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The map label for this gene is panD

Identifier: 16079298

GI number: 16079298

Start: 2352592

End: 2352975

Strand: Reverse

Name: panD

Synonym: BSU22410

Alternate gene names: 16079298

Gene position: 2352975-2352592 (Counterclockwise)

Preceding gene: 16079299

Following gene: 16079297

Centisome position: 55.82

GC content: 42.19

Gene sequence:

>384_bases
ATGTATCGAACAATGATGAGCGGCAAACTTCACAGGGCAACTGTTACGGAAGCAAACCTGAACTATGTGGGAAGCATTAC
AATTGATGAAGATCTCATTGATGCTGTGGGAATGCTTCCTAATGAAAAAGTACAAATTGTGAATAATAATAATGGAGCAC
GTCTTGAAACGTATATTATTCCTGGTAAACGGGGAAGCGGCGTCATATGCTTAAACGGTGCAGCCGCACGCCTTGTGCAG
GAAGGAGATAAGGTCATTATTATTTCCTACAAAATGATGTCTGATCAAGAAGCGGCAAGCCATGAGCCGAAAGTGGCTGT
TCTGAATGATCAAAACAAAATTGAACAAATGCTGGGGAACGAACCAGCCCGTACAATTTTGTAG

Upstream 100 bases:

>100_bases
ATTGCTGGAAAGATGATTCTCGCTGTTGCAGTTGCTTTTTCAAAAGCGCGTTTAATAGATAATATCATTATTGATATTCG
AGAAATGGAGAGAATATAAT

Downstream 100 bases:

>100_bases
AAGAAAAGCCCCCTTTATCGGGGGTTTTCTTTTAAGATTTTGAGAGTAAAACGGTTTTGCCGCTCCATTTCCGTACAAAA
CGTGTTACACTTTTGTCGTA

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MYRTMMSGKLHRATVTEANLNYVGSITIDEDLIDAVGMLPNEKVQIVNNNNGARLETYIIPGKRGSGVICLNGAAARLVQ
EGDKVIIISYKMMSDQEAASHEPKVAVLNDQNKIEQMLGNEPARTIL

Sequences:

>Translated_127_residues
MYRTMMSGKLHRATVTEANLNYVGSITIDEDLIDAVGMLPNEKVQIVNNNNGARLETYIIPGKRGSGVICLNGAAARLVQ
EGDKVIIISYKMMSDQEAASHEPKVAVLNDQNKIEQMLGNEPARTIL
>Mature_127_residues
MYRTMMSGKLHRATVTEANLNYVGSITIDEDLIDAVGMLPNEKVQIVNNNNGARLETYIIPGKRGSGVICLNGAAARLVQ
EGDKVIIISYKMMSDQEAASHEPKVAVLNDQNKIEQMLGNEPARTIL

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=116, Percent_Identity=48.2758620689655, Blast_Score=115, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 13900; Mature: 13900

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRTMMSGKLHRATVTEANLNYVGSITIDEDLIDAVGMLPNEKVQIVNNNNGARLETYII
CCCCCCCCCEEEEEEEECCCCEEEEEEECHHHHHHHCCCCCCEEEEEECCCCCEEEEEEE
PGKRGSGVICLNGAAARLVQEGDKVIIISYKMMSDQEAASHEPKVAVLNDQNKIEQMLGN
CCCCCCEEEEECCHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHCC
EPARTIL
CCCCCCC
>Mature Secondary Structure
MYRTMMSGKLHRATVTEANLNYVGSITIDEDLIDAVGMLPNEKVQIVNNNNGARLETYII
CCCCCCCCCEEEEEEEECCCCEEEEEEECHHHHHHHCCCCCCEEEEEECCCCCEEEEEEE
PGKRGSGVICLNGAAARLVQEGDKVIIISYKMMSDQEAASHEPKVAVLNDQNKIEQMLGN
CCCCCCEEEEECCHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHCC
EPARTIL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA