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The map label for this gene is yurR

Identifier: 16080316

GI number: 16080316

Start: 3352789

End: 3353907

Strand: Reverse

Name: yurR

Synonym: BSU32630

Alternate gene names: 16080316

Gene position: 3353907-3352789 (Counterclockwise)

Preceding gene: 16080318

Following gene: 16080315

Centisome position: 79.56

GC content: 52.37

Gene sequence:

>1119_bases
ATGAAATCGTACATCATCGTCGGCGCAGGGATTCTGGGCGCGTCGACGGCTTATCATCTCGCAAAAACAGGCGCTCGCGT
TACTGTCATTGATCGGAAAGAGCCGGGACAAGCGACTGATGCGGCGGCGGGGATCGTCTGTCCTTGGCTCTCGCAGCGCC
GTAATCAGGATTGGTACCAGCTTGCTAAGGGGGGAGCGCGGTACTATAAGGATTTAATCCATCAATTGGAAAAAGACGGT
GAATCGGATACAGGATACAAACGTGTCGGTGCCATCAGCATTCATACTGACGCGTCTAAACTCGATAAAATGGAGGAAAG
GGCGTATAAGAGACGGGAGGATGCGCCGGAAATCGGCGACATTACCCGCTTGTCTGCAAGTGAAACGAAAAAGCTGTTTC
CGATTTTAGCTGACGGCTATGAATCGGTTCATATCAGCGGTGCCGCCCGTGTGAACGGAAGAGCGCTGTGCCGGTCGCTT
TTAAGCGCTGCAGAGAAACGCGGCGCAACGGTCATCAAAGGAAATGCGTCCTTGCTTTTTGAAAACGGAACAGTCACCGG
CGTGCAAACAGATACAAAGCAGTTTGCGGCTGACGCGGTCATTGTGACGGCGGGAGCATGGGCCAATGAGATATTGAAGC
CTCTTGGCATTCATTTTCAAGTGTCATTTCAAAAAGCGCAGATTATGCATTTTGAAATGACAGATGCAGATACAGGATCG
TGGCCGGTTGTAATGCCGCCGAGTGATCAGTACATTCTGTCGTTTGATAACGGCAGAATTGTAGCCGGCGCCACACACGA
AAACGATGCCGGTCTTGATGATCTTCGTGTGACAGCCGGAGGCCAGCACGAAGTATTGAGCAAAGCGTTAGCCGTTGCAC
CGGGTCTTGCTGATGCGGCTGCTGTTGAAACAAGAGTGGGCTTCAGGCCGTTTACACCGGGATTTCTGCCGGTCGTAGGG
GCCGTGCCGAATGTTCAAGGCCTGTACGCTGCAAACGGTTTGGGTGCTTCTGGACTGACGATGGGGCCGTTTTTGGGTGC
AGAGCTCGCAAAGCTAGTTCTCGGAAAGCAGACAGAATTAGACCTTAGTCCTTATGATCCAGCCGGAGCACTTGCATAA

Upstream 100 bases:

>100_bases
GGACGAACTTCGCGGTTTTTCCACATTAGGGCAAAAGGTCGAAGGAAAGCATTTGATTTGGTAAAATGAATAGACATTAT
AATAGAAAAGGTGTTTGCAT

Downstream 100 bases:

>100_bases
TAAGTAAGAGCATGACAAACAAATATAATAAAGCTGTTCTAGCTTTTCTTTTCTGTATGTGTTAGCATTTATCTTTAATG
AAAAAGAGGACGTGAACTGA

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKSYIIVGAGILGASTAYHLAKTGARVTVIDRKEPGQATDAAAGIVCPWLSQRRNQDWYQLAKGGARYYKDLIHQLEKDG
ESDTGYKRVGAISIHTDASKLDKMEERAYKRREDAPEIGDITRLSASETKKLFPILADGYESVHISGAARVNGRALCRSL
LSAAEKRGATVIKGNASLLFENGTVTGVQTDTKQFAADAVIVTAGAWANEILKPLGIHFQVSFQKAQIMHFEMTDADTGS
WPVVMPPSDQYILSFDNGRIVAGATHENDAGLDDLRVTAGGQHEVLSKALAVAPGLADAAAVETRVGFRPFTPGFLPVVG
AVPNVQGLYAANGLGASGLTMGPFLGAELAKLVLGKQTELDLSPYDPAGALA

Sequences:

>Translated_372_residues
MKSYIIVGAGILGASTAYHLAKTGARVTVIDRKEPGQATDAAAGIVCPWLSQRRNQDWYQLAKGGARYYKDLIHQLEKDG
ESDTGYKRVGAISIHTDASKLDKMEERAYKRREDAPEIGDITRLSASETKKLFPILADGYESVHISGAARVNGRALCRSL
LSAAEKRGATVIKGNASLLFENGTVTGVQTDTKQFAADAVIVTAGAWANEILKPLGIHFQVSFQKAQIMHFEMTDADTGS
WPVVMPPSDQYILSFDNGRIVAGATHENDAGLDDLRVTAGGQHEVLSKALAVAPGLADAAAVETRVGFRPFTPGFLPVVG
AVPNVQGLYAANGLGASGLTMGPFLGAELAKLVLGKQTELDLSPYDPAGALA
>Mature_372_residues
MKSYIIVGAGILGASTAYHLAKTGARVTVIDRKEPGQATDAAAGIVCPWLSQRRNQDWYQLAKGGARYYKDLIHQLEKDG
ESDTGYKRVGAISIHTDASKLDKMEERAYKRREDAPEIGDITRLSASETKKLFPILADGYESVHISGAARVNGRALCRSL
LSAAEKRGATVIKGNASLLFENGTVTGVQTDTKQFAADAVIVTAGAWANEILKPLGIHFQVSFQKAQIMHFEMTDADTGS
WPVVMPPSDQYILSFDNGRIVAGATHENDAGLDDLRVTAGGQHEVLSKALAVAPGLADAAAVETRVGFRPFTPGFLPVVG
AVPNVQGLYAANGLGASGLTMGPFLGAELAKLVLGKQTELDLSPYDPAGALA

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Homo sapiens, GI197927446, Length=388, Percent_Identity=25.2577319587629, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI21361378, Length=388, Percent_Identity=25.2577319587629, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI194306651, Length=391, Percent_Identity=26.3427109974425, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI20130091, Length=384, Percent_Identity=25.5208333333333, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YURR_BACSU (O32159)

Other databases:

- EMBL:   AL009126
- PIR:   A70019
- RefSeq:   NP_391143.1
- ProteinModelPortal:   O32159
- EnsemblBacteria:   EBBACT00000003068
- GeneID:   937069
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32630
- NMPDR:   fig|224308.1.peg.3269
- GenoList:   BSU32630
- GeneTree:   EBGT00050000001490
- HOGENOM:   HBG729204
- OMA:   FTPGFLP
- ProtClustDB:   CLSK2752506
- BioCyc:   BSUB:BSU32630-MONOMER
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: NA

Molecular weight: Translated: 39450; Mature: 39450

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSYIIVGAGILGASTAYHLAKTGARVTVIDRKEPGQATDAAAGIVCPWLSQRRNQDWYQ
CCCEEEEECCHHHCHHHHHHHHCCCEEEEEECCCCCCCHHHHCCEECCHHHHHCCCHHHH
LAKGGARYYKDLIHQLEKDGESDTGYKRVGAISIHTDASKLDKMEERAYKRREDAPEIGD
HHHCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCC
ITRLSASETKKLFPILADGYESVHISGAARVNGRALCRSLLSAAEKRGATVIKGNASLLF
EEECCHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEE
ENGTVTGVQTDTKQFAADAVIVTAGAWANEILKPLGIHFQVSFQKAQIMHFEMTDADTGS
ECCEEEEEECCHHHHHCCEEEEECCCCHHHHHHHHCCEEEEEEEEEEEEEEEECCCCCCC
WPVVMPPSDQYILSFDNGRIVAGATHENDAGLDDLRVTAGGQHEVLSKALAVAPGLADAA
CEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHH
AVETRVGFRPFTPGFLPVVGAVPNVQGLYAANGLGASGLTMGPFLGAELAKLVLGKQTEL
HHHHHCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCC
DLSPYDPAGALA
CCCCCCCCCCCC
>Mature Secondary Structure
MKSYIIVGAGILGASTAYHLAKTGARVTVIDRKEPGQATDAAAGIVCPWLSQRRNQDWYQ
CCCEEEEECCHHHCHHHHHHHHCCCEEEEEECCCCCCCHHHHCCEECCHHHHHCCCHHHH
LAKGGARYYKDLIHQLEKDGESDTGYKRVGAISIHTDASKLDKMEERAYKRREDAPEIGD
HHHCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCC
ITRLSASETKKLFPILADGYESVHISGAARVNGRALCRSLLSAAEKRGATVIKGNASLLF
EEECCHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEE
ENGTVTGVQTDTKQFAADAVIVTAGAWANEILKPLGIHFQVSFQKAQIMHFEMTDADTGS
ECCEEEEEECCHHHHHCCEEEEECCCCHHHHHHHHCCEEEEEEEEEEEEEEEECCCCCCC
WPVVMPPSDQYILSFDNGRIVAGATHENDAGLDDLRVTAGGQHEVLSKALAVAPGLADAA
CEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHH
AVETRVGFRPFTPGFLPVVGAVPNVQGLYAANGLGASGLTMGPFLGAELAKLVLGKQTEL
HHHHHCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCC
DLSPYDPAGALA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377