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The map label for this gene is yqcE

Identifier: 16079646

GI number: 16079646

Start: 2666884

End: 2667048

Strand: Reverse

Name: yqcE

Synonym: BSU25930

Alternate gene names: 16079646

Gene position: 2667048-2666884 (Counterclockwise)

Preceding gene: 16079647

Following gene: 16079645

Centisome position: 63.27

GC content: 38.79

Gene sequence:

>165_bases
ATGAATTATTGGGTGCTGGCTTTGCATTATAACTGGGCTTCTTCTGAAATGGTGAAACAGGCAATTCATCTCAAAGATTG
TTCGCCCGAAGATTTACAGGAAGGAATAGAGAAAAAACTCATTACAGCTGAACAGTATAAAGAGATCACAGGAGAAGCCA
TTTAG

Upstream 100 bases:

>100_bases
AACTGGCTCGTAAACAGCTTGAAGAATTAAACCAAACTTTGGGAAGCGAGCTTTCAAAAATAAAGTTGCAACTGCTTACT
CTACAAGGAGGGCAAGGTTC

Downstream 100 bases:

>100_bases
GGCTTTTTTATTTTTCCTTAAAGGAGGTGGTTCCGTTGTAAACCCATGCTCACCACTAATGATCTACAATAGCAAGGAGG
ATTTATAATGGCATCATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MNYWVLALHYNWASSEMVKQAIHLKDCSPEDLQEGIEKKLITAEQYKEITGEAI

Sequences:

>Translated_54_residues
MNYWVLALHYNWASSEMVKQAIHLKDCSPEDLQEGIEKKLITAEQYKEITGEAI
>Mature_54_residues
MNYWVLALHYNWASSEMVKQAIHLKDCSPEDLQEGIEKKLITAEQYKEITGEAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xkdX

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQCE_BACSU (P45940)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   D69949
- RefSeq:   NP_390470.1
- EnsemblBacteria:   EBBACT00000002646
- GeneID:   937759
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25930
- NMPDR:   fig|224308.1.peg.2595
- GenoList:   BSU25930
- GeneTree:   EBGT00050000002151
- HOGENOM:   HBG337935
- ProtClustDB:   CLSK2518223
- BioCyc:   BSUB:BSU25930-MONOMER
- InterPro:   IPR010022
- TIGRFAMs:   TIGR01669

Pfam domain/function: PF09693 Phage_XkdX

EC number: NA

Molecular weight: Translated: 6267; Mature: 6267

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYWVLALHYNWASSEMVKQAIHLKDCSPEDLQEGIEKKLITAEQYKEITGEAI
CCEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure
MNYWVLALHYNWASSEMVKQAIHLKDCSPEDLQEGIEKKLITAEQYKEITGEAI
CCEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895