BacMap

Definition	Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome.
Accession	NC_000964
Length	4,215,606

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The map label for this gene is cshB

Identifier: 16079569

GI number: 16079569

Start: 2594184

End: 2595500

Strand: Reverse

Name: cshB

Synonym: BSU25140

Alternate gene names: 16079569

Gene position: 2595500-2594184 (Counterclockwise)

Preceding gene: 16079572

Following gene: 16079568

Centisome position: 61.57

GC content: 42.67

Gene sequence:

>1317_bases
ATGAAAGAAACGAAATTTGAACTTTATGAATTGAAACCATTTATTATAGATGCAGTACATCGCCTTGGTTTTTACGAACC
GACTGATATCCAGAAAAGGCTGATTCCTGCAGTGTTAAAAAAAGAAAGCGTCATCGGCCAGTCTCAGACGGGTACTGGAA
AGACTCACGCTTATTTACTGCCTTTATTAAACAAAATCGATCCTGCTAAGGATGTCGTTCAGGTAGTCATTACGGCTCCG
ACAAGAGAGCTTGCCAACCAGATTTATCAGGAAGCGCTTAAAATCACGCAGGGTGAAGAAGGAAGTCAGATTCGCTCGAA
ATGTTTTATCGGAGGCACTGATAAACAAAAATCAATTGATAAATTGAAAATACAGCCGCATCTTGTTGTCGGTACACCTG
GACGGATTGCTGACTTAATCAAAGAACAGGCGTTAAGTGTTCATAAAGCGGAATCTCTTGTTATTGATGAAGCGGATTTA
ATGCTGGACATGGGATTCCTTGCAGATGTAGATTACATCGGTTCCCGCATGCCTGAGGATCTGCAAATGCTTGTGTTCTC
AGCGACCATACCGGAAAAGCTGAAACCATTCTTGAAGAAATACATGGAAAATCCGAAATACGCCCATGTGGAGCCAAAAC
AGGTGACTGCTGCGAAAATCGAGCATATCCTCATTCCTTCGAAACATCGTGACAAGGACAAGCTCCTTTTTGACATCATG
TCGCATCTGAATCCATACCTGGGGATTGTGTTTGCCAACACGAAAAATACGGCTGACCATATTGCCCAGTATCTGACTGG
CAAAGGCATGAAAATCGGCTTGCTGCACGGCGGATTAACACCACGTGAGCGGAAAAAAGTCATGAAGCAGATCAATGATT
TGGAATTCACATATATCATTGCAACTGACCTTGCCGCAAGAGGTATTGATATTAAAGGTGTCAGCCATGTTATCAACTAT
GAGCTGCCGGATGATCTCGATTTCTATGTTCACCGTGTGGGCAGAACGGCTCGTGCCGGCTCATCAGGACAAGCGATGAC
CATTTATGAGCTTACTGATGAGGATGCATTAGTAAGACTTGAAAAAATGGGCATCGAATTTGAGTACTTAGAGCTTGAAA
AGGGCGAATGGAAAAAAGGCGATGACCGTCAGCGCCGCAAAAAACGTAAAAAAACGCCGAATGAAGCGGATGAAATTGCT
CATCGTCTCGTGAAAAAGCCGAAGAAGGTTAAGCCTGGGTATAAAAAGAAAATGAGCTATGAGATGGAGAAAATCAAGAA
AAAACAGAGAAGAAACCAATCTAAGAAAAGAAAGTAG

Upstream 100 bases:

>100_bases
CTGAATAAAACAAACGCCTTGCAAACGTGGTGTTTTTAAGCAAAATCGGGTATAATGTGATGATGGACACATAATGTGCC
GCTTTAAGGAGCTGGGAAAA

Downstream 100 bases:

>100_bases
GGGAACCTGTTGCTGAGAATAGGCTCACACGTCTCTATGAGCGGAAAACATATGCTTCTGGCTGCAAGCCAGGAAGCAGT
CTCTTATGGGGCGAATACGT

Product: ATP-dependent RNA helicase; cold shock

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQVVITAP
TRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADL
MLDMGFLADVDYIGSRMPEDLQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFDIM
SHLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYIIATDLAARGIDIKGVSHVINY
ELPDDLDFYVHRVGRTARAGSSGQAMTIYELTDEDALVRLEKMGIEFEYLELEKGEWKKGDDRQRRKKRKKTPNEADEIA
HRLVKKPKKVKPGYKKKMSYEMEKIKKKQRRNQSKKRK

Sequences:

>Translated_438_residues
MKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQVVITAP
TRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADL
MLDMGFLADVDYIGSRMPEDLQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFDIM
SHLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYIIATDLAARGIDIKGVSHVINY
ELPDDLDFYVHRVGRTARAGSSGQAMTIYELTDEDALVRLEKMGIEFEYLELEKGEWKKGDDRQRRKKRKKTPNEADEIA
HRLVKKPKKVKPGYKKKMSYEMEKIKKKQRRNQSKKRK
>Mature_438_residues
MKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQVVITAP
TRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADL
MLDMGFLADVDYIGSRMPEDLQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFDIM
SHLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYIIATDLAARGIDIKGVSHVINY
ELPDDLDFYVHRVGRTARAGSSGQAMTIYELTDEDALVRLEKMGIEFEYLELEKGEWKKGDDRQRRKKRKKTPNEADEIA
HRLVKKPKKVKPGYKKKMSYEMEKIKKKQRRNQSKKRK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain

Homologues:

Organism=Homo sapiens, GI41327771, Length=384, Percent_Identity=32.5520833333333, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI7661920, Length=344, Percent_Identity=32.8488372093023, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI216548263, Length=369, Percent_Identity=33.6043360433604, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI262118318, Length=369, Percent_Identity=33.6043360433604, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI13518015, Length=369, Percent_Identity=33.6043360433604, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI262231852, Length=369, Percent_Identity=33.6043360433604, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI20149629, Length=354, Percent_Identity=34.4632768361582, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI301171467, Length=423, Percent_Identity=31.6784869976359, Blast_Score=195, Evalue=7e-50,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=32.3369565217391, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=32.3369565217391, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI169881239, Length=368, Percent_Identity=32.6086956521739, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI13514809, Length=368, Percent_Identity=32.6086956521739, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI21040371, Length=355, Percent_Identity=31.830985915493, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI164664518, Length=368, Percent_Identity=30.4347826086957, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI222352149, Length=374, Percent_Identity=32.0855614973262, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI4758112, Length=355, Percent_Identity=30.7042253521127, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI18375623, Length=355, Percent_Identity=30.7042253521127, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI21071032, Length=366, Percent_Identity=32.2404371584699, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI4503529, Length=332, Percent_Identity=32.2289156626506, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI83700235, Length=332, Percent_Identity=33.1325301204819, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI50659095, Length=359, Percent_Identity=34.2618384401114, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI224593278, Length=350, Percent_Identity=31.4285714285714, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI4758138, Length=374, Percent_Identity=31.0160427807487, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI31542656, Length=456, Percent_Identity=30.0438596491228, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI45446747, Length=364, Percent_Identity=32.1428571428571, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI45446743, Length=364, Percent_Identity=32.1428571428571, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI148613856, Length=345, Percent_Identity=32.1739130434783, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI38201710, Length=345, Percent_Identity=32.1739130434783, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI13129006, Length=356, Percent_Identity=32.3033707865169, Blast_Score=178, Evalue=8e-45,
Organism=Homo sapiens, GI41327773, Length=343, Percent_Identity=31.7784256559767, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI188035877, Length=346, Percent_Identity=29.7687861271676, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI51094101, Length=353, Percent_Identity=30.028328611898, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI164419743, Length=353, Percent_Identity=30.028328611898, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI256223453, Length=362, Percent_Identity=30.939226519337, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI6005743, Length=357, Percent_Identity=31.0924369747899, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI8922886, Length=357, Percent_Identity=30.812324929972, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI164419732, Length=359, Percent_Identity=30.08356545961, Blast_Score=169, Evalue=7e-42,
Organism=Homo sapiens, GI55749865, Length=358, Percent_Identity=27.9329608938547, Blast_Score=168, Evalue=8e-42,
Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=31.7934782608696, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI13514831, Length=371, Percent_Identity=31.266846361186, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI41327779, Length=372, Percent_Identity=30.6451612903226, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI62241022, Length=341, Percent_Identity=30.791788856305, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI62241024, Length=319, Percent_Identity=30.7210031347962, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI38569505, Length=367, Percent_Identity=28.0653950953678, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI38569503, Length=367, Percent_Identity=28.0653950953678, Blast_Score=142, Evalue=9e-34,
Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=26.7676767676768, Blast_Score=138, Evalue=9e-33,
Organism=Homo sapiens, GI38327634, Length=386, Percent_Identity=27.720207253886, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI17505907, Length=427, Percent_Identity=24.3559718969555, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI9966805, Length=338, Percent_Identity=30.7692307692308, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI256773275, Length=387, Percent_Identity=28.6821705426357, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI154759257, Length=413, Percent_Identity=25.90799031477, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI4826686, Length=109, Percent_Identity=39.4495412844037, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI20336298, Length=198, Percent_Identity=29.2929292929293, Blast_Score=80, Evalue=4e-15,
Organism=Escherichia coli, GI87082221, Length=375, Percent_Identity=34.6666666666667, Blast_Score=232, Evalue=3e-62,
Organism=Escherichia coli, GI1790214, Length=357, Percent_Identity=34.733893557423, Blast_Score=223, Evalue=2e-59,
Organism=Escherichia coli, GI1787016, Length=366, Percent_Identity=35.792349726776, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI1787605, Length=347, Percent_Identity=34.5821325648415, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI1788930, Length=359, Percent_Identity=33.4261838440111, Blast_Score=176, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI71987143, Length=356, Percent_Identity=35.1123595505618, Blast_Score=214, Evalue=6e-56,
Organism=Caenorhabditis elegans, GI71995724, Length=360, Percent_Identity=32.7777777777778, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI17507121, Length=360, Percent_Identity=32.5, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=32.7225130890052, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17537549, Length=356, Percent_Identity=33.9887640449438, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17555296, Length=366, Percent_Identity=33.6065573770492, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=33.0601092896175, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=33.0601092896175, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=33.0601092896175, Blast_Score=191, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI71995718, Length=367, Percent_Identity=33.5149863760218, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17552114, Length=361, Percent_Identity=29.3628808864266, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI71982858, Length=355, Percent_Identity=30.9859154929577, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17552642, Length=367, Percent_Identity=34.0599455040872, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17507945, Length=414, Percent_Identity=29.7101449275362, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI86570094, Length=344, Percent_Identity=32.8488372093023, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI71999646, Length=338, Percent_Identity=29.585798816568, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI71999644, Length=341, Percent_Identity=29.3255131964809, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17507877, Length=375, Percent_Identity=32.2666666666667, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17507881, Length=364, Percent_Identity=31.3186813186813, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17507879, Length=380, Percent_Identity=31.5789473684211, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17510559, Length=374, Percent_Identity=29.144385026738, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI193206561, Length=335, Percent_Identity=29.5522388059701, Blast_Score=167, Evalue=9e-42,
Organism=Caenorhabditis elegans, GI115533224, Length=344, Percent_Identity=30.2325581395349, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI115532548, Length=375, Percent_Identity=29.8666666666667, Blast_Score=162, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI115532546, Length=402, Percent_Identity=28.8557213930348, Blast_Score=161, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI17509811, Length=383, Percent_Identity=28.7206266318538, Blast_Score=159, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=29.3506493506493, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17536099, Length=382, Percent_Identity=29.3193717277487, Blast_Score=154, Evalue=9e-38,
Organism=Caenorhabditis elegans, GI17536101, Length=382, Percent_Identity=29.3193717277487, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17536103, Length=382, Percent_Identity=29.3193717277487, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17553716, Length=372, Percent_Identity=27.4193548387097, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17505370, Length=345, Percent_Identity=31.304347826087, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=29.0666666666667, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=400, Percent_Identity=26.75, Blast_Score=140, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI71990816, Length=372, Percent_Identity=27.1505376344086, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17508543, Length=376, Percent_Identity=26.8617021276596, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI193208216, Length=390, Percent_Identity=28.7179487179487, Blast_Score=121, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI71982862, Length=206, Percent_Identity=33.0097087378641, Blast_Score=118, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17556951, Length=340, Percent_Identity=28.2352941176471, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25148205, Length=325, Percent_Identity=27.0769230769231, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25148291, Length=334, Percent_Identity=24.5508982035928, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71997889, Length=355, Percent_Identity=25.6338028169014, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=36.0824742268041, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=34.6478873239437, Blast_Score=218, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6323021, Length=373, Percent_Identity=34.3163538873995, Blast_Score=204, Evalue=2e-53,
Organism=Saccharomyces cerevisiae, GI6325138, Length=369, Percent_Identity=33.3333333333333, Blast_Score=203, Evalue=5e-53,
Organism=Saccharomyces cerevisiae, GI6324778, Length=371, Percent_Identity=33.1536388140162, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6320224, Length=367, Percent_Identity=33.7874659400545, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6321856, Length=365, Percent_Identity=33.6986301369863, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6320119, Length=368, Percent_Identity=30.4347826086957, Blast_Score=191, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6320041, Length=368, Percent_Identity=30.9782608695652, Blast_Score=187, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6320173, Length=420, Percent_Identity=28.5714285714286, Blast_Score=185, Evalue=9e-48,
Organism=Saccharomyces cerevisiae, GI6324620, Length=390, Percent_Identity=30.7692307692308, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6321360, Length=336, Percent_Identity=34.2261904761905, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6320449, Length=365, Percent_Identity=31.5068493150685, Blast_Score=176, Evalue=7e-45,
Organism=Saccharomyces cerevisiae, GI6322912, Length=360, Percent_Identity=31.9444444444444, Blast_Score=170, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6322323, Length=360, Percent_Identity=31.9444444444444, Blast_Score=170, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6319714, Length=360, Percent_Identity=31.1111111111111, Blast_Score=169, Evalue=9e-43,
Organism=Saccharomyces cerevisiae, GI6321963, Length=365, Percent_Identity=31.5068493150685, Blast_Score=163, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6323947, Length=361, Percent_Identity=32.6869806094183, Blast_Score=162, Evalue=8e-41,
Organism=Saccharomyces cerevisiae, GI6321111, Length=388, Percent_Identity=29.639175257732, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=32.2314049586777, Blast_Score=157, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6320400, Length=384, Percent_Identity=30.7291666666667, Blast_Score=157, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6321267, Length=422, Percent_Identity=30.8056872037915, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=28.5024154589372, Blast_Score=145, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=26.8765133171913, Blast_Score=130, Evalue=4e-31,
Organism=Saccharomyces cerevisiae, GI6322876, Length=411, Percent_Identity=27.7372262773723, Blast_Score=102, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6324366, Length=364, Percent_Identity=26.3736263736264, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6321374, Length=402, Percent_Identity=24.8756218905473, Blast_Score=85, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6323844, Length=362, Percent_Identity=22.0994475138122, Blast_Score=66, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24584994, Length=378, Percent_Identity=34.6560846560847, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24645031, Length=351, Percent_Identity=33.048433048433, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=34.375, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI17985987, Length=389, Percent_Identity=31.6195372750643, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI28574962, Length=363, Percent_Identity=31.9559228650138, Blast_Score=195, Evalue=6e-50,
Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=31.3186813186813, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24644479, Length=355, Percent_Identity=29.8591549295775, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=31.3186813186813, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24644483, Length=355, Percent_Identity=30.1408450704225, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI281361218, Length=355, Percent_Identity=30.1408450704225, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI24644481, Length=355, Percent_Identity=30.1408450704225, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI24644487, Length=355, Percent_Identity=30.1408450704225, Blast_Score=192, Evalue=6e-49,
Organism=Drosophila melanogaster, GI45551833, Length=355, Percent_Identity=30.1408450704225, Blast_Score=192, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24644485, Length=355, Percent_Identity=30.1408450704225, Blast_Score=192, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24582080, Length=328, Percent_Identity=32.6219512195122, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24582078, Length=328, Percent_Identity=32.6219512195122, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI17136248, Length=328, Percent_Identity=32.6219512195122, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24582075, Length=328, Percent_Identity=32.6219512195122, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI21356161, Length=353, Percent_Identity=34.2776203966006, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI21355075, Length=358, Percent_Identity=31.8435754189944, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI24581954, Length=356, Percent_Identity=32.0224719101124, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI24581952, Length=356, Percent_Identity=32.0224719101124, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI24581956, Length=356, Percent_Identity=32.0224719101124, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI17977678, Length=364, Percent_Identity=32.967032967033, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=32.7777777777778, Blast_Score=185, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24662330, Length=360, Percent_Identity=31.1111111111111, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI24642151, Length=346, Percent_Identity=32.9479768786127, Blast_Score=181, Evalue=7e-46,
Organism=Drosophila melanogaster, GI18857967, Length=359, Percent_Identity=30.9192200557103, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI17136814, Length=358, Percent_Identity=32.6815642458101, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI28575014, Length=351, Percent_Identity=30.4843304843305, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI17647335, Length=381, Percent_Identity=30.9711286089239, Blast_Score=165, Evalue=5e-41,
Organism=Drosophila melanogaster, GI21355559, Length=426, Percent_Identity=29.81220657277, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI281365720, Length=317, Percent_Identity=30.9148264984227, Blast_Score=155, Evalue=5e-38,
Organism=Drosophila melanogaster, GI28571808, Length=386, Percent_Identity=29.5336787564767, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI28571809, Length=386, Percent_Identity=29.5336787564767, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24666101, Length=427, Percent_Identity=28.8056206088993, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24643725, Length=386, Percent_Identity=28.2383419689119, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=27.8787878787879, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24642822, Length=398, Percent_Identity=26.8844221105528, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI19920478, Length=347, Percent_Identity=28.2420749279539, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI18859659, Length=435, Percent_Identity=26.2068965517241, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI28571338, Length=435, Percent_Identity=26.2068965517241, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI20130173, Length=443, Percent_Identity=26.6365688487585, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=22.9226361031519, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI17136666, Length=419, Percent_Identity=25.5369928400955, Blast_Score=103, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CSHB_BACSU (P54475)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   D69954
- RefSeq:   NP_390393.1
- ProteinModelPortal:   P54475
- SMR:   P54475
- EnsemblBacteria:   EBBACT00000001897
- GeneID:   937908
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25140
- NMPDR:   fig|224308.1.peg.2518
- GenoList:   BSU25140
- GeneTree:   EBGT00070000031730
- HOGENOM:   HBG737336
- OMA:   QANRRSL
- ProtClustDB:   CLSK2301471
- BioCyc:   BSUB:BSU25140-MONOMER
- GO:   GO:0005737
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR014014
- SMART:   SM00487
- SMART:   SM00490

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C

EC number: =3.6.4.13

Molecular weight: Translated: 50028; Mature: 50028

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00039 DEAD_ATP_HELICASE; PS51192 HELICASE_ATP_BIND_1; PS51194 HELICASE_CTER; PS51195 Q_MOTIF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLL
CCCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
PLLNKIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSID
HHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCCCCHH
KLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPED
HEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCCCHH
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFDIM
HHHHHHHCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SHLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYII
HHCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEE
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQAMTIYELTDEDALVRL
EEHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHCCHHCCCCCCCEEEEEEECCCHHHHHH
EKMGIEFEYLELEKGEWKKGDDRQRRKKRKKTPNEADEIAHRLVKKPKKVKPGYKKKMSY
HHHCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
EMEKIKKKQRRNQSKKRK
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLL
CCCCCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
PLLNKIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSID
HHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCCCCHH
KLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPED
HEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCCCHH
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFDIM
HHHHHHHCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SHLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYII
HHCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEE
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQAMTIYELTDEDALVRL
EEHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHCCHHCCCCCCCEEEEEEECCCHHHHHH
EKMGIEFEYLELEKGEWKKGDDRQRRKKRKKTPNEADEIAHRLVKKPKKVKPGYKKKMSY
HHHCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
EMEKIKKKQRRNQSKKRK
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377