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The map label for this gene is ytpI

Identifier: 16079978

GI number: 16079978

Start: 2996980

End: 2997282

Strand: Direct

Name: ytpI

Synonym: BSU29260

Alternate gene names: 16079978

Gene position: 2996980-2997282 (Clockwise)

Preceding gene: 255767676

Following gene: 16079992

Centisome position: 71.09

GC content: 42.24

Gene sequence:

>303_bases
ATGCTGGTTCTTGTTTTTTTGATTGGGCTTTCAGCCTGCTTTTATGTGTACTATAAAGTAAAAGGCGTACGGGCAAAGCC
ATCTTTGGCAAAAGAAATATGTTCAGCAAAATCAAGCATGGCCTTAGGGTCACTAGTCCTGTTCTACGGGCTTAACCAAA
TGATATTATTCCATTCAGTATTAACGTTAGTAATCGGCGGTATCTTTATCGTCATAGGAGCAGGAAGCGCTTGGGCAGGT
TATAAAGCCTTCAGGCATTACAATCCCCTTCACGCCAAAGAAGCTGAAAGAGATCACGCGTAA

Upstream 100 bases:

>100_bases
AATCACATTCTCTGCCGACGGAAAAGAAAAATAACGTCAAAACCAAGCCCGTTTTTGTATAAAATGGGGTTGTAAACTTT
TACGATGGAGGATTTCATTT

Downstream 100 bases:

>100_bases
GGGGCGCCTGAACGTCCCTTAGCTTCTTTCCATCAGCTGAACCATCAGCATCGCTTTAGACACGATATGACCTTGGCTGT
GCACTTCCACTTCCATTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MLVLVFLIGLSACFYVYYKVKGVRAKPSLAKEICSAKSSMALGSLVLFYGLNQMILFHSVLTLVIGGIFIVIGAGSAWAG
YKAFRHYNPLHAKEAERDHA

Sequences:

>Translated_100_residues
MLVLVFLIGLSACFYVYYKVKGVRAKPSLAKEICSAKSSMALGSLVLFYGLNQMILFHSVLTLVIGGIFIVIGAGSAWAG
YKAFRHYNPLHAKEAERDHA
>Mature_100_residues
MLVLVFLIGLSACFYVYYKVKGVRAKPSLAKEICSAKSSMALGSLVLFYGLNQMILFHSVLTLVIGGIFIVIGAGSAWAG
YKAFRHYNPLHAKEAERDHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTPI_BACSU (O34922)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   F69998
- RefSeq:   NP_390804.1
- EnsemblBacteria:   EBBACT00000002097
- GeneID:   937370
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29260
- NMPDR:   fig|224308.1.peg.2929
- GenoList:   BSU29260
- GeneTree:   EBGT00050000001162
- HOGENOM:   HBG339989
- OMA:   WAGYRAY
- ProtClustDB:   CLSK2393394
- BioCyc:   BSUB:BSU29260-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10953; Mature: 10953

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11ac1e40)-; HASH(0x119be424)-;

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLVFLIGLSACFYVYYKVKGVRAKPSLAKEICSAKSSMALGSLVLFYGLNQMILFHSV
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLVIGGIFIVIGAGSAWAGYKAFRHYNPLHAKEAERDHA
HHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCCCH
>Mature Secondary Structure
MLVLVFLIGLSACFYVYYKVKGVRAKPSLAKEICSAKSSMALGSLVLFYGLNQMILFHSV
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLVIGGIFIVIGAGSAWAGYKAFRHYNPLHAKEAERDHA
HHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377