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The map label for this gene is safA

Identifier: 16079836

GI number: 16079836

Start: 2844675

End: 2845838

Strand: Reverse

Name: safA

Synonym: BSU27840

Alternate gene names: 16079836

Gene position: 2845838-2844675 (Counterclockwise)

Preceding gene: 16079837

Following gene: 255767638

Centisome position: 67.51

GC content: 46.74

Gene sequence:

>1164_bases
TTGAAAATCCATATCGTTCAAAAAGGCGATTCGCTCTGGAAAATAGCTGAAAAGTACGGAGTCGATGTTGAGGAAGTGAA
AAAACTCAATACACAGCTTAGCAATCCAGACTTAATCATGCCTGGAATGAAAATAAAAGTGCCGTCAGAAGGAGTCCCGG
TCAGAAAAGAGCCAAAAGCGGGCAAAAGTCCTGCGGCCGGGAGTGTGAAGCAAGAACATCCATATGCGAAAGAGAAGCCT
AAATCCGTTGTCGATGTAGAAGACACAAAGCCGAAAGAAAAGAAGTCCATGCCGTATGTCCCGCCGATGCCTAATTTGCA
GGAAAATGTGTACCCTGAAGCTGATGTGAACGATTATTATGATATGAAACAGCTTTTCCAGCCTTGGTCGCCTCCTAAAC
CGGAGGAGCCGAAAAAACATCATGACGGAAATATGGATCATATGTATCATATGCAAGACCAATTTCCACAACAGGAGGCT
ATGAGTAATATGGAAAATGCAAATTATCCGAATATGCCTAATATGCCAAAGGCGCCAGAGGTAGGCGGTATAGAAGAGGA
AAACGTTCATCACACAGTTCCGAATATGCCGATGCCGGCTGTTCAGCCTTATTATCATTATCCGGCTCATTTCGTACCGT
GTCCGGTGCCTGTTTCGCCAATTCTTCCAGGATCAGGATTATGCTATCCGTACTATCCGGCACAAGCTTATCCAATGCAT
CCGATGCATGGATACCAGCCAGGCTTTGTATCGCCTCAGTATGACCCGGGTTATGAAAACCAGCATCATGAAAACAGCCA
TCACGGACATTACGGTTCATACGGTGCGCCGCAATACGCATCTCCGGCTTATGGATCTCCGTATGGACATATGCCGTATG
GCCCTTATTACGGCACTCCCCAAGTAATGGGAGCATACCAGCCTGCTGCGGCTCATGGTTACATGCCATACAAAGATCAT
GACGACTGCGGCTGTGACGGTGATCATCAGCCATATTTCTCTGCACCTGGCCATTCGGGAATGGGAGCTTATGGAAGCCC
TAATATGCCATATGGCACAGCTAACCCAAATCCAAACCCATATTCGGCAGGAGTTTCTATGCCAATGACGAACCAGCCTT
CTGTAAACCAAATGTTTGGCCGTCCGGAAGAAGAAAATGAGTGA

Upstream 100 bases:

>100_bases
CTTCCTTTACTCATAACTTCTTTTGTTCAGGCATATGTTGTGAAGAAACATATTGTAATCACAGCTGAACTGTTCACGTT
TTGCATAGGAGGGGAAAACG

Downstream 100 bases:

>100_bases
TCGTTCGGAACGATGTAAATCGTTCCTTTTTTTGTTTTCAAGCAGATCACTGCCAAATGGAGAGAACTGACACGCTTAAC
ATGCCCCCCATACGCACATG

Product: morphogenetic protein associated with SpoVID

Products: NA

Alternate protein names: Morphogenetic protein safA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MKIHIVQKGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKAGKSPAAGSVKQEHPYAKEKP
KSVVDVEDTKPKEKKSMPYVPPMPNLQENVYPEADVNDYYDMKQLFQPWSPPKPEEPKKHHDGNMDHMYHMQDQFPQQEA
MSNMENANYPNMPNMPKAPEVGGIEEENVHHTVPNMPMPAVQPYYHYPAHFVPCPVPVSPILPGSGLCYPYYPAQAYPMH
PMHGYQPGFVSPQYDPGYENQHHENSHHGHYGSYGAPQYASPAYGSPYGHMPYGPYYGTPQVMGAYQPAAAHGYMPYKDH
DDCGCDGDHQPYFSAPGHSGMGAYGSPNMPYGTANPNPNPYSAGVSMPMTNQPSVNQMFGRPEEENE

Sequences:

>Translated_387_residues
MKIHIVQKGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKAGKSPAAGSVKQEHPYAKEKP
KSVVDVEDTKPKEKKSMPYVPPMPNLQENVYPEADVNDYYDMKQLFQPWSPPKPEEPKKHHDGNMDHMYHMQDQFPQQEA
MSNMENANYPNMPNMPKAPEVGGIEEENVHHTVPNMPMPAVQPYYHYPAHFVPCPVPVSPILPGSGLCYPYYPAQAYPMH
PMHGYQPGFVSPQYDPGYENQHHENSHHGHYGSYGAPQYASPAYGSPYGHMPYGPYYGTPQVMGAYQPAAAHGYMPYKDH
DDCGCDGDHQPYFSAPGHSGMGAYGSPNMPYGTANPNPNPYSAGVSMPMTNQPSVNQMFGRPEEENE
>Mature_387_residues
MKIHIVQKGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKAGKSPAAGSVKQEHPYAKEKP
KSVVDVEDTKPKEKKSMPYVPPMPNLQENVYPEADVNDYYDMKQLFQPWSPPKPEEPKKHHDGNMDHMYHMQDQFPQQEA
MSNMENANYPNMPNMPKAPEVGGIEEENVHHTVPNMPMPAVQPYYHYPAHFVPCPVPVSPILPGSGLCYPYYPAQAYPMH
PMHGYQPGFVSPQYDPGYENQHHENSHHGHYGSYGAPQYASPAYGSPYGHMPYGPYYGTPQVMGAYQPAAAHGYMPYKDH
DDCGCDGDHQPYFSAPGHSGMGAYGSPNMPYGTANPNPNPYSAGVSMPMTNQPSVNQMFGRPEEENE

Specific function: Probably involved in the assembly of some coat protein components implicated in both lysozyme resistance and germination. Could be required for the assembly of CotG. Associates with SpoIVD during the early stage of coat assembly

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore cortex. Note=At the coat- cortex interface

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SAFA_BACSU (O32062)

Other databases:

- EMBL:   Y15896
- EMBL:   D50551
- EMBL:   AL009126
- PIR:   H69971
- RefSeq:   NP_390662.1
- ProteinModelPortal:   O32062
- SMR:   O32062
- EnsemblBacteria:   EBBACT00000002957
- GeneID:   937514
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27840
- NMPDR:   fig|224308.1.peg.2787
- GenoList:   BSU27840
- GeneTree:   EBGT00050000000195
- HOGENOM:   HBG345157
- OMA:   MENANYP
- ProtClustDB:   CLSK887678
- BioCyc:   BSUB:BSU27840-MONOMER
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR014248
- SMART:   SM00257
- TIGRFAMs:   TIGR02899

Pfam domain/function: PF01476 LysM

EC number: NA

Molecular weight: Translated: 43230; Mature: 43230

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHIVQKGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKA
CEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCCCC
GKSPAAGSVKQEHPYAKEKPKSVVDVEDTKPKEKKSMPYVPPMPNLQENVYPEADVNDYY
CCCCCCCCCHHHCCCHHHCCCCEECCCCCCCHHHCCCCCCCCCCCHHHHCCCCCCCHHHH
DMKQLFQPWSPPKPEEPKKHHDGNMDHMYHMQDQFPQQEAMSNMENANYPNMPNMPKAPE
HHHHHHCCCCCCCCCCCHHHCCCCHHHEECCHHHCCHHHHHHHHCCCCCCCCCCCCCCCC
VGGIEEENVHHTVPNMPMPAVQPYYHYPAHFVPCPVPVSPILPGSGLCYPYYPAQAYPMH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PMHGYQPGFVSPQYDPGYENQHHENSHHGHYGSYGAPQYASPAYGSPYGHMPYGPYYGTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
QVMGAYQPAAAHGYMPYKDHDDCGCDGDHQPYFSAPGHSGMGAYGSPNMPYGTANPNPNP
HHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YSAGVSMPMTNQPSVNQMFGRPEEENE
CCCCCCCCCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MKIHIVQKGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSEGVPVRKEPKA
CEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCCCC
GKSPAAGSVKQEHPYAKEKPKSVVDVEDTKPKEKKSMPYVPPMPNLQENVYPEADVNDYY
CCCCCCCCCHHHCCCHHHCCCCEECCCCCCCHHHCCCCCCCCCCCHHHHCCCCCCCHHHH
DMKQLFQPWSPPKPEEPKKHHDGNMDHMYHMQDQFPQQEAMSNMENANYPNMPNMPKAPE
HHHHHHCCCCCCCCCCCHHHCCCCHHHEECCHHHCCHHHHHHHHCCCCCCCCCCCCCCCC
VGGIEEENVHHTVPNMPMPAVQPYYHYPAHFVPCPVPVSPILPGSGLCYPYYPAQAYPMH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PMHGYQPGFVSPQYDPGYENQHHENSHHGHYGSYGAPQYASPAYGSPYGHMPYGPYYGTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
QVMGAYQPAAAHGYMPYKDHDDCGCDGDHQPYFSAPGHSGMGAYGSPNMPYGTANPNPNP
HHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YSAGVSMPMTNQPSVNQMFGRPEEENE
CCCCCCCCCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9770294; 9384377