAGACGAAACTGTTGGCCAAGAAGCGTAA

Upstream 100 bases:

>100_bases
TGCAAGGCACGATAAAAAGTTGTATTTACTTTTCATTTGTTATAAAATTAGAATGAGAATAAAATGAGAATAATGATTAT
ATATTTTTGGAGGTATAGAT

Downstream 100 bases:

>100_bases
GCGTTAGGGGGATTAATATGACACTAGGTACAAAACTATCCGTAGATCAGGAGTATCTCAAAAGCTTTTCCGAAAAGCAC
CAAGAACCTGCCTGGCTGAA

Product: sulfur mobilizing ABC protein, ATPase

Products: NA

Alternate protein names: VEG296

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MAASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVTKGSITLDGKDVLEMEVDERA
QAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRKMDENMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQ
LMMIEPKIAILDEIDSGLDIDALKVVSKGINKMRSENFGCLMITHYQRLLNYITPDVVHVMMQGRVVKSGGAELAQRLEA
EGYDWIKQELGIEDETVGQEA

Sequences:

>Translated_261_residues
MAASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVTKGSITLDGKDVLEMEVDERA
QAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRKMDENMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQ
LMMIEPKIAILDEIDSGLDIDALKVVSKGINKMRSENFGCLMITHYQRLLNYITPDVVHVMMQGRVVKSGGAELAQRLEA
EGYDWIKQELGIEDETVGQEA
>Mature_260_residues
AASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVTKGSITLDGKDVLEMEVDERAQ
AGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRKMDENMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQL
MMIEPKIAILDEIDSGLDIDALKVVSKGINKMRSENFGCLMITHYQRLLNYITPDVVHVMMQGRVVKSGGAELAQRLEAE
GYDWIKQELGIEDETVGQEA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain

Homologues:

Organism=Homo sapiens, GI9961252, Length=224, Percent_Identity=31.6964285714286, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI4505771, Length=224, Percent_Identity=31.6964285714286, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI42741659, Length=225, Percent_Identity=31.1111111111111, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI148612844, Length=217, Percent_Identity=30.4147465437788, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI255708477, Length=217, Percent_Identity=30.4147465437788, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI9961250, Length=231, Percent_Identity=30.7359307359307, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI42490749, Length=231, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI21536378, Length=226, Percent_Identity=28.3185840707965, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787972, Length=246, Percent_Identity=51.219512195122, Blast_Score=265, Evalue=2e-72,
Organism=Escherichia coli, GI1788761, Length=226, Percent_Identity=26.1061946902655, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1786698, Length=195, Percent_Identity=28.2051282051282, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787759, Length=249, Percent_Identity=29.3172690763052, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786654, Length=244, Percent_Identity=26.2295081967213, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789593, Length=227, Percent_Identity=25.9911894273128, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789891, Length=218, Percent_Identity=27.5229357798165, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786319, Length=195, Percent_Identity=27.6923076923077, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787500, Length=240, Percent_Identity=27.9166666666667, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=27.0386266094421, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789864, Length=243, Percent_Identity=27.1604938271605, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787143, Length=232, Percent_Identity=25.8620689655172, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87081709, Length=225, Percent_Identity=22.2222222222222, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=238, Percent_Identity=28.1512605042017, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71996809, Length=241, Percent_Identity=27.3858921161826, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17541710, Length=220, Percent_Identity=28.1818181818182, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17567269, Length=234, Percent_Identity=28.6324786324786, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI212646699, Length=245, Percent_Identity=27.7551020408163, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193211017, Length=241, Percent_Identity=26.9709543568465, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193211015, Length=241, Percent_Identity=26.9709543568465, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=235, Percent_Identity=28.936170212766, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17567265, Length=248, Percent_Identity=28.6290322580645, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115535101, Length=256, Percent_Identity=26.953125, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=236, Percent_Identity=27.5423728813559, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=231, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17543740, Length=237, Percent_Identity=27.0042194092827, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=223, Percent_Identity=26.9058295964126, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=222, Percent_Identity=25.6756756756757, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=220, Percent_Identity=26.8181818181818, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71984940, Length=251, Percent_Identity=29.0836653386454, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=215, Percent_Identity=26.5116279069767, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281363262, Length=220, Percent_Identity=32.7272727272727, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24653245, Length=220, Percent_Identity=32.7272727272727, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI85726357, Length=213, Percent_Identity=29.1079812206573, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24659289, Length=218, Percent_Identity=27.9816513761468, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): V296_BACSU (P80866)

Other databases:

- EMBL:   AL009126
- PIR:   H70019
- RefSeq:   NP_391150.1
- ProteinModelPortal:   P80866
- SMR:   P80866
- EnsemblBacteria:   EBBACT00000003489
- GeneID:   937073
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32710
- NMPDR:   fig|224308.1.peg.3276
- GenoList:   BSU32710
- GeneTree:   EBGT00050000000066
- HOGENOM:   HBG758042
- OMA:   ILRYIKP
- PhylomeDB:   P80866
- ProtClustDB:   CLSK2391283
- BioCyc:   BSUB:BSU32710-MONOMER
- GO:   GO:0006810
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230
- PANTHER:   PTHR19222:SF6
- SMART:   SM00382
- TIGRFAMs:   TIGR01978

Pfam domain/function: PF00005 ABC_tran

EC number: NA

Molecular weight: Translated: 29032; Mature: 28901

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVT
CCCCEEEEEEEEEEECCHHHHCCCCEEEECCEEEEEECCCCCCCHHHHHHHHCCCCEEEE
KGSITLDGKDVLEMEVDERAQAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLM
CCEEEECCCHHEEECHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCCHHHH
KFIRKMDENMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQLMMIEPKIAILDEIDSGLDI
HHHHHHCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCH
DALKVVSKGINKMRSENFGCLMITHYQRLLNYITPDVVHVMMQGRVVKSGGAELAQRLEA
HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCHHHHHHHHHCEEEECCCHHHHHHHHC
EGYDWIKQELGIEDETVGQEA
CCHHHHHHHCCCCCHHCCCCC
>Mature Secondary Structure 
AASTLTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVT
CCCEEEEEEEEEEECCHHHHCCCCEEEECCEEEEEECCCCCCCHHHHHHHHCCCCEEEE
KGSITLDGKDVLEMEVDERAQAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLM
CCEEEECCCHHEEECHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCCHHHH
KFIRKMDENMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQLMMIEPKIAILDEIDSGLDI
HHHHHHCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCH
DALKVVSKGINKMRSENFGCLMITHYQRLLNYITPDVVHVMMQGRVVKSGGAELAQRLEA
HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCHHHHHHHHHCEEEECCCHHHHHHHHC
EGYDWIKQELGIEDETVGQEA
CCHHHHHHHCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659