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The map label for this gene is yqeM

Identifier: 16079615

GI number: 16079615

Start: 2642101

End: 2642844

Strand: Reverse

Name: yqeM

Synonym: BSU25610

Alternate gene names: 16079615

Gene position: 2642844-2642101 (Counterclockwise)

Preceding gene: 16079616

Following gene: 16079613

Centisome position: 62.69

GC content: 44.09

Gene sequence:

>744_bases
ATGATTTATCAAGGCTTTGCAAGCGTGTATGACGAGCTAATGTCACACGCGCCTTACGATCAATGGACAAAATGGATTGA
AGCATCTCTCCCGGAAAAAGGCCGTATTCTCGATCTGGCATGCGGCACGGGGGAAATCTCCATCCGGCTTGCCGAAAAAG
GCTTCGAGGTTACAGGCATCGATCTCAGCGAAGAGATGCTTTCTTTCGCCCAGCAAAAGGTATCGAGTAGCCAGCCTATT
TTATTTCTTCAGCAGGATATGAGAGAGATTACCGGCTTTGACGGTCAATTTGACGCTGTTGTGATATGCTGTGACTCATT
AAATTATTTAAAAACAAAAAATGATGTGATCGAAACCTTTAAAAGTGTTTTTCGGGTATTAAAGCCTGAAGGCATCCTGC
TGTTTGATGTTCATTCATCTTTTAAAATTGCGGAAGTCTTTCCGGATAGCACATTTGCTGACCAGGACGAAGATATCAGC
TATATTTGGCAGAGCTTTGCCGGAAGTGACGAGCTTTCTGTCATTCATGATATGTCGTTTTTTGTGTGGAACGGAGAAGC
GTATGATCGTTTTGATGAGACACACGAGCAAAGAACGTTCCCGGTGGAAGAATACGAAGAAATGCTTAAGAACTGCGGCT
TTCAGCTCCATCGCGTGACAGCTGATTTTACGGATACCGAGCCATCAGCACAATCAGAACGCCTCTTTTTCAAGGCGCAG
AAATCAAAAACCATCGTTTCCTAA

Upstream 100 bases:

>100_bases
TAGTTGTCCATGTCTTCCACAAGGATGAAAGAAGCTACTACAACCTTGAAAAGCTGTGGGGAGACGCTCCGCTCGCAGAT
CTTGACTTTGGAATGAATCA

Downstream 100 bases:

>100_bases
AACGATGGTTTTTTAAAATGCTTTTTTATGCTTTTGCAGTACAGACGAACGTATGACATACTCGTCTACACATGAAACTG
CTTTTTCACTGCGGAAATAT

Product: hypothetical protein

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MIYQGFASVYDELMSHAPYDQWTKWIEASLPEKGRILDLACGTGEISIRLAEKGFEVTGIDLSEEMLSFAQQKVSSSQPI
LFLQQDMREITGFDGQFDAVVICCDSLNYLKTKNDVIETFKSVFRVLKPEGILLFDVHSSFKIAEVFPDSTFADQDEDIS
YIWQSFAGSDELSVIHDMSFFVWNGEAYDRFDETHEQRTFPVEEYEEMLKNCGFQLHRVTADFTDTEPSAQSERLFFKAQ
KSKTIVS

Sequences:

>Translated_247_residues
MIYQGFASVYDELMSHAPYDQWTKWIEASLPEKGRILDLACGTGEISIRLAEKGFEVTGIDLSEEMLSFAQQKVSSSQPI
LFLQQDMREITGFDGQFDAVVICCDSLNYLKTKNDVIETFKSVFRVLKPEGILLFDVHSSFKIAEVFPDSTFADQDEDIS
YIWQSFAGSDELSVIHDMSFFVWNGEAYDRFDETHEQRTFPVEEYEEMLKNCGFQLHRVTADFTDTEPSAQSERLFFKAQ
KSKTIVS
>Mature_247_residues
MIYQGFASVYDELMSHAPYDQWTKWIEASLPEKGRILDLACGTGEISIRLAEKGFEVTGIDLSEEMLSFAQQKVSSSQPI
LFLQQDMREITGFDGQFDAVVICCDSLNYLKTKNDVIETFKSVFRVLKPEGILLFDVHSSFKIAEVFPDSTFADQDEDIS
YIWQSFAGSDELSVIHDMSFFVWNGEAYDRFDETHEQRTFPVEEYEEMLKNCGFQLHRVTADFTDTEPSAQSERLFFKAQ
KSKTIVS

Specific function: May be a S-adenosyl-L-methionine (SAM)-dependent methyltransferase

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQEM_BACSU (P54458)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- EMBL:   L15202
- PIR:   A69952
- RefSeq:   NP_390439.1
- ProteinModelPortal:   P54458
- SMR:   P54458
- EnsemblBacteria:   EBBACT00000001093
- GeneID:   937826
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25610
- NMPDR:   fig|224308.1.peg.2564
- GenoList:   BSU25610
- GeneTree:   EBGT00050000000520
- HOGENOM:   HBG726046
- OMA:   LLLFDVH
- ProtClustDB:   CLSK887605
- BioCyc:   BSUB:BSU25610-MONOMER
- InterPro:   IPR013216

Pfam domain/function: PF08241 Methyltransf_11

EC number: 2.1.1.- [C]

Molecular weight: Translated: 28330; Mature: 28330

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYQGFASVYDELMSHAPYDQWTKWIEASLPEKGRILDLACGTGEISIRLAEKGFEVTGI
CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCEEECC
DLSEEMLSFAQQKVSSSQPILFLQQDMREITGFDGQFDAVVICCDSLNYLKTKNDVIETF
CHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
KSVFRVLKPEGILLFDVHSSFKIAEVFPDSTFADQDEDISYIWQSFAGSDELSVIHDMSF
HHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHEEECEE
FVWNGEAYDRFDETHEQRTFPVEEYEEMLKNCGFQLHRVTADFTDTEPSAQSERLFFKAQ
EEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHEEEEEC
KSKTIVS
CCCCCCC
>Mature Secondary Structure
MIYQGFASVYDELMSHAPYDQWTKWIEASLPEKGRILDLACGTGEISIRLAEKGFEVTGI
CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCEEECC
DLSEEMLSFAQQKVSSSQPILFLQQDMREITGFDGQFDAVVICCDSLNYLKTKNDVIETF
CHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
KSVFRVLKPEGILLFDVHSSFKIAEVFPDSTFADQDEDISYIWQSFAGSDELSVIHDMSF
HHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHEEECEE
FVWNGEAYDRFDETHEQRTFPVEEYEEMLKNCGFQLHRVTADFTDTEPSAQSERLFFKAQ
EEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHEEEEEC
KSKTIVS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 7968523