Click here to switch to the map view.

The map label for this gene is qcrA

Identifier: 16079313

GI number: 16079313

Start: 2364589

End: 2365092

Strand: Reverse

Name: qcrA

Synonym: BSU22560

Alternate gene names: 16079313

Gene position: 2365092-2364589 (Counterclockwise)

Preceding gene: 16079314

Following gene: 16079312

Centisome position: 56.1

GC content: 45.63

Gene sequence:

>504_bases
ATGGGCGGAAAACATGATATATCCAGACGTCAATTTTTGAATTATACGCTCACAGGCGTAGGAGGTTTTATGGCGGCTAG
TATGCTCATGCCTATGGTTCGCTTCGCACTCGACCCGGTATTAAAATCGACAGGGAAGCAGGATATGGTTCAGGTTGTCA
GCGTTGATGAGTTGACAAAAGAGCCGCAGCGCTTTGATTTTAAAATTAATCAAGTCGATGCCTGGTATGAGTCAGAAGAG
TCAAGATCAGCCTGGGTCTTCAAAAACGGGGATGAAATTGTAGCACTTTCGCCAATTTGTAAGCATTTAGGGTGTACGGT
GAACTGGAATAGTGATCCTAAAAACCCGAATAAATTCTTTTGTCCATGCCATTACGGACTCTATGAAAAGGACGGCACCA
ATGTCCCTGGCACGCCGCCGCTTGCGCCTCTTGATCATTATGAGCAAGAAGTAAAAGACGGCTTCCTGTATCTTGGAAAA
GCAAAGCCTAAGGGGGAAGGGTGA

Upstream 100 bases:

>100_bases
ACCTTGCTGAGAGATTCATATATTATGAGGGTGTCTAGAGTTATTGCAATATTTTCTATTTTAGTCAGTTTGCAGGGGTG
ACTTAGAGGGGGGAGAAGAG

Downstream 100 bases:

>100_bases
CATGCTGAACAAAATTTATGACTGGGTAGACGAGCGGCTTGATATTACACCGATGTGGAGGGATATTGCCGATCACGAAG
TACCGGAACATGTGAATCCC

Product: menaquinol:cytochrome c oxidoreductase iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MGGKHDISRRQFLNYTLTGVGGFMAASMLMPMVRFALDPVLKSTGKQDMVQVVSVDELTKEPQRFDFKINQVDAWYESEE
SRSAWVFKNGDEIVALSPICKHLGCTVNWNSDPKNPNKFFCPCHYGLYEKDGTNVPGTPPLAPLDHYEQEVKDGFLYLGK
AKPKGEG

Sequences:

>Translated_167_residues
MGGKHDISRRQFLNYTLTGVGGFMAASMLMPMVRFALDPVLKSTGKQDMVQVVSVDELTKEPQRFDFKINQVDAWYESEE
SRSAWVFKNGDEIVALSPICKHLGCTVNWNSDPKNPNKFFCPCHYGLYEKDGTNVPGTPPLAPLDHYEQEVKDGFLYLGK
AKPKGEG
>Mature_166_residues
GGKHDISRRQFLNYTLTGVGGFMAASMLMPMVRFALDPVLKSTGKQDMVQVVSVDELTKEPQRFDFKINQVDAWYESEES
RSAWVFKNGDEIVALSPICKHLGCTVNWNSDPKNPNKFFCPCHYGLYEKDGTNVPGTPPLAPLDHYEQEVKDGFLYLGKA
KPKGEG

Specific function: Component of the menaquinol-cytochrome c reductase complex. The Rieske protein is a high potential 2Fe-2S protein

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): QCRA_BACSU (P46911)

Other databases:

- EMBL:   U25535
- EMBL:   L47709
- EMBL:   AL009126
- PIR:   B69687
- RefSeq:   NP_390137.1
- ProteinModelPortal:   P46911
- SMR:   P46911
- EnsemblBacteria:   EBBACT00000003112
- GeneID:   939017
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22560
- NMPDR:   fig|224308.1.peg.2260
- GenoList:   BSU22560
- GeneTree:   EBGT00050000001493
- HOGENOM:   HBG668715
- OMA:   DAWYESE
- ProtClustDB:   CLSK2752433
- BioCyc:   BSUB:BSU22560-MONOMER
- GO:   GO:0006810
- InterPro:   IPR014909
- InterPro:   IPR017941
- InterPro:   IPR006311
- Gene3D:   G3DSA:2.102.10.10
- TIGRFAMs:   TIGR01409

Pfam domain/function: PF08802 CytB6-F_Fe-S; PF00355 Rieske; SSF50022 Rieske_dom

EC number: 1.10.2.-

Molecular weight: Translated: 18737; Mature: 18605

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51296 RIESKE; PS51318 TAT; PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGKHDISRRQFLNYTLTGVGGFMAASMLMPMVRFALDPVLKSTGKQDMVQVVSVDELTK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
EPQRFDFKINQVDAWYESEESRSAWVFKNGDEIVALSPICKHLGCTVNWNSDPKNPNKFF
CCCCCCEEECCCCCCCCCCCCCCEEEEECCCCEEEECHHHHHCCCEEECCCCCCCCCCEE
CPCHYGLYEKDGTNVPGTPPLAPLDHYEQEVKDGFLYLGKAKPKGEG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCC
>Mature Secondary Structure 
GGKHDISRRQFLNYTLTGVGGFMAASMLMPMVRFALDPVLKSTGKQDMVQVVSVDELTK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
EPQRFDFKINQVDAWYESEESRSAWVFKNGDEIVALSPICKHLGCTVNWNSDPKNPNKFF
CCCCCCEEECCCCCCCCCCCCCCEEEEECCCCEEEECHHHHHCCCEEECCCCCCCCCCEE
CPCHYGLYEKDGTNVPGTPPLAPLDHYEQEVKDGFLYLGKAKPKGEG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592464; 8760912; 9384377