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The map label for this gene is yrhO

Identifier: 16079765

GI number: 16079765

Start: 2768827

End: 2769654

Strand: Direct

Name: yrhO

Synonym: BSU27110

Alternate gene names: 16079765

Gene position: 2768827-2769654 (Clockwise)

Preceding gene: 255767625

Following gene: 16079766

Centisome position: 65.68

GC content: 40.22

Gene sequence:

>828_bases
ATGAAAGAAAATATGTTAGACATTTTAAAAAACCTCAATTTTACAGAATATGAATCGAAAGCGTATTTAGCATTATTGCA
AGAATCACCTTTAACAGGCTATGCCGTTGCCAAAAAATCCGGAGTGCCCCGTTCTAAAATTTATGAAGTATTGGAAAGTC
TTGTCATAAGGGGAGATGTTTTTGTCAGTCATGGAAATACGCCTCAGTATGTTCCAGTCCCCGCAAAAGAACTGATTAAA
AACCGCCGGCTCAAAGCGGAAGAGCATTTTGATCAGGCTGAGAAATATTTTGAAAAGTTCGAGCAGACCGCAAATGACCG
GGAAAACATCTGGAATATCACCGGCCGCAGTGAAATTCTTGAAAAGGTGAAGGCTTGTATCTTATCTGCCAAAAAAAGAA
TCCTCTTAGAAATATGGAAAGAGGATTTTAAGGAGATAGAAGCAGAGCTCAAACAGGCGGCAGAACAAGGCGTTATTGTC
ACCATTATTGCGTACGGAGACATCGTATCTGATTTTGCCAATGTTTACCTTCATGATATGAGCAGTGAAATTACAGAAGA
GTATGACGGACGGTGGCTTGTCTATAGCGGAGATGATTCAGAAGTAGTAGCGGGCATTGTCTCACTTGGCAACGACAGCC
GTGCTGCATGGACGATGCATGTAGGGTTAGTCATGCCTATTACTGAAGTGATCATTCATGATCTGTACCTCATGGAAATT
CTGAAAAAGCATAGAGAGCTTTTAGAAGAGAGCTTCGGGAAAAATCTCATCCAGTTGCGCCGTAAATTTTCTATTCACTC
AGATTTCAAAAAACATTATTTGGAATAA

Upstream 100 bases:

>100_bases
ACTACTTATAAAAGTGTATCAATGCGTTTGGAATAAATCAATATGATTTGTTAAAATAGCGATTACTAAGGCAGCGATTG
CTCTTTATATTGGAGGATAT

Downstream 100 bases:

>100_bases
TGTTTGTCATCTCTTACCCCAAAAACAAGGCTTGTACAAAACAAGCCTTGTTTTTTTATGCATAAACCCCCCATGCTGAT
TTACTTCTCTCTTTTAAAAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKENMLDILKNLNFTEYESKAYLALLQESPLTGYAVAKKSGVPRSKIYEVLESLVIRGDVFVSHGNTPQYVPVPAKELIK
NRRLKAEEHFDQAEKYFEKFEQTANDRENIWNITGRSEILEKVKACILSAKKRILLEIWKEDFKEIEAELKQAAEQGVIV
TIIAYGDIVSDFANVYLHDMSSEITEEYDGRWLVYSGDDSEVVAGIVSLGNDSRAAWTMHVGLVMPITEVIIHDLYLMEI
LKKHRELLEESFGKNLIQLRRKFSIHSDFKKHYLE

Sequences:

>Translated_275_residues
MKENMLDILKNLNFTEYESKAYLALLQESPLTGYAVAKKSGVPRSKIYEVLESLVIRGDVFVSHGNTPQYVPVPAKELIK
NRRLKAEEHFDQAEKYFEKFEQTANDRENIWNITGRSEILEKVKACILSAKKRILLEIWKEDFKEIEAELKQAAEQGVIV
TIIAYGDIVSDFANVYLHDMSSEITEEYDGRWLVYSGDDSEVVAGIVSLGNDSRAAWTMHVGLVMPITEVIIHDLYLMEI
LKKHRELLEESFGKNLIQLRRKFSIHSDFKKHYLE
>Mature_275_residues
MKENMLDILKNLNFTEYESKAYLALLQESPLTGYAVAKKSGVPRSKIYEVLESLVIRGDVFVSHGNTPQYVPVPAKELIK
NRRLKAEEHFDQAEKYFEKFEQTANDRENIWNITGRSEILEKVKACILSAKKRILLEIWKEDFKEIEAELKQAAEQGVIV
TIIAYGDIVSDFANVYLHDMSSEITEEYDGRWLVYSGDDSEVVAGIVSLGNDSRAAWTMHVGLVMPITEVIIHDLYLMEI
LKKHRELLEESFGKNLIQLRRKFSIHSDFKKHYLE

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRHO_BACSU (O05405)

Other databases:

- EMBL:   U93874
- EMBL:   AL009126
- PIR:   E69975
- RefSeq:   NP_390589.1
- ProteinModelPortal:   O05405
- EnsemblBacteria:   EBBACT00000002687
- GeneID:   937224
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27110
- NMPDR:   fig|224308.1.peg.2714
- GenoList:   BSU27110
- GeneTree:   EBGT00050000003008
- HOGENOM:   HBG420959
- OMA:   HYAREMI
- ProtClustDB:   CLSK806698
- BioCyc:   BSUB:BSU27110-MONOMER
- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB

EC number: NA

Molecular weight: Translated: 31732; Mature: 31732

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENMLDILKNLNFTEYESKAYLALLQESPLTGYAVAKKSGVPRSKIYEVLESLVIRGDV
CCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCE
FVSHGNTPQYVPVPAKELIKNRRLKAEEHFDQAEKYFEKFEQTANDRENIWNITGRSEIL
EEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHH
EKVKACILSAKKRILLEIWKEDFKEIEAELKQAAEQGVIVTIIAYGDIVSDFANVYLHDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHH
SSEITEEYDGRWLVYSGDDSEVVAGIVSLGNDSRAAWTMHVGLVMPITEVIIHDLYLMEI
HHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
LKKHRELLEESFGKNLIQLRRKFSIHSDFKKHYLE
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKENMLDILKNLNFTEYESKAYLALLQESPLTGYAVAKKSGVPRSKIYEVLESLVIRGDV
CCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCE
FVSHGNTPQYVPVPAKELIKNRRLKAEEHFDQAEKYFEKFEQTANDRENIWNITGRSEIL
EEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHH
EKVKACILSAKKRILLEIWKEDFKEIEAELKQAAEQGVIVTIIAYGDIVSDFANVYLHDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHH
SSEITEEYDGRWLVYSGDDSEVVAGIVSLGNDSRAAWTMHVGLVMPITEVIIHDLYLMEI
HHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
LKKHRELLEESFGKNLIQLRRKFSIHSDFKKHYLE
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377