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The map label for this gene is yraF

Identifier: 16079749

GI number: 16079749

Start: 2753065

End: 2753433

Strand: Direct

Name: yraF

Synonym: BSU26960

Alternate gene names: 16079749

Gene position: 2753065-2753433 (Clockwise)

Preceding gene: 16079748

Following gene: 255767621

Centisome position: 65.31

GC content: 43.63

Gene sequence:

>369_bases
TTGAATAATGATCATTTAGACCCCATTAATTCGCTGAATGTGCCTGAACTAGCAGACACTACATTCGCGATGGATTTTCT
TATACGAGCTAAGGAAGGCGTAAGGAATACTGCTGTAGCTTTGACAGAAACCGCTTCACCAGATGTAAGAGCACTGCTTC
GGAAACAGCTGATGCAAGGAATTGCGATGCACCAAGAGATTACGGAACTGATGATCAGCAAAAAGTGGTTCCATCCATAT
GAGCTGAGCGAACAGTATAAGCTGGATCAGCTCTCTGCAAAAAACACGATCATGGTCGGCAATATGAACCTCTTTCCTGA
TGAAACAAATCGCAAAGGGATGTTTGACCGGACACCTGATGAACACTAA

Upstream 100 bases:

>100_bases
TTACTGAATTACAAGCGGTTTATGAGCGTGCCTCATTTCAGGCCCCTGTCCCTCAAAGCCGCCCAACGCCAATCATCAAT
TGAAAGGGAGGTAAGCCTCT

Downstream 100 bases:

>100_bases
CACTGGAGGTTTTACAGCATGAAGGCAGTAACGTATCAAGGCATTAAAAATGTTGTTGTCAAAGATGTCCCCGATCCAAA
GATTGAAAAATCCGATGACA

Product: spore coat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNNDHLDPINSLNVPELADTTFAMDFLIRAKEGVRNTAVALTETASPDVRALLRKQLMQGIAMHQEITELMISKKWFHPY
ELSEQYKLDQLSAKNTIMVGNMNLFPDETNRKGMFDRTPDEH

Sequences:

>Translated_122_residues
MNNDHLDPINSLNVPELADTTFAMDFLIRAKEGVRNTAVALTETASPDVRALLRKQLMQGIAMHQEITELMISKKWFHPY
ELSEQYKLDQLSAKNTIMVGNMNLFPDETNRKGMFDRTPDEH
>Mature_122_residues
MNNDHLDPINSLNVPELADTTFAMDFLIRAKEGVRNTAVALTETASPDVRALLRKQLMQGIAMHQEITELMISKKWFHPY
ELSEQYKLDQLSAKNTIMVGNMNLFPDETNRKGMFDRTPDEH

Specific function: Unknown

COG id: COG5577

COG function: function code M; Spore coat protein

Gene ontology:

Cell location: Spore wall, spore coat

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRAF_BACSU (O07949)

Other databases:

- EMBL:   X92868
- EMBL:   U93875
- EMBL:   AL009126
- PIR:   F69970
- RefSeq:   NP_390573.1
- ProteinModelPortal:   O07949
- EnsemblBacteria:   EBBACT00000002649
- GeneID:   937606
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26960
- NMPDR:   fig|224308.1.peg.2698
- GenoList:   BSU26960
- GeneTree:   EBGT00050000001940
- HOGENOM:   HBG338582
- OMA:   FAMDFLI
- ProtClustDB:   CLSK887644
- BioCyc:   BSUB:BSU26960-MONOMER
- InterPro:   IPR012851

Pfam domain/function: PF07875 Coat_F

EC number: NA

Molecular weight: Translated: 14006; Mature: 14006

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDHLDPINSLNVPELADTTFAMDFLIRAKEGVRNTAVALTETASPDVRALLRKQLMQG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
IAMHQEITELMISKKWFHPYELSEQYKLDQLSAKNTIMVGNMNLFPDETNRKGMFDRTPD
HHHHHHHHHHHHHHCCCCCCCCCCHHCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
EH
CC
>Mature Secondary Structure
MNNDHLDPINSLNVPELADTTFAMDFLIRAKEGVRNTAVALTETASPDVRALLRKQLMQG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
IAMHQEITELMISKKWFHPYELSEQYKLDQLSAKNTIMVGNMNLFPDETNRKGMFDRTPD
HHHHHHHHHHHHHHCCCCCCCCCCHHCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
EH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141695; 9308178; 9384377