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The map label for this gene is yulD

Identifier: 16080171

GI number: 16080171

Start: 3199233

End: 3199547

Strand: Reverse

Name: yulD

Synonym: BSU31190

Alternate gene names: 16080171

Gene position: 3199547-3199233 (Counterclockwise)

Preceding gene: 16080172

Following gene: 16080170

Centisome position: 75.9

GC content: 40.32

Gene sequence:

>315_bases
TTGAAAAGAAAAGCCAGTATCATGTTTGTCCATCAAGACAAGTACGAAGAATACAAACAGCGGCATGATGACATTTGGCC
TGAGATGGCAGAAGCACTCAAAGCTCATGGAGCACACCATTATTCCATTTTTCTAGACGAGGAAACAGGCAGGCTTTTTG
CATATTTAGAAATAGAGGATGAAGAGAAATGGAGAAAGATGGCGGACACGGAAGTTTGCCAAAGATGGTGGAAATCGATG
GCGCCATTAATGAAAACAAATTCGGATTTCAGTCCTGTTGCGATAGATCTAAAGGAAGTTTTTTATTTGGATTGA

Upstream 100 bases:

>100_bases
AAGTGTTTACACCTAAAGACATTGATAGAAGCACGATCATTCAGTCATTTCAGCAAACTGTTTTGAAAGCGCTATCTAAA
TGATGAAGAGGTGAAAAGGT

Downstream 100 bases:

>100_bases
AAAACTGATAAAGGGAGAGAGCCGTATGACCATAAAAGCCAATTATGACAGTGCAAAACAGGCATATGAAAAATGGGGAA
TTGATGTTGAAGAGGCGCTT

Product: L-rhamnose mutarotase

Products: NA

Alternate protein names: Rhamnose 1-epimerase; Type-3 mutarotase

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKRKASIMFVHQDKYEEYKQRHDDIWPEMAEALKAHGAHHYSIFLDEETGRLFAYLEIEDEEKWRKMADTEVCQRWWKSM
APLMKTNSDFSPVAIDLKEVFYLD

Sequences:

>Translated_104_residues
MKRKASIMFVHQDKYEEYKQRHDDIWPEMAEALKAHGAHHYSIFLDEETGRLFAYLEIEDEEKWRKMADTEVCQRWWKSM
APLMKTNSDFSPVAIDLKEVFYLD
>Mature_104_residues
MKRKASIMFVHQDKYEEYKQRHDDIWPEMAEALKAHGAHHYSIFLDEETGRLFAYLEIEDEEKWRKMADTEVCQRWWKSM
APLMKTNSDFSPVAIDLKEVFYLD

Specific function: Involved in the anomeric conversion of L-rhamnose

COG id: COG3254

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose mutarotase family

Homologues:

Organism=Escherichia coli, GI1790335, Length=103, Percent_Identity=55.3398058252427, Blast_Score=127, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RHAM_BACSU (O05263)

Other databases:

- EMBL:   Z93938
- EMBL:   AL009126
- PIR:   F70014
- RefSeq:   NP_390997.1
- HSSP:   P32156
- ProteinModelPortal:   O05263
- SMR:   O05263
- EnsemblBacteria:   EBBACT00000002085
- GeneID:   937151
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU31190
- NMPDR:   fig|224308.1.peg.3122
- GenoList:   BSU31190
- GeneTree:   EBGT00050000006107
- HOGENOM:   HBG649684
- OMA:   DEYEKRH
- PhylomeDB:   O05263
- ProtClustDB:   CLSK376993
- BioCyc:   BSUB:BSU31190-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01663
- InterPro:   IPR013448
- InterPro:   IPR008000
- TIGRFAMs:   TIGR02625

Pfam domain/function: PF05336 DUF718

EC number: NA

Molecular weight: Translated: 12575; Mature: 12575

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: ACT_SITE 22-22 BINDING 18-18 BINDING 41-41

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKASIMFVHQDKYEEYKQRHDDIWPEMAEALKAHGAHHYSIFLDEETGRLFAYLEIED
CCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCCEEEEEEEECC
EEKWRKMADTEVCQRWWKSMAPLMKTNSDFSPVAIDLKEVFYLD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHEECC
>Mature Secondary Structure
MKRKASIMFVHQDKYEEYKQRHDDIWPEMAEALKAHGAHHYSIFLDEETGRLFAYLEIED
CCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCCEEEEEEEECC
EEKWRKMADTEVCQRWWKSMAPLMKTNSDFSPVAIDLKEVFYLD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377