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The map label for this gene is yqeF

Identifier: 16079623

GI number: 16079623

Start: 2647920

End: 2648651

Strand: Reverse

Name: yqeF

Synonym: BSU25700

Alternate gene names: 16079623

Gene position: 2648651-2647920 (Counterclockwise)

Preceding gene: 16079624

Following gene: 16079622

Centisome position: 62.83

GC content: 43.31

Gene sequence:

>732_bases
ATGAAACATTTTATCATCCTTTTCCTTCTGCTGTTCGTTACAGCAGGATGCGAGGGAAGGGGATACGAAGACGTTGTAGC
ATTTGGTGACAGTAATACGCGTGGCTCTAATTGGGATTATCGCGATTATCCAAAAGCACAGCAGTGGGTCAATATATTAA
AAACAGCTGAGCGCGGTAACCTTGATATACTCAATGCGGGAATCGGCGGACAGACGACAGAGGATGCCCGTCTCCGATTT
CAGACAGATGTGCTGGATCAAAAACCGAAGTATTTGTTTATTATGTTCGGAACCAATGACGCTGCCATACTGACTGAGGG
GAAACCGAGAGTGTCGAAGCAGCGTTTTAGAGAAAATCTGGTTTATTTTATTGAAGAAAGCAGAAAACACGGGATCAAGC
CAATCTTAATGACGTGTATCCCAATTATAGAAGGTAATGGGAAGCATCATTTGTTTTACTATTCCAGATATCAAGCAGCT
GCTTTTGAACCAAAAGGCGGAGCAAGGAAATGGCACAACTCATATAACGATATTACAAGAGATGTGTCGAAGCGCCTGGA
TGTCCCTCTTGTAGATAACTGGAAGCATTTTATAGAAGCAGACGGCGGAAAAGCAACTGATGAAGCGCTTATCCAATCTG
GTCTTATAGATCCTTCTGGAAATCATATGACACCTAAAGGGGCAAGGATCGTATATGAAGGAATACAAGATGGGCAGATC
CTGCAGCGTTGA

Upstream 100 bases:

>100_bases
CACGTTAACTATAGGAAAAAACAGTGATAGCGAAAAACTCTTCATTGAACGAAGAGAAACAGAGGTATAACATTAAAGTG
AGGCTTTTGGGGGTGTAAAG

Downstream 100 bases:

>100_bases
GCCGGACAACCGCCTAGTCCGATTTATTTCTCCTACATAGGCTGTTATAAAACCTTATTAAGGAGGCGCTTCACATGTAT
GGCGCAGGCAGAGCATATGG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKHFIILFLLLFVTAGCEGRGYEDVVAFGDSNTRGSNWDYRDYPKAQQWVNILKTAERGNLDILNAGIGGQTTEDARLRF
QTDVLDQKPKYLFIMFGTNDAAILTEGKPRVSKQRFRENLVYFIEESRKHGIKPILMTCIPIIEGNGKHHLFYYSRYQAA
AFEPKGGARKWHNSYNDITRDVSKRLDVPLVDNWKHFIEADGGKATDEALIQSGLIDPSGNHMTPKGARIVYEGIQDGQI
LQR

Sequences:

>Translated_243_residues
MKHFIILFLLLFVTAGCEGRGYEDVVAFGDSNTRGSNWDYRDYPKAQQWVNILKTAERGNLDILNAGIGGQTTEDARLRF
QTDVLDQKPKYLFIMFGTNDAAILTEGKPRVSKQRFRENLVYFIEESRKHGIKPILMTCIPIIEGNGKHHLFYYSRYQAA
AFEPKGGARKWHNSYNDITRDVSKRLDVPLVDNWKHFIEADGGKATDEALIQSGLIDPSGNHMTPKGARIVYEGIQDGQI
LQR
>Mature_243_residues
MKHFIILFLLLFVTAGCEGRGYEDVVAFGDSNTRGSNWDYRDYPKAQQWVNILKTAERGNLDILNAGIGGQTTEDARLRF
QTDVLDQKPKYLFIMFGTNDAAILTEGKPRVSKQRFRENLVYFIEESRKHGIKPILMTCIPIIEGNGKHHLFYYSRYQAA
AFEPKGGARKWHNSYNDITRDVSKRLDVPLVDNWKHFIEADGGKATDEALIQSGLIDPSGNHMTPKGARIVYEGIQDGQI
LQR

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQEF_BACSU (P54451)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   B69951
- RefSeq:   NP_390447.1
- ProteinModelPortal:   P54451
- SMR:   P54451
- EnsemblBacteria:   EBBACT00000000154
- GeneID:   937814
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25700
- NMPDR:   fig|224308.1.peg.2572
- GenoList:   BSU25700
- GeneTree:   EBGT00050000001018
- HOGENOM:   HBG338188
- OMA:   IMFGTND
- ProtClustDB:   CLSK887609
- BioCyc:   BSUB:BSU25700-MONOMER
- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087
- Gene3D:   G3DSA:3.40.50.1110

Pfam domain/function: PF00657 Lipase_GDSL; SSF52266 Esterase_SGNH_hydro-type

EC number: NA

Molecular weight: Translated: 27640; Mature: 27640

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHFIILFLLLFVTAGCEGRGYEDVVAFGDSNTRGSNWDYRDYPKAQQWVNILKTAERGN
CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
LDILNAGIGGQTTEDARLRFQTDVLDQKPKYLFIMFGTNDAAILTEGKPRVSKQRFRENL
EEEEECCCCCCCCCCHHEEEEHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHH
VYFIEESRKHGIKPILMTCIPIIEGNGKHHLFYYSRYQAAAFEPKGGARKWHNSYNDITR
HHHHHHHHHCCCCHHHHHHHHHEECCCCEEEEEEEEEEEEEECCCCCCHHHHCHHHHHHH
DVSKRLDVPLVDNWKHFIEADGGKATDEALIQSGLIDPSGNHMTPKGARIVYEGIQDGQI
HHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHH
LQR
HCC
>Mature Secondary Structure
MKHFIILFLLLFVTAGCEGRGYEDVVAFGDSNTRGSNWDYRDYPKAQQWVNILKTAERGN
CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
LDILNAGIGGQTTEDARLRFQTDVLDQKPKYLFIMFGTNDAAILTEGKPRVSKQRFRENL
EEEEECCCCCCCCCCHHEEEEHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHH
VYFIEESRKHGIKPILMTCIPIIEGNGKHHLFYYSRYQAAAFEPKGGARKWHNSYNDITR
HHHHHHHHHCCCCHHHHHHHHHEECCCCEEEEEEEEEEEEEECCCCCCHHHHCHHHHHHH
DVSKRLDVPLVDNWKHFIEADGGKATDEALIQSGLIDPSGNHMTPKGARIVYEGIQDGQI
HHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHH
LQR
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377