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The map label for this gene is ytcJ

Identifier: 16080007

GI number: 16080007

Start: 3022068

End: 3023657

Strand: Reverse

Name: ytcJ

Synonym: BSU29550

Alternate gene names: 16080007

Gene position: 3023657-3022068 (Counterclockwise)

Preceding gene: 255767678

Following gene: 16080005

Centisome position: 71.73

GC content: 48.99

Gene sequence:

>1590_bases
ATGAAGGCGATATGGCACGGCGGTTTCATTTATACGATGCTCGAAGAAGGCGATCGGACTGAGGCAGTTTATGTTGAGGA
TGGTGTTATAAAAGGCACCGGCAGCTATGAACGTTTGAAGGAAAAGTACGGGTCGCCGGAAACAGAAGAAATCAGCCTGA
ACGGAGCAGTGATGTTCCCCGGTTTTGTTGACAGCCATCTACATTTGATCGGCCACGGTGAGAAACAGCTTCAGCTCGAT
CTGTCCGCACTGACGTCGAAAGATTCAATTTTACAGGCTGCGAAGGAAAGAGAGCGGCAGCTTCCTAAAAACGATTGGCT
CATTGGAGAAGGCTGGAATGAAAATCAGTTTGAGACACCTGACTACTTGACTAAGCATGATCTTGATCGCCTGTTTCCTG
ACAGGCCCGTCTTGCTCAAGCGTATATGCCGGCATGCAATAGCTGTCAATTCTGCGGCTCTTCAAGCAGCGGGAATTTCA
AGAAATACTCCTGATCCTGACGGCGGAGTCATCGTAAAAGATGCAAATGGCGAGCCGACCGGACTCCTGTTTGATAAGGC
GCAGGATTTGATTCTGAAGGCTGTCCCGCCAGTCTCCCAGCACTATGTTGATGAGGCATTAACGGCTGCAATAAAGGATT
GCTGGACAAAAGGCCTGACGGGCGGTCATTCGGAAGACTTGTCCTATTATGGTGATGTTTCGGTGCCGATGAAAGCTTAT
GAGAAAGCTGCCGCTGGCGGAAAGTATCCGTTTCGCTGCCATTTGCTCGTTCATCATGAAGCTGTCGATCGATGGGAGCA
GCTGGAGAAGCTGTCCGGCCCGTATGTGGAGTTCGGTGCTATGAAAATCTTTGCGGACGGGGCGCTTGGCGGGAGAACGG
CTTTATTGAAAGAACCATATCAGGATGATCCATCAACAAATGGTGTTCAGGTTCACGATGACGAAACCCTTGGCCGGCTC
ATTCGCAAAGCGAGAGAAAAAGGGATGGAGGTTGCTGTTCATGCAATCGGCGATCTTGCTTTTGAAAAAGTGCTGAACGC
AATAGAAAAGCATCCGCCCAAAAACGGCCGGCATGATCGGCTTATTCATGCTCAAGTGCTTGATAACGAATTAATCGAGA
GAGCAGCACGCATGCCGATCGCACTTGACCTTCAGCCGCACTTCGTTGCAAGCGACTTTCCGTGGGTCATTGACCGTCTC
GGAAAAGACCGGATGAAGACTGCATTTGCCTGGAAAACCCTCATATCTAAAGGCATTTTATGCGCGGGCGGTTCAGACGC
CCCGATTGAGCCTGTTGACCCGCTTCTAGGGATCCAGTCCGCGGTCCTCCGGAAAAGCAGTCATGAGCAAAACGGGCCAA
GCTATAATGAAAGTGAATGTTTACCTGTATATGAAGCGATAAAGCTTTATACAGAAGGTAGCGCCGGTATCATTTATAAA
GAGAAGTCACGCGGAAAAATTGCGGAAGGCTATGACGCGGATTTTACAGTTCTCAGTGGTGATCCGTTTGCCATTGACCC
CGCACAGCTTCATCTTTTAGAGATTAAAAAAACCGTGATTAACGGCCAGATTGTATATGAGAAATCATAA

Upstream 100 bases:

>100_bases
CCGAAAACGGCTTCTGCAAAAATCAGACGAGTGGAATTAAGAAAACGTGAAGAACAGCTCAAAGCCAATAAAAAGGCGTA
AAGAAAGAGAGTGAACGTGA

Downstream 100 bases:

>100_bases
AAGGACAGGCAGCAGCCTGTCCTTTTATTTTCTATAAAAAAGTACGCTTCACTTTTTCCCAAAATGAATTGTCCTTTAGT
TTGACTGTTTTGATTTTCTT

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MKAIWHGGFIYTMLEEGDRTEAVYVEDGVIKGTGSYERLKEKYGSPETEEISLNGAVMFPGFVDSHLHLIGHGEKQLQLD
LSALTSKDSILQAAKERERQLPKNDWLIGEGWNENQFETPDYLTKHDLDRLFPDRPVLLKRICRHAIAVNSAALQAAGIS
RNTPDPDGGVIVKDANGEPTGLLFDKAQDLILKAVPPVSQHYVDEALTAAIKDCWTKGLTGGHSEDLSYYGDVSVPMKAY
EKAAAGGKYPFRCHLLVHHEAVDRWEQLEKLSGPYVEFGAMKIFADGALGGRTALLKEPYQDDPSTNGVQVHDDETLGRL
IRKAREKGMEVAVHAIGDLAFEKVLNAIEKHPPKNGRHDRLIHAQVLDNELIERAARMPIALDLQPHFVASDFPWVIDRL
GKDRMKTAFAWKTLISKGILCAGGSDAPIEPVDPLLGIQSAVLRKSSHEQNGPSYNESECLPVYEAIKLYTEGSAGIIYK
EKSRGKIAEGYDADFTVLSGDPFAIDPAQLHLLEIKKTVINGQIVYEKS

Sequences:

>Translated_529_residues
MKAIWHGGFIYTMLEEGDRTEAVYVEDGVIKGTGSYERLKEKYGSPETEEISLNGAVMFPGFVDSHLHLIGHGEKQLQLD
LSALTSKDSILQAAKERERQLPKNDWLIGEGWNENQFETPDYLTKHDLDRLFPDRPVLLKRICRHAIAVNSAALQAAGIS
RNTPDPDGGVIVKDANGEPTGLLFDKAQDLILKAVPPVSQHYVDEALTAAIKDCWTKGLTGGHSEDLSYYGDVSVPMKAY
EKAAAGGKYPFRCHLLVHHEAVDRWEQLEKLSGPYVEFGAMKIFADGALGGRTALLKEPYQDDPSTNGVQVHDDETLGRL
IRKAREKGMEVAVHAIGDLAFEKVLNAIEKHPPKNGRHDRLIHAQVLDNELIERAARMPIALDLQPHFVASDFPWVIDRL
GKDRMKTAFAWKTLISKGILCAGGSDAPIEPVDPLLGIQSAVLRKSSHEQNGPSYNESECLPVYEAIKLYTEGSAGIIYK
EKSRGKIAEGYDADFTVLSGDPFAIDPAQLHLLEIKKTVINGQIVYEKS
>Mature_529_residues
MKAIWHGGFIYTMLEEGDRTEAVYVEDGVIKGTGSYERLKEKYGSPETEEISLNGAVMFPGFVDSHLHLIGHGEKQLQLD
LSALTSKDSILQAAKERERQLPKNDWLIGEGWNENQFETPDYLTKHDLDRLFPDRPVLLKRICRHAIAVNSAALQAAGIS
RNTPDPDGGVIVKDANGEPTGLLFDKAQDLILKAVPPVSQHYVDEALTAAIKDCWTKGLTGGHSEDLSYYGDVSVPMKAY
EKAAAGGKYPFRCHLLVHHEAVDRWEQLEKLSGPYVEFGAMKIFADGALGGRTALLKEPYQDDPSTNGVQVHDDETLGRL
IRKAREKGMEVAVHAIGDLAFEKVLNAIEKHPPKNGRHDRLIHAQVLDNELIERAARMPIALDLQPHFVASDFPWVIDRL
GKDRMKTAFAWKTLISKGILCAGGSDAPIEPVDPLLGIQSAVLRKSSHEQNGPSYNESECLPVYEAIKLYTEGSAGIIYK
EKSRGKIAEGYDADFTVLSGDPFAIDPAQLHLLEIKKTVINGQIVYEKS

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTCJ_BACSU (O34355)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   F69989
- RefSeq:   NP_390833.1
- ProteinModelPortal:   O34355
- EnsemblBacteria:   EBBACT00000001685
- GeneID:   936723
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29550
- NMPDR:   fig|224308.1.peg.2958
- GenoList:   BSU29550
- GeneTree:   EBGT00050000002253
- HOGENOM:   HBG670532
- OMA:   AMKIFAD
- ProtClustDB:   CLSK873538
- BioCyc:   BSUB:BSU29550-MONOMER
- InterPro:   IPR013108
- InterPro:   IPR011059

Pfam domain/function: PF07969 Amidohydro_3; SSF51338 Metalo_hydrolase

EC number: NA

Molecular weight: Translated: 58477; Mature: 58477

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIWHGGFIYTMLEEGDRTEAVYVEDGVIKGTGSYERLKEKYGSPETEEISLNGAVMFP
CCCEEECCEEEEEECCCCCCCEEEEECCEEECCCCHHHHHHHCCCCCCCEEEECCEEEEC
GFVDSHLHLIGHGEKQLQLDLSALTSKDSILQAAKERERQLPKNDWLIGEGWNENQFETP
CHHCCCEEEEECCCHHEEEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
DYLTKHDLDRLFPDRPVLLKRICRHAIAVNSAALQAAGISRNTPDPDGGVIVKDANGEPT
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCEEEECCCCCCC
GLLFDKAQDLILKAVPPVSQHYVDEALTAAIKDCWTKGLTGGHSEDLSYYGDVSVPMKAY
EEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
EKAAAGGKYPFRCHLLVHHEAVDRWEQLEKLSGPYVEFGAMKIFADGALGGRTALLKEPY
HHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCCCHHHHCCCC
QDDPSTNGVQVHDDETLGRLIRKAREKGMEVAVHAIGDLAFEKVLNAIEKHPPKNGRHDR
CCCCCCCCEEEECHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LIHAQVLDNELIERAARMPIALDLQPHFVASDFPWVIDRLGKDRMKTAFAWKTLISKGIL
EEEHHHHHHHHHHHHHCCCEEEECCCCEECCCCHHHHHHHCHHHHHHHHHHHHHHHCCEE
CAGGSDAPIEPVDPLLGIQSAVLRKSSHEQNGPSYNESECLPVYEAIKLYTEGSAGIIYK
EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEEE
EKSRGKIAEGYDADFTVLSGDPFAIDPAQLHLLEIKKTVINGQIVYEKS
ECCCCCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHHHCCEEEEECC
>Mature Secondary Structure
MKAIWHGGFIYTMLEEGDRTEAVYVEDGVIKGTGSYERLKEKYGSPETEEISLNGAVMFP
CCCEEECCEEEEEECCCCCCCEEEEECCEEECCCCHHHHHHHCCCCCCCEEEECCEEEEC
GFVDSHLHLIGHGEKQLQLDLSALTSKDSILQAAKERERQLPKNDWLIGEGWNENQFETP
CHHCCCEEEEECCCHHEEEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
DYLTKHDLDRLFPDRPVLLKRICRHAIAVNSAALQAAGISRNTPDPDGGVIVKDANGEPT
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCEEEECCCCCCC
GLLFDKAQDLILKAVPPVSQHYVDEALTAAIKDCWTKGLTGGHSEDLSYYGDVSVPMKAY
EEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
EKAAAGGKYPFRCHLLVHHEAVDRWEQLEKLSGPYVEFGAMKIFADGALGGRTALLKEPY
HHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCCCHHHHCCCC
QDDPSTNGVQVHDDETLGRLIRKAREKGMEVAVHAIGDLAFEKVLNAIEKHPPKNGRHDR
CCCCCCCCEEEECHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LIHAQVLDNELIERAARMPIALDLQPHFVASDFPWVIDRLGKDRMKTAFAWKTLISKGIL
EEEHHHHHHHHHHHHHCCCEEEECCCCEECCCCHHHHHHHCHHHHHHHHHHHHHHHCCEE
CAGGSDAPIEPVDPLLGIQSAVLRKSSHEQNGPSYNESECLPVYEAIKLYTEGSAGIIYK
EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEEE
EKSRGKIAEGYDADFTVLSGDPFAIDPAQLHLLEIKKTVINGQIVYEKS
ECCCCCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377